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The map label for this gene is yqeK [H]

Identifier: 226950407

GI number: 226950407

Start: 3414689

End: 3415258

Strand: Reverse

Name: yqeK [H]

Synonym: CLM_3378

Alternate gene names: 226950407

Gene position: 3415258-3414689 (Counterclockwise)

Preceding gene: 226950408

Following gene: 226950406

Centisome position: 82.19

GC content: 25.09

Gene sequence:

>570_bases
ATGTGGACTGAGGAACAAATAGATACATATTTAAAAGAAAATTTAAAAGAAGATAGATATAATCATGTAATAAGTGTAAA
AGAAACAGCTGTAAAACTAGCAGAAAAATATAGTGTTGATGTATATAAGGCTAAAATTGCAGCTTTATGTCATGATTGTG
CTAAAAATATGAGTGATAATGAATTATTGAATATGATAAAAGAACATAATATAAATTTAGATTGGATTTCATTAAAAAAT
TTACAAATAACTCATGGATTAGTGGCAACAATAATAATGAGAGAAAAAATGGGAATAGAGGATATAGATATATTAAATGC
AGTAAAATATCATACTACAGGAAGAAATAATATGAGTATGTTAGAAAAAATTATTTATTTAGCAGATATAATAGAACCAT
TAAGGGGATTTAATGGAGTTGAAAGATTAAGAAAATTAGCATTGGTAGATATAGACAAAGCTATGATAGAATCTTTAAAT
TCAACAATACAATATGTGGTTAGTAAAGGAGAACTATTACATATCGATACAGTGATAGCTAGAAATTGCTTAGTAAATGA
TAAATTGTAG

Upstream 100 bases:

>100_bases
AATAATTTATATAAATAATAGGTTTGATATTAAATTATAATTAAATTTATGCATAAATTTAATTTATGTGTTGATTATTT
TCTTTGGGGAGGGGCAAAAT

Downstream 100 bases:

>100_bases
GTGAAATGTTATGGGGAATGATATTAAAAAGAAAAAAAAGACTCGTAAAAGAAAAAAAAGTAGAGGTTTAAAAATTATCA
TTATATTCTTTTCTTTTATT

Product: HDIG domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MWTEEQIDTYLKENLKEDRYNHVISVKETAVKLAEKYSVDVYKAKIAALCHDCAKNMSDNELLNMIKEHNINLDWISLKN
LQITHGLVATIIMREKMGIEDIDILNAVKYHTTGRNNMSMLEKIIYLADIIEPLRGFNGVERLRKLALVDIDKAMIESLN
STIQYVVSKGELLHIDTVIARNCLVNDKL

Sequences:

>Translated_189_residues
MWTEEQIDTYLKENLKEDRYNHVISVKETAVKLAEKYSVDVYKAKIAALCHDCAKNMSDNELLNMIKEHNINLDWISLKN
LQITHGLVATIIMREKMGIEDIDILNAVKYHTTGRNNMSMLEKIIYLADIIEPLRGFNGVERLRKLALVDIDKAMIESLN
STIQYVVSKGELLHIDTVIARNCLVNDKL
>Mature_189_residues
MWTEEQIDTYLKENLKEDRYNHVISVKETAVKLAEKYSVDVYKAKIAALCHDCAKNMSDNELLNMIKEHNINLDWISLKN
LQITHGLVATIIMREKMGIEDIDILNAVKYHTTGRNNMSMLEKIIYLADIIEPLRGFNGVERLRKLALVDIDKAMIESLN
STIQYVVSKGELLHIDTVIARNCLVNDKL

Specific function: Unknown

COG id: COG1713

COG function: function code H; Predicted HD superfamily hydrolase involved in NAD metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005249
- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21717; Mature: 21717

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWTEEQIDTYLKENLKEDRYNHVISVKETAVKLAEKYSVDVYKAKIAALCHDCAKNMSDN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ELLNMIKEHNINLDWISLKNLQITHGLVATIIMREKMGIEDIDILNAVKYHTTGRNNMSM
HHHHHHHHCCCCEEEEEECCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHH
LEKIIYLADIIEPLRGFNGVERLRKLALVDIDKAMIESLNSTIQYVVSKGELLHIDTVIA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH
RNCLVNDKL
HHHHCCCCC
>Mature Secondary Structure
MWTEEQIDTYLKENLKEDRYNHVISVKETAVKLAEKYSVDVYKAKIAALCHDCAKNMSDN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ELLNMIKEHNINLDWISLKNLQITHGLVATIIMREKMGIEDIDILNAVKYHTTGRNNMSM
HHHHHHHHCCCCEEEEEECCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHH
LEKIIYLADIIEPLRGFNGVERLRKLALVDIDKAMIESLNSTIQYVVSKGELLHIDTVIA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH
RNCLVNDKL
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]