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The map label for this gene is yvhJ [H]

Identifier: 226950406

GI number: 226950406

Start: 3413404

End: 3414678

Strand: Reverse

Name: yvhJ [H]

Synonym: CLM_3377

Alternate gene names: 226950406

Gene position: 3414678-3413404 (Counterclockwise)

Preceding gene: 226950407

Following gene: 226950405

Centisome position: 82.18

GC content: 27.84

Gene sequence:

>1275_bases
ATGGGGAATGATATTAAAAAGAAAAAAAAGACTCGTAAAAGAAAAAAAAGTAGAGGTTTAAAAATTATCATTATATTCTT
TTCTTTTATTATACTATTAGGAGTATTGGGGTATTTTTATCTTTTGGGATTTAATCATAATTCAAAATTAGGAGATGGAA
AAATAAATACTAAGAAAGCGGAAGCTGGAGAGCCTGTAAATATACTTGTTATGGGAGTAGATATTGGAGATCCTAATTCT
AAAGATGCATCAGACCCTAAAAGAACAGATACTATGCTTGTAGTTAATTATAATCCTAAAACCAAAAAGATAAATATGGT
ATCCGTACCAAGAGATACTCGTGTAACTATGAATGGCAAAAAAATAAAAATAAATTCAGCTCATGCCATAAATGGAGTAA
ACGGTTCTATAGAAGCTGTAGAAAATCTTTTAGGCATAGAAATAAACAATTATGCTAAGATAGATTATGAAGGATTTAGA
AAGGTTATAGATGCTATAGGGGGAGTAGAGATGGATATAACGAGAAATATGAATTATGATGATCCATCTCAAAATTTACA
CATACATTTTAAAAAGGGCACTACGGTACATTTAGATGGAAAAAAAGCAGAAGAATTTTTTCGATGGAGAAAAAATAACG
ATGGTACAGGTTTTGCAGATGGAGATTTAGGTAGAATAGAAAATCAACATAAATTTATATCAAAGGTAGTGGAAAAAGTC
AAAAGCCCAAGTATAATACCTAAAATTCCAAATATATTAAGCACTATACCAGATTATGTAGAAACAGATATGTCTCCAGA
AGAAATAATTAAATATGGATATGCTGTAACTAAAGGAGATAAATCTGGTATTAATATGGTTACTCTTCAAGGGGAAGCTA
AGTATATAGGTAATATTTCATATTTTATATATGATAGAGAAAAAAATAGAGACATAGTACAGACTTTAAAAACAGGAGTA
ACATCACAAAAAGATGATAGTACTGAGATAGATAAAAGTGAAATTAAAATCAAGGTATTAAATGGAACAAAAGTTAATGG
TTTGGCTGCTGATTGTGAAAGAAAGTTAAAAGAAATGGGATATAGTAACATTATTACAGGTAATGGAGAAAGAAGAGAAT
TAACAAAAGTTCGCCTAAAAAAAGATAGTTTTATATCTACAAGAGAAATAGAAAATTATTTAAATATTCCAAATATAGAG
AAAAATATCCAATCTGATGAAAACTTTGATATAATAATATTATTAGGAAAAGATTTTGCTAATAATAGAAATTAA

Upstream 100 bases:

>100_bases
TCAACAATACAATATGTGGTTAGTAAAGGAGAACTATTACATATCGATACAGTGATAGCTAGAAATTGCTTAGTAAATGA
TAAATTGTAGGTGAAATGTT

Downstream 100 bases:

>100_bases
GAGGAGGATTATTTTATGGAAAAAGTAGTTATAAGTACAAAAAAAGCTCCAGCAGCATTAGGTGCATATTCACAGGCTAT
AAAAATAGGAGACTTATTAT

Product: putative cell envelope-related transcriptional attenuator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MGNDIKKKKKTRKRKKSRGLKIIIIFFSFIILLGVLGYFYLLGFNHNSKLGDGKINTKKAEAGEPVNILVMGVDIGDPNS
KDASDPKRTDTMLVVNYNPKTKKINMVSVPRDTRVTMNGKKIKINSAHAINGVNGSIEAVENLLGIEINNYAKIDYEGFR
KVIDAIGGVEMDITRNMNYDDPSQNLHIHFKKGTTVHLDGKKAEEFFRWRKNNDGTGFADGDLGRIENQHKFISKVVEKV
KSPSIIPKIPNILSTIPDYVETDMSPEEIIKYGYAVTKGDKSGINMVTLQGEAKYIGNISYFIYDREKNRDIVQTLKTGV
TSQKDDSTEIDKSEIKIKVLNGTKVNGLAADCERKLKEMGYSNIITGNGERRELTKVRLKKDSFISTREIENYLNIPNIE
KNIQSDENFDIIILLGKDFANNRN

Sequences:

>Translated_424_residues
MGNDIKKKKKTRKRKKSRGLKIIIIFFSFIILLGVLGYFYLLGFNHNSKLGDGKINTKKAEAGEPVNILVMGVDIGDPNS
KDASDPKRTDTMLVVNYNPKTKKINMVSVPRDTRVTMNGKKIKINSAHAINGVNGSIEAVENLLGIEINNYAKIDYEGFR
KVIDAIGGVEMDITRNMNYDDPSQNLHIHFKKGTTVHLDGKKAEEFFRWRKNNDGTGFADGDLGRIENQHKFISKVVEKV
KSPSIIPKIPNILSTIPDYVETDMSPEEIIKYGYAVTKGDKSGINMVTLQGEAKYIGNISYFIYDREKNRDIVQTLKTGV
TSQKDDSTEIDKSEIKIKVLNGTKVNGLAADCERKLKEMGYSNIITGNGERRELTKVRLKKDSFISTREIENYLNIPNIE
KNIQSDENFDIIILLGKDFANNRN
>Mature_423_residues
GNDIKKKKKTRKRKKSRGLKIIIIFFSFIILLGVLGYFYLLGFNHNSKLGDGKINTKKAEAGEPVNILVMGVDIGDPNSK
DASDPKRTDTMLVVNYNPKTKKINMVSVPRDTRVTMNGKKIKINSAHAINGVNGSIEAVENLLGIEINNYAKIDYEGFRK
VIDAIGGVEMDITRNMNYDDPSQNLHIHFKKGTTVHLDGKKAEEFFRWRKNNDGTGFADGDLGRIENQHKFISKVVEKVK
SPSIIPKIPNILSTIPDYVETDMSPEEIIKYGYAVTKGDKSGINMVTLQGEAKYIGNISYFIYDREKNRDIVQTLKTGVT
SQKDDSTEIDKSEIKIKVLNGTKVNGLAADCERKLKEMGYSNIITGNGERRELTKVRLKKDSFISTREIENYLNIPNIEK
NIQSDENFDIIILLGKDFANNRN

Specific function: Unknown

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 47762; Mature: 47631

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNDIKKKKKTRKRKKSRGLKIIIIFFSFIILLGVLGYFYLLGFNHNSKLGDGKINTKKA
CCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCC
EAGEPVNILVMGVDIGDPNSKDASDPKRTDTMLVVNYNPKTKKINMVSVPRDTRVTMNGK
CCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEECCC
KIKINSAHAINGVNGSIEAVENLLGIEINNYAKIDYEGFRKVIDAIGGVEMDITRNMNYD
EEEEECCEEECCCCCCHHHHHHHHCEEECCEEEECHHHHHHHHHHHCCEEEEEECCCCCC
DPSQNLHIHFKKGTTVHLDGKKAEEFFRWRKNNDGTGFADGDLGRIENQHKFISKVVEKV
CCCCCEEEEEECCCEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
KSPSIIPKIPNILSTIPDYVETDMSPEEIIKYGYAVTKGDKSGINMVTLQGEAKYIGNIS
CCCCCCCCCHHHHHHCHHHHHCCCCHHHHHHHCCEEECCCCCCCEEEEEECCCEEECCEE
YFIYDREKNRDIVQTLKTGVTSQKDDSTEIDKSEIKIKVLNGTKVNGLAADCERKLKEMG
EEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCC
YSNIITGNGERRELTKVRLKKDSFISTREIENYLNIPNIEKNIQSDENFDIIILLGKDFA
CCEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHCCCCCCEEEEEEECCCCC
NNRN
CCCC
>Mature Secondary Structure 
GNDIKKKKKTRKRKKSRGLKIIIIFFSFIILLGVLGYFYLLGFNHNSKLGDGKINTKKA
CCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCC
EAGEPVNILVMGVDIGDPNSKDASDPKRTDTMLVVNYNPKTKKINMVSVPRDTRVTMNGK
CCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEECCC
KIKINSAHAINGVNGSIEAVENLLGIEINNYAKIDYEGFRKVIDAIGGVEMDITRNMNYD
EEEEECCEEECCCCCCHHHHHHHHCEEECCEEEECHHHHHHHHHHHCCEEEEEECCCCCC
DPSQNLHIHFKKGTTVHLDGKKAEEFFRWRKNNDGTGFADGDLGRIENQHKFISKVVEKV
CCCCCEEEEEECCCEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
KSPSIIPKIPNILSTIPDYVETDMSPEEIIKYGYAVTKGDKSGINMVTLQGEAKYIGNIS
CCCCCCCCCHHHHHHCHHHHHCCCCHHHHHHHCCEEECCCCCCCEEEEEECCCEEECCEE
YFIYDREKNRDIVQTLKTGVTSQKDDSTEIDKSEIKIKVLNGTKVNGLAADCERKLKEMG
EEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCC
YSNIITGNGERRELTKVRLKKDSFISTREIENYLNIPNIEKNIQSDENFDIIILLGKDFA
CCEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHCCCCCCEEEEEEECCCCC
NNRN
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]