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The map label for this gene is yqfF [H]

Identifier: 226950375

GI number: 226950375

Start: 3376140

End: 3378227

Strand: Reverse

Name: yqfF [H]

Synonym: CLM_3344

Alternate gene names: 226950375

Gene position: 3378227-3376140 (Counterclockwise)

Preceding gene: 226950376

Following gene: 226950374

Centisome position: 81.3

GC content: 27.68

Gene sequence:

>2088_bases
ATGAAAAAAATTACCATGGAAGAAATAAAAAAGGACAATAAACTAAAGAGAGTATTAGTTTTTTTTATTACATTTTTATT
TATGTATGTTGTGCTTGTCACATCTTTTGTTACCAAAAAATATGACCTACAAGAGGGCGATATAGCTAAAGTTGATATAA
AAGCTCCAAGAGAGATAAAAGATGAAGTATCAACCAAGGCTAGATTGCAACAAGCTTTAGAGTCAGTACCTATACAGTAT
ACTAAAAGAACAGAGGTTAAAGCAGAAATTTTAAATGAAATAAATAGTTTTTTTTCACAGGTAAACTCTCTAAAAGATAA
AAGAATAGATGAAAAACAAAAGGTTCAACAATTAGATCAAAATGGCAAAATAAATATATCAGAAAGGGAATTGAGCCAAA
TATTAAATTTAGATAAATCAGAACTTAAATCCATGCAGGATGTTCTTATTAAAGTTATATCCGATGTTTATGAAAATGTA
AATATAAGTGATGATTCTCAAAAGGATAATGCACAGGATATAAAAAAAGCACAGGAGTATGTATACTCAAAAATAAAAAT
GTCTAAAATAACGAATCCTTTAAGGCAATTGGCAATAAATATAGCTTATTCAGAGATAAAGCCTAATTTTTATTATGATA
AAGAAAAAACGGAGGAATTAAAGAAGGAAACTTTAAAAAATACTCCACCAGTTATGATAAAAAAAGATCAAACAATAGTT
AAAGAAGGAGAACCAGTATCTAAATATCAATTAGATTTGTTAAAGGATATAGGTTTATTAAATAATAATAATAATTTTGA
GTGGTATATTTTTATTGGCCTAGGAGTTCTAATAGTTTTAGTGCTTTTTATACAGTATGTATATATATATAAATTTTATA
ATGAAGTATTTAATGATTTAAATAGTTTGGTTTTAATAAGCTTAAATAATTGTATAGCAATACTTTTAGCTAGGAGCATA
TATACAATATCACCTTTTTTAATTCCTTTAGCATCTATACCTATGATATTAACTTTACTGTTAAACTATAAAATATCTTT
AGTTACTAGTCTTGTAAACTGTATTTTAATAGCTGTAGCAGTAAACTTTGAAGTAGAAATTATTTTAATAGCTATAATGA
GTGCTGTTTTAGGTTCTACTATATTAAGAAAAATGCAAGAAAGAAATGATATACTATATGCATCATCTTATATAGCTATT
ATAAATGTAATCCTTACTTTTTCAGCTGGTTTTCTTTTAAGCAATAGTGTTATAGATGTAAGTAAAAAAGCATTATTTAC
TCTTATAGGAGGAGTGTTATCAGCCATACTAGCCATAGGACTTCTTCCTTTATTTGAAAATTTATTTGATATAGTTACTA
CTATCAAGCTTTTAGAACTTTCCAATCCTAATAATCCACTACTTAAGAAGCTATTATTAGAAGCTCCAGGAACTTATCAT
CACAGTATATTAGTAGGGAATTTAGCTGAGGTTGCAGCAGAGGTTGTAAATGGGAATCCAGTATTAGCTAGAGTATCTGC
TTATTATCATGATATAGGGAAGACTAAAAGACCGTATTTTTTTAAAGAAAATCAAATAGGTAGGGAAAATCCTCATGATA
AAATATCCCCTAATTTAAGTACCTTAATAATTACTTCTCATGTAAAAGATGGGTTAGAATTAGCTAAGGAGTACAAAATA
CCTAAAGTTATACAAGATATAATACAGCAACACCATGGTACATCTTTAGTAAAATATTTTTATATAACCATGAAAAATAA
TAGTGAAAGACCTGAAGATGTAAATGAAGAAGATTTTAGATATCAAGGTCCTATACCTAAAAGTAAAGAAGCTGCTATAA
TAATGCTAGCAGATGGTGTGGAGGCTGCTGTAAGATCTATAAATGAACCCACTAAGGGTAAAATAGAGGAAATGGTAAAT
AAAATAATAAAGGCAAGATTGGATGAAGGACAGTTAGATGATTGTGATCTTACATTAAAAGAGATAGGACTAATAAGAGA
TGCTTTTTTGAAGGTCCTTATAAGTATATATCACCAAAGAATAGAATATCCAGAGGATAAATGGATAAGAGATAGGAGGA
TAAAATGA

Upstream 100 bases:

>100_bases
AGAATGCTAATTATAGCAGAAGAAGATATAGCTGTTCCACAAAAGATAGAAATTACGGATAAAGAAGAAGACAGCTAAAA
TAAAGGTGGTATTATAATAT

Downstream 100 bases:

>100_bases
TATATATAGATAATAGACAGAATAAAATAAAAGTAAATGAAGAGCTTGAAAATAAAATAAAAGAAATAATAGACTATGCA
TTAAAAGAGGAAAAGGTAAA

Product: putative hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 695; Mature: 695

Protein sequence:

>695_residues
MKKITMEEIKKDNKLKRVLVFFITFLFMYVVLVTSFVTKKYDLQEGDIAKVDIKAPREIKDEVSTKARLQQALESVPIQY
TKRTEVKAEILNEINSFFSQVNSLKDKRIDEKQKVQQLDQNGKINISERELSQILNLDKSELKSMQDVLIKVISDVYENV
NISDDSQKDNAQDIKKAQEYVYSKIKMSKITNPLRQLAINIAYSEIKPNFYYDKEKTEELKKETLKNTPPVMIKKDQTIV
KEGEPVSKYQLDLLKDIGLLNNNNNFEWYIFIGLGVLIVLVLFIQYVYIYKFYNEVFNDLNSLVLISLNNCIAILLARSI
YTISPFLIPLASIPMILTLLLNYKISLVTSLVNCILIAVAVNFEVEIILIAIMSAVLGSTILRKMQERNDILYASSYIAI
INVILTFSAGFLLSNSVIDVSKKALFTLIGGVLSAILAIGLLPLFENLFDIVTTIKLLELSNPNNPLLKKLLLEAPGTYH
HSILVGNLAEVAAEVVNGNPVLARVSAYYHDIGKTKRPYFFKENQIGRENPHDKISPNLSTLIITSHVKDGLELAKEYKI
PKVIQDIIQQHHGTSLVKYFYITMKNNSERPEDVNEEDFRYQGPIPKSKEAAIIMLADGVEAAVRSINEPTKGKIEEMVN
KIIKARLDEGQLDDCDLTLKEIGLIRDAFLKVLISIYHQRIEYPEDKWIRDRRIK

Sequences:

>Translated_695_residues
MKKITMEEIKKDNKLKRVLVFFITFLFMYVVLVTSFVTKKYDLQEGDIAKVDIKAPREIKDEVSTKARLQQALESVPIQY
TKRTEVKAEILNEINSFFSQVNSLKDKRIDEKQKVQQLDQNGKINISERELSQILNLDKSELKSMQDVLIKVISDVYENV
NISDDSQKDNAQDIKKAQEYVYSKIKMSKITNPLRQLAINIAYSEIKPNFYYDKEKTEELKKETLKNTPPVMIKKDQTIV
KEGEPVSKYQLDLLKDIGLLNNNNNFEWYIFIGLGVLIVLVLFIQYVYIYKFYNEVFNDLNSLVLISLNNCIAILLARSI
YTISPFLIPLASIPMILTLLLNYKISLVTSLVNCILIAVAVNFEVEIILIAIMSAVLGSTILRKMQERNDILYASSYIAI
INVILTFSAGFLLSNSVIDVSKKALFTLIGGVLSAILAIGLLPLFENLFDIVTTIKLLELSNPNNPLLKKLLLEAPGTYH
HSILVGNLAEVAAEVVNGNPVLARVSAYYHDIGKTKRPYFFKENQIGRENPHDKISPNLSTLIITSHVKDGLELAKEYKI
PKVIQDIIQQHHGTSLVKYFYITMKNNSERPEDVNEEDFRYQGPIPKSKEAAIIMLADGVEAAVRSINEPTKGKIEEMVN
KIIKARLDEGQLDDCDLTLKEIGLIRDAFLKVLISIYHQRIEYPEDKWIRDRRIK
>Mature_695_residues
MKKITMEEIKKDNKLKRVLVFFITFLFMYVVLVTSFVTKKYDLQEGDIAKVDIKAPREIKDEVSTKARLQQALESVPIQY
TKRTEVKAEILNEINSFFSQVNSLKDKRIDEKQKVQQLDQNGKINISERELSQILNLDKSELKSMQDVLIKVISDVYENV
NISDDSQKDNAQDIKKAQEYVYSKIKMSKITNPLRQLAINIAYSEIKPNFYYDKEKTEELKKETLKNTPPVMIKKDQTIV
KEGEPVSKYQLDLLKDIGLLNNNNNFEWYIFIGLGVLIVLVLFIQYVYIYKFYNEVFNDLNSLVLISLNNCIAILLARSI
YTISPFLIPLASIPMILTLLLNYKISLVTSLVNCILIAVAVNFEVEIILIAIMSAVLGSTILRKMQERNDILYASSYIAI
INVILTFSAGFLLSNSVIDVSKKALFTLIGGVLSAILAIGLLPLFENLFDIVTTIKLLELSNPNNPLLKKLLLEAPGTYH
HSILVGNLAEVAAEVVNGNPVLARVSAYYHDIGKTKRPYFFKENQIGRENPHDKISPNLSTLIITSHVKDGLELAKEYKI
PKVIQDIIQQHHGTSLVKYFYITMKNNSERPEDVNEEDFRYQGPIPKSKEAAIIMLADGVEAAVRSINEPTKGKIEEMVN
KIIKARLDEGQLDDCDLTLKEIGLIRDAFLKVLISIYHQRIEYPEDKWIRDRRIK

Specific function: Unknown

COG id: COG1480

COG function: function code R; Predicted membrane-associated HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011624
- InterPro:   IPR011621
- InterPro:   IPR003607
- InterPro:   IPR006675 [H]

Pfam domain/function: PF07698 7TM-7TMR_HD; PF07697 7TMR-HDED [H]

EC number: NA

Molecular weight: Translated: 79337; Mature: 79337

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKITMEEIKKDNKLKRVLVFFITFLFMYVVLVTSFVTKKYDLQEGDIAKVDIKAPREIK
CCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHH
DEVSTKARLQQALESVPIQYTKRTEVKAEILNEINSFFSQVNSLKDKRIDEKQKVQQLDQ
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
NGKINISERELSQILNLDKSELKSMQDVLIKVISDVYENVNISDDSQKDNAQDIKKAQEY
CCCEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
VYSKIKMSKITNPLRQLAINIAYSEIKPNFYYDKEKTEELKKETLKNTPPVMIKKDQTIV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHH
KEGEPVSKYQLDLLKDIGLLNNNNNFEWYIFIGLGVLIVLVLFIQYVYIYKFYNEVFNDL
HCCCCHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSLVLISLNNCIAILLARSIYTISPFLIPLASIPMILTLLLNYKISLVTSLVNCILIAVA
HHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNFEVEIILIAIMSAVLGSTILRKMQERNDILYASSYIAIINVILTFSAGFLLSNSVIDV
HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHH
SKKALFTLIGGVLSAILAIGLLPLFENLFDIVTTIKLLELSNPNNPLLKKLLLEAPGTYH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEE
HSILVGNLAEVAAEVVNGNPVLARVSAYYHDIGKTKRPYFFKENQIGRENPHDKISPNLS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCC
TLIITSHVKDGLELAKEYKIPKVIQDIIQQHHGTSLVKYFYITMKNNSERPEDVNEEDFR
EEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCE
YQGPIPKSKEAAIIMLADGVEAAVRSINEPTKGKIEEMVNKIIKARLDEGQLDDCDLTLK
ECCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH
EIGLIRDAFLKVLISIYHQRIEYPEDKWIRDRRIK
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC
>Mature Secondary Structure
MKKITMEEIKKDNKLKRVLVFFITFLFMYVVLVTSFVTKKYDLQEGDIAKVDIKAPREIK
CCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHH
DEVSTKARLQQALESVPIQYTKRTEVKAEILNEINSFFSQVNSLKDKRIDEKQKVQQLDQ
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
NGKINISERELSQILNLDKSELKSMQDVLIKVISDVYENVNISDDSQKDNAQDIKKAQEY
CCCEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
VYSKIKMSKITNPLRQLAINIAYSEIKPNFYYDKEKTEELKKETLKNTPPVMIKKDQTIV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHH
KEGEPVSKYQLDLLKDIGLLNNNNNFEWYIFIGLGVLIVLVLFIQYVYIYKFYNEVFNDL
HCCCCHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSLVLISLNNCIAILLARSIYTISPFLIPLASIPMILTLLLNYKISLVTSLVNCILIAVA
HHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNFEVEIILIAIMSAVLGSTILRKMQERNDILYASSYIAIINVILTFSAGFLLSNSVIDV
HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHH
SKKALFTLIGGVLSAILAIGLLPLFENLFDIVTTIKLLELSNPNNPLLKKLLLEAPGTYH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEE
HSILVGNLAEVAAEVVNGNPVLARVSAYYHDIGKTKRPYFFKENQIGRENPHDKISPNLS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCC
TLIITSHVKDGLELAKEYKIPKVIQDIIQQHHGTSLVKYFYITMKNNSERPEDVNEEDFR
EEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCE
YQGPIPKSKEAAIIMLADGVEAAVRSINEPTKGKIEEMVNKIIKARLDEGQLDDCDLTLK
ECCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH
EIGLIRDAFLKVLISIYHQRIEYPEDKWIRDRRIK
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]