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The map label for this gene is yqfD [H]

Identifier: 226950376

GI number: 226950376

Start: 3378250

End: 3379410

Strand: Reverse

Name: yqfD [H]

Synonym: CLM_3345

Alternate gene names: 226950376

Gene position: 3379410-3378250 (Counterclockwise)

Preceding gene: 226950377

Following gene: 226950375

Centisome position: 81.33

GC content: 26.36

Gene sequence:

>1161_bases
ATGAAATTTGATAAGTATAAAAATGCTAATATAACAATAGAAATTCAATCTATGATACCAGAGAGATTTATTAACCTTTT
ATGGAAAAATGGTGTGAAAGTTAAAAATGTAGTTAAGACAAGTGTAACTACATTTGTTCTGGATATAGACTTAAAAGATT
ATGCTGTTATGGAGAATATAGCTAGGAGAACAGGAACAAAAGTAAAAATAGTAAAAAGAAAAGGAATCTCTTTTCTTATT
TTATTTTTAAAAAGAAGGTTCTCATTGGTAATAGGTATATTTATTTTTTCTTTTATAATATATTTTATGTCTACATTTAT
ATGGGATATAGATATAACATCAACTAATGGTGTAACACCTTATGAAATAAGACAACAATTAAAAAAATATGGAATAAAGC
CGGGAATAAATAAAAATACTATAGATGTTTATAAGATAGAAGAAAAACTGATTAAGGATATAGATAATATAATGTGGGTA
AAAGCTAGAATTGAGGGAGGGAAACTCGTAGTAAAGGCAGAAGAAAGGCAGTCTCCTCCAACCATAGTGAAAGAGGATGA
ACCTTGCCACTTAGTAGCTAAAAAGGATGGGGAAGTACAAAGGGTATATACTACCTCAGGAAGTGCTATAGTTCAAAATG
GAGATATCGTAAAAAAAGGAGATATTTTAATTAAAGGTGAACAGGGAAAAGAAGGAGAAACTTATGAGGTTCATTCAGAA
GGAAAAGTTTTTGCTAGAACTTTTTACGAAGAAATTAAAACTATAAATACCTATAGAATAAAAAGAAAAAGAACAGGTAA
AAAAATAGATAGAATATATATTAATTTTAAGGGTAAAAAACTATATTTGAAAAAAACTATAAATAAATTTGAAAAATATG
ATAGAATAGAAAATAATAAGTTGTTTATAACAAAAGAAACATTATATGAAGTAAAAGAAACAAAAGAAAATATCAATTTG
AAAAAAGCTATAGATGAAGAGAATGAAAAAATATATAAAAATATAACTAAAAACTTAGATAAATCTGTTAAAATTGTAGA
TAAAATTACGGAGTATTCTCCAGAGGGAGAGAGCTGTAAAATTAGAATGCTAATTATAGCAGAAGAAGATATAGCTGTTC
CACAAAAGATAGAAATTACGGATAAAGAAGAAGACAGCTAA

Upstream 100 bases:

>100_bases
TCTATTTATGGAAAAGATTTTGAGATATTGTTTATGGGAGGAAGTACTATTACTTTGGGAGGAAAATTTAAATCTATAGA
ATATGAAGGGTCTGAAGTAA

Downstream 100 bases:

>100_bases
AATAAAGGTGGTATTATAATATATGAAAAAAATTACCATGGAAGAAATAAAAAAGGACAATAAACTAAAGAGAGTATTAG
TTTTTTTTATTACATTTTTA

Product: sporulation protein YqfD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKFDKYKNANITIEIQSMIPERFINLLWKNGVKVKNVVKTSVTTFVLDIDLKDYAVMENIARRTGTKVKIVKRKGISFLI
LFLKRRFSLVIGIFIFSFIIYFMSTFIWDIDITSTNGVTPYEIRQQLKKYGIKPGINKNTIDVYKIEEKLIKDIDNIMWV
KARIEGGKLVVKAEERQSPPTIVKEDEPCHLVAKKDGEVQRVYTTSGSAIVQNGDIVKKGDILIKGEQGKEGETYEVHSE
GKVFARTFYEEIKTINTYRIKRKRTGKKIDRIYINFKGKKLYLKKTINKFEKYDRIENNKLFITKETLYEVKETKENINL
KKAIDEENEKIYKNITKNLDKSVKIVDKITEYSPEGESCKIRMLIIAEEDIAVPQKIEITDKEEDS

Sequences:

>Translated_386_residues
MKFDKYKNANITIEIQSMIPERFINLLWKNGVKVKNVVKTSVTTFVLDIDLKDYAVMENIARRTGTKVKIVKRKGISFLI
LFLKRRFSLVIGIFIFSFIIYFMSTFIWDIDITSTNGVTPYEIRQQLKKYGIKPGINKNTIDVYKIEEKLIKDIDNIMWV
KARIEGGKLVVKAEERQSPPTIVKEDEPCHLVAKKDGEVQRVYTTSGSAIVQNGDIVKKGDILIKGEQGKEGETYEVHSE
GKVFARTFYEEIKTINTYRIKRKRTGKKIDRIYINFKGKKLYLKKTINKFEKYDRIENNKLFITKETLYEVKETKENINL
KKAIDEENEKIYKNITKNLDKSVKIVDKITEYSPEGESCKIRMLIIAEEDIAVPQKIEITDKEEDS
>Mature_386_residues
MKFDKYKNANITIEIQSMIPERFINLLWKNGVKVKNVVKTSVTTFVLDIDLKDYAVMENIARRTGTKVKIVKRKGISFLI
LFLKRRFSLVIGIFIFSFIIYFMSTFIWDIDITSTNGVTPYEIRQQLKKYGIKPGINKNTIDVYKIEEKLIKDIDNIMWV
KARIEGGKLVVKAEERQSPPTIVKEDEPCHLVAKKDGEVQRVYTTSGSAIVQNGDIVKKGDILIKGEQGKEGETYEVHSE
GKVFARTFYEEIKTINTYRIKRKRTGKKIDRIYINFKGKKLYLKKTINKFEKYDRIENNKLFITKETLYEVKETKENINL
KKAIDEENEKIYKNITKNLDKSVKIVDKITEYSPEGESCKIRMLIIAEEDIAVPQKIEITDKEEDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.megaterium spoIV [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010690 [H]

Pfam domain/function: PF06898 YqfD [H]

EC number: NA

Molecular weight: Translated: 44958; Mature: 44958

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFDKYKNANITIEIQSMIPERFINLLWKNGVKVKNVVKTSVTTFVLDIDLKDYAVMENI
CCCCCCCCCEEEEEEHHHCHHHHHHHHHHCCCEEHHHHHHCEEEEEEEECCHHHHHHHHH
ARRTGTKVKIVKRKGISFLILFLKRRFSLVIGIFIFSFIIYFMSTFIWDIDITSTNGVTP
HHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCH
YEIRQQLKKYGIKPGINKNTIDVYKIEEKLIKDIDNIMWVKARIEGGKLVVKAEERQSPP
HHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHEEEEEEEECCCEEEEEECCCCCCC
TIVKEDEPCHLVAKKDGEVQRVYTTSGSAIVQNGDIVKKGDILIKGEQGKEGETYEVHSE
CCEECCCCCEEEECCCCCEEEEEECCCCEEEECCCEEEECCEEEECCCCCCCCEEEECCC
GKVFARTFYEEIKTINTYRIKRKRTGKKIDRIYINFKGKKLYLKKTINKFEKYDRIENNK
CCHHHHHHHHHHHHHHHEEEEHHHCCCEEEEEEEEEECCEEEHHHHHHHHHHHHCCCCCE
LFITKETLYEVKETKENINLKKAIDEENEKIYKNITKNLDKSVKIVDKITEYSPEGESCK
EEEEHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
IRMLIIAEEDIAVPQKIEITDKEEDS
EEEEEEECCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MKFDKYKNANITIEIQSMIPERFINLLWKNGVKVKNVVKTSVTTFVLDIDLKDYAVMENI
CCCCCCCCCEEEEEEHHHCHHHHHHHHHHCCCEEHHHHHHCEEEEEEEECCHHHHHHHHH
ARRTGTKVKIVKRKGISFLILFLKRRFSLVIGIFIFSFIIYFMSTFIWDIDITSTNGVTP
HHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCH
YEIRQQLKKYGIKPGINKNTIDVYKIEEKLIKDIDNIMWVKARIEGGKLVVKAEERQSPP
HHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHEEEEEEEECCCEEEEEECCCCCCC
TIVKEDEPCHLVAKKDGEVQRVYTTSGSAIVQNGDIVKKGDILIKGEQGKEGETYEVHSE
CCEECCCCCEEEECCCCCEEEEEECCCCEEEECCCEEEECCEEEECCCCCCCCEEEECCC
GKVFARTFYEEIKTINTYRIKRKRTGKKIDRIYINFKGKKLYLKKTINKFEKYDRIENNK
CCHHHHHHHHHHHHHHHEEEEHHHCCCEEEEEEEEEECCEEEHHHHHHHHHHHHCCCCCE
LFITKETLYEVKETKENINLKKAIDEENEKIYKNITKNLDKSVKIVDKITEYSPEGESCK
EEEEHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
IRMLIIAEEDIAVPQKIEITDKEEDS
EEEEEEECCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]