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The map label for this gene is 226950363

Identifier: 226950363

GI number: 226950363

Start: 3361837

End: 3362724

Strand: Reverse

Name: 226950363

Synonym: CLM_3331

Alternate gene names: NA

Gene position: 3362724-3361837 (Counterclockwise)

Preceding gene: 226950364

Following gene: 226950362

Centisome position: 80.93

GC content: 22.41

Gene sequence:

>888_bases
ATGAAGAAATTTAAGCCTATAAGTGGATCAGGACTAATTTCTATAGTGACTAATACTATAATATACAATGCAGCAGTAAT
TTTAATAATGCTTTTAGTAGATTCTTATGAAATAATGGAACTATTAAAAATTTGTTTAATAGGATTGGATATATATTTTA
TTTACTATATATTGATGTATTCTACAGTTGATTATTCTCTAGATAAAGAAAATATCTATATAAATAGTATATTTGGATTA
AAACGGGTTGTAATCCCTATTAAAGAAATACAATGTTATAAAAAGCAATCTGGATATATGAAGAGTATGAGAATATCTGG
ATTTAGTAAATATTATTATGCTATAGGAAGAAATATAATAGATAAGTTAGGTAATACCTATATGTATGTAACATCTAACA
AAAGTATATTATATTTAAAAACAGATAAAATAAATTACGGTATATCTCCTAAGAATTTGGAAAAATTTGAAGTGACATTA
AAACAAGCCGGTATAAAAGAGAGAGATTGGGAATTTAAATTAAATAAAAATACAAATATATTTAAAGATAAAAGATACTT
TACCCCTTTTATAATTGTGACTATTATGATATTAATAATAACTTTAACACCTATGATATTTTATCTATATAATCTTTTAC
CAGACAAAATGCCTCTTGTGTTTGATGCAAAATTTACTCCAGTAGGTTTTGGAGAAGGAAAACAATTTGCCTTTAAACAA
ATGATGTATGGAGCTTTAAATATGGTTATATTATTTTGTATGTATTATGTATCGTACTTTTACTCAAAATATGATAAAAA
TTATGCTTACAAATTTTTATATATATCATTGTTTTTTTCAACAGTATTCTTAATATTTCAAATAAGAATATTATATGTTT
TTTTATAA

Upstream 100 bases:

>100_bases
AAAAATTAAAAGATTATTTAGATTAATGCACCAATATAAGGTGCTTTTTTTTTTTTACTTATAATGATATAATGTTCATG
TAATAAGGTAGGTGATAAAC

Downstream 100 bases:

>100_bases
CATTATAATGTTATAGGATATATAAAATTCTTATTATTTTAAAAGATAAATATAACATATATGCAGGAGTTAAATATGGA
AATAAGTTTAAGACTAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MKKFKPISGSGLISIVTNTIIYNAAVILIMLLVDSYEIMELLKICLIGLDIYFIYYILMYSTVDYSLDKENIYINSIFGL
KRVVIPIKEIQCYKKQSGYMKSMRISGFSKYYYAIGRNIIDKLGNTYMYVTSNKSILYLKTDKINYGISPKNLEKFEVTL
KQAGIKERDWEFKLNKNTNIFKDKRYFTPFIIVTIMILIITLTPMIFYLYNLLPDKMPLVFDAKFTPVGFGEGKQFAFKQ
MMYGALNMVILFCMYYVSYFYSKYDKNYAYKFLYISLFFSTVFLIFQIRILYVFL

Sequences:

>Translated_295_residues
MKKFKPISGSGLISIVTNTIIYNAAVILIMLLVDSYEIMELLKICLIGLDIYFIYYILMYSTVDYSLDKENIYINSIFGL
KRVVIPIKEIQCYKKQSGYMKSMRISGFSKYYYAIGRNIIDKLGNTYMYVTSNKSILYLKTDKINYGISPKNLEKFEVTL
KQAGIKERDWEFKLNKNTNIFKDKRYFTPFIIVTIMILIITLTPMIFYLYNLLPDKMPLVFDAKFTPVGFGEGKQFAFKQ
MMYGALNMVILFCMYYVSYFYSKYDKNYAYKFLYISLFFSTVFLIFQIRILYVFL
>Mature_295_residues
MKKFKPISGSGLISIVTNTIIYNAAVILIMLLVDSYEIMELLKICLIGLDIYFIYYILMYSTVDYSLDKENIYINSIFGL
KRVVIPIKEIQCYKKQSGYMKSMRISGFSKYYYAIGRNIIDKLGNTYMYVTSNKSILYLKTDKINYGISPKNLEKFEVTL
KQAGIKERDWEFKLNKNTNIFKDKRYFTPFIIVTIMILIITLTPMIFYLYNLLPDKMPLVFDAKFTPVGFGEGKQFAFKQ
MMYGALNMVILFCMYYVSYFYSKYDKNYAYKFLYISLFFSTVFLIFQIRILYVFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020482
- ProDom:   PD076125 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34857; Mature: 34857

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFKPISGSGLISIVTNTIIYNAAVILIMLLVDSYEIMELLKICLIGLDIYFIYYILMY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
STVDYSLDKENIYINSIFGLKRVVIPIKEIQCYKKQSGYMKSMRISGFSKYYYAIGRNII
HHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHH
DKLGNTYMYVTSNKSILYLKTDKINYGISPKNLEKFEVTLKQAGIKERDWEFKLNKNTNI
HHHCCEEEEEECCCEEEEEEECCEECCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCE
FKDKRYFTPFIIVTIMILIITLTPMIFYLYNLLPDKMPLVFDAKFTPVGFGEGKQFAFKQ
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHH
MMYGALNMVILFCMYYVSYFYSKYDKNYAYKFLYISLFFSTVFLIFQIRILYVFL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKFKPISGSGLISIVTNTIIYNAAVILIMLLVDSYEIMELLKICLIGLDIYFIYYILMY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
STVDYSLDKENIYINSIFGLKRVVIPIKEIQCYKKQSGYMKSMRISGFSKYYYAIGRNII
HHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHH
DKLGNTYMYVTSNKSILYLKTDKINYGISPKNLEKFEVTLKQAGIKERDWEFKLNKNTNI
HHHCCEEEEEECCCEEEEEEECCEECCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCE
FKDKRYFTPFIIVTIMILIITLTPMIFYLYNLLPDKMPLVFDAKFTPVGFGEGKQFAFKQ
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHH
MMYGALNMVILFCMYYVSYFYSKYDKNYAYKFLYISLFFSTVFLIFQIRILYVFL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11466286; 7961408 [H]