Definition Clostridium botulinum A2 str. Kyoto chromosome, complete genome.
Accession NC_012563
Length 4,155,278

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The map label for this gene is yqfN [H]

Identifier: 226950362

GI number: 226950362

Start: 3361072

End: 3361761

Strand: Reverse

Name: yqfN [H]

Synonym: CLM_3330

Alternate gene names: 226950362

Gene position: 3361761-3361072 (Counterclockwise)

Preceding gene: 226950363

Following gene: 226950361

Centisome position: 80.9

GC content: 26.96

Gene sequence:

>690_bases
ATGGAAATAAGTTTAAGACTAAAAGAAATAGCTAATATGGTAGATAAATGCCAGTCTGTAGTGGATGTAGGCACAGATCA
TGCATACATCCCCATATATTTAATCAAAAATAATATTTGTAAAAGTGCTATAGCAGGAGATATAAATAAAGGTCCCTTAG
ATAGAGCGAAAAACAATATTAATTTTCATAACTTACAAAATAAAATTCAGTGCAGACTAGGGCCAGGGCTTACTAAAATA
CATCCTAAAGAGGTTAATGGTGCTATAATTGCAGGTATGGGTGGACATCTTATAAAAGACATATTAGAAGAATCAAAGGA
AGTTTTTAAAAATTTAGATTTCTTAGTATTACAACCGGTGCAAAATCCAGAGGCGTTAAGAGAATATATATATATTATGG
GATATAAAATATTAAAAGAATCTTTAGTATTTGAGGACAGTAGATTTTATGAAATTATAAAAATAAAATATGATGAAAAT
CATAAATCTGTAGATCCTATATATTATGAAATAGGAGAATATCTTATAAATACTAAACACCCATTAATAAAGAAATTTTT
ATATAACAATATTGACAAATATAAAAAAATACTACAATATATAAGAGAAGACACAGAAAGTGCAGCCTTAAGAAAAGCAG
AAATAAAAGAAAAAATATTTAAATTGGAGGAGCTGGTACAATGTATTTAA

Upstream 100 bases:

>100_bases
AAGAATATTATATGTTTTTTTATAACATTATAATGTTATAGGATATATAAAATTCTTATTATTTTAAAAGATAAATATAA
CATATATGCAGGAGTTAAAT

Downstream 100 bases:

>100_bases
ATGTTAAAAACATAGAAAATATAATAGAAGAATATGCTCCTTTATATTTAAAGGAAAATTACGATAATGTGGGCCTTATG
GTAGGGGATTCAAAAGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MEISLRLKEIANMVDKCQSVVDVGTDHAYIPIYLIKNNICKSAIAGDINKGPLDRAKNNINFHNLQNKIQCRLGPGLTKI
HPKEVNGAIIAGMGGHLIKDILEESKEVFKNLDFLVLQPVQNPEALREYIYIMGYKILKESLVFEDSRFYEIIKIKYDEN
HKSVDPIYYEIGEYLINTKHPLIKKFLYNNIDKYKKILQYIREDTESAALRKAEIKEKIFKLEELVQCI

Sequences:

>Translated_229_residues
MEISLRLKEIANMVDKCQSVVDVGTDHAYIPIYLIKNNICKSAIAGDINKGPLDRAKNNINFHNLQNKIQCRLGPGLTKI
HPKEVNGAIIAGMGGHLIKDILEESKEVFKNLDFLVLQPVQNPEALREYIYIMGYKILKESLVFEDSRFYEIIKIKYDEN
HKSVDPIYYEIGEYLINTKHPLIKKFLYNNIDKYKKILQYIREDTESAALRKAEIKEKIFKLEELVQCI
>Mature_229_residues
MEISLRLKEIANMVDKCQSVVDVGTDHAYIPIYLIKNNICKSAIAGDINKGPLDRAKNNINFHNLQNKIQCRLGPGLTKI
HPKEVNGAIIAGMGGHLIKDILEESKEVFKNLDFLVLQPVQNPEALREYIYIMGYKILKESLVFEDSRFYEIIKIKYDEN
HKSVDPIYYEIGEYLINTKHPLIKKFLYNNIDKYKKILQYIREDTESAALRKAEIKEKIFKLEELVQCI

Specific function: Unknown

COG id: COG2384

COG function: function code R; Predicted SAM-dependent methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006901 [H]

Pfam domain/function: PF04816 DUF633 [H]

EC number: NA

Molecular weight: Translated: 26545; Mature: 26545

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEISLRLKEIANMVDKCQSVVDVGTDHAYIPIYLIKNNICKSAIAGDINKGPLDRAKNNI
CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHCCCCCCCHHHHHCCC
NFHNLQNKIQCRLGPGLTKIHPKEVNGAIIAGMGGHLIKDILEESKEVFKNLDFLVLQPV
CHHHHHHHEEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEECCC
QNPEALREYIYIMGYKILKESLVFEDSRFYEIIKIKYDENHKSVDPIYYEIGEYLINTKH
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCC
PLIKKFLYNNIDKYKKILQYIREDTESAALRKAEIKEKIFKLEELVQCI
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MEISLRLKEIANMVDKCQSVVDVGTDHAYIPIYLIKNNICKSAIAGDINKGPLDRAKNNI
CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHCCCCCCCHHHHHCCC
NFHNLQNKIQCRLGPGLTKIHPKEVNGAIIAGMGGHLIKDILEESKEVFKNLDFLVLQPV
CHHHHHHHEEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEECCC
QNPEALREYIYIMGYKILKESLVFEDSRFYEIIKIKYDENHKSVDPIYYEIGEYLINTKH
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCC
PLIKKFLYNNIDKYKKILQYIREDTESAALRKAEIKEKIFKLEELVQCI
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]