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The map label for this gene is hydA [H]

Identifier: 226950317

GI number: 226950317

Start: 3310751

End: 3312145

Strand: Reverse

Name: hydA [H]

Synonym: CLM_3282

Alternate gene names: 226950317

Gene position: 3312145-3310751 (Counterclockwise)

Preceding gene: 226950318

Following gene: 226950316

Centisome position: 79.71

GC content: 29.1

Gene sequence:

>1395_bases
ATGGCCACTTTAATAAAAAATGGAATTATTGTTACTTCAGGAGATACCTTTAAAGGAGATATTTATATAGAAAATGGTGT
TATAGCTAAAATAGGTATAGGTTTGATTGAAGAGGCTAATGAAATCATTGATGCTAATGGGAAATATGTAATTCCTGGAG
GGGTAGATGTTCATACTCACCTAAACTTAGATGTAGGAATAGCTGTGGCCACAGATGATTTTTATACTGGAACTGTAGCA
GCTGCATGCGGTGGCACTACAAGTATAGTAGATCATTTATCATTCGGACCTAAAGGATGTGATTTACACCATCAAATAAA
TTTATATCATAATTATGCTAAGGGGAATGCAGTTATAGACTATGGGTTTCATGGTGTTATACAACATGTAAACGATAATA
TATTACAAGAACTTGAAGAACTCTCCTATGAAGGAATAACAAGCAATAAAGTCTATTTAACTTATGATTATAAATTAAGT
GATTTAGAAGTATTTAAAGTACTTATGAAATCTAAAGAAATTGGTATACTTACAGCTGTACATCCAGAAAATAATGATAT
GGTTAACTATCTTAGAAAATATTATTCAAGCAATGGTTTTACATCTCCTATATATCATGCAAAAAGTAGACCAGTATGTT
GTGAGGGAGAATCTATAAATAAAATGCTAAATATTGCTAATGTGGCAGGAGATTCTCCTCTGTACATAGTACATCTTTCC
TGTAAATTAGGATTAGATTATATAAAAATGGCTATAGATAGAGGACAAAAAAATGTTTTTACAGAAACATGTCCTCAATA
TCTTTTTTTAGATGAAAGCAAATATAATGGTAAAAATAATGAAGGATTAAAATATGTTATGAGTCCTCCCCTAAGAGAAA
AATCTAATCAAGATGCTTTGTGGAAAGGAATTCAAGATGGATATATACAAGTTATTGCTACAGATCATTGTCCATTTAAC
TTTAATATAGAAAAACAATTAGGGAAAGATAATTTTACTAAATGTCCAAGTGGATCACCTGGAATAGAAACTAGAATTCC
TTTAATTTTTTCAGAGGGAGTTATGAAAAAAAGAATATCCTTAAATAAGTTTATAGATTTAGTAAGTACAAAACCTGCAA
AAATATTTGGATTATATCCCAAAAAAGGAACAATTGCAGTTGGTGCTGATGGAGATATTGTTATAATAGATCCTAATAAA
AAAGTTAAAATTACTAAATCTATGTTACATGAAAATGTTGATTATACTCCTTATGAAGGATTTGAACTTCAGGGTTATCC
AATAATGACAATCTCAAGAGGAAAGATTATAGCAAAAGATAATAAATTCATTGGAGAAAAAGGATACGGCCAATTTTTAA
AAAGAAAAAAGATAGATTTTTTTAATGTTAAATAA

Upstream 100 bases:

>100_bases
GAAAATAGCTATAAAATAGAAGTAGCTGATAAAGAAACAAAAAATATATAAGTTTAAAATCATTTTTCACAATATTCACA
AAAGGAGATGCGATTTTAAG

Downstream 100 bases:

>100_bases
ATAATAATTTTGTGATTATAAAGAACTTTTTGTAGATTCAAAAGGTTCTTTTTTTCTTAATTTATCATAATGATAAGGAA
TATTAATAAATTTGCAATTA

Product: phenylhydantoinase

Products: NA

Alternate protein names: Hydantoin-utilizing enzyme hyuA [H]

Number of amino acids: Translated: 464; Mature: 463

Protein sequence:

>464_residues
MATLIKNGIIVTSGDTFKGDIYIENGVIAKIGIGLIEEANEIIDANGKYVIPGGVDVHTHLNLDVGIAVATDDFYTGTVA
AACGGTTSIVDHLSFGPKGCDLHHQINLYHNYAKGNAVIDYGFHGVIQHVNDNILQELEELSYEGITSNKVYLTYDYKLS
DLEVFKVLMKSKEIGILTAVHPENNDMVNYLRKYYSSNGFTSPIYHAKSRPVCCEGESINKMLNIANVAGDSPLYIVHLS
CKLGLDYIKMAIDRGQKNVFTETCPQYLFLDESKYNGKNNEGLKYVMSPPLREKSNQDALWKGIQDGYIQVIATDHCPFN
FNIEKQLGKDNFTKCPSGSPGIETRIPLIFSEGVMKKRISLNKFIDLVSTKPAKIFGLYPKKGTIAVGADGDIVIIDPNK
KVKITKSMLHENVDYTPYEGFELQGYPIMTISRGKIIAKDNKFIGEKGYGQFLKRKKIDFFNVK

Sequences:

>Translated_464_residues
MATLIKNGIIVTSGDTFKGDIYIENGVIAKIGIGLIEEANEIIDANGKYVIPGGVDVHTHLNLDVGIAVATDDFYTGTVA
AACGGTTSIVDHLSFGPKGCDLHHQINLYHNYAKGNAVIDYGFHGVIQHVNDNILQELEELSYEGITSNKVYLTYDYKLS
DLEVFKVLMKSKEIGILTAVHPENNDMVNYLRKYYSSNGFTSPIYHAKSRPVCCEGESINKMLNIANVAGDSPLYIVHLS
CKLGLDYIKMAIDRGQKNVFTETCPQYLFLDESKYNGKNNEGLKYVMSPPLREKSNQDALWKGIQDGYIQVIATDHCPFN
FNIEKQLGKDNFTKCPSGSPGIETRIPLIFSEGVMKKRISLNKFIDLVSTKPAKIFGLYPKKGTIAVGADGDIVIIDPNK
KVKITKSMLHENVDYTPYEGFELQGYPIMTISRGKIIAKDNKFIGEKGYGQFLKRKKIDFFNVK
>Mature_463_residues
ATLIKNGIIVTSGDTFKGDIYIENGVIAKIGIGLIEEANEIIDANGKYVIPGGVDVHTHLNLDVGIAVATDDFYTGTVAA
ACGGTTSIVDHLSFGPKGCDLHHQINLYHNYAKGNAVIDYGFHGVIQHVNDNILQELEELSYEGITSNKVYLTYDYKLSD
LEVFKVLMKSKEIGILTAVHPENNDMVNYLRKYYSSNGFTSPIYHAKSRPVCCEGESINKMLNIANVAGDSPLYIVHLSC
KLGLDYIKMAIDRGQKNVFTETCPQYLFLDESKYNGKNNEGLKYVMSPPLREKSNQDALWKGIQDGYIQVIATDHCPFNF
NIEKQLGKDNFTKCPSGSPGIETRIPLIFSEGVMKKRISLNKFIDLVSTKPAKIFGLYPKKGTIAVGADGDIVIIDPNKK
VKITKSMLHENVDYTPYEGFELQGYPIMTISRGKIIAKDNKFIGEKGYGQFLKRKKIDFFNVK

Specific function: Catalyzes the stereospecific hydrolysis of the cyclic amide bond of D-hydantoin derivatives with an aromatic side chains at the 5'-position. Has no activity on dihydropyrimidines. The physiological function is unknown [H]

COG id: COG0044

COG function: function code F; Dihydroorotase and related cyclic amidohydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHOase family. Hydantoinase/dihydropyrimidinase subfamily [H]

Homologues:

Organism=Homo sapiens, GI4503379, Length=457, Percent_Identity=36.7614879649891, Blast_Score=281, Evalue=8e-76,
Organism=Homo sapiens, GI4503051, Length=459, Percent_Identity=37.4727668845316, Blast_Score=279, Evalue=5e-75,
Organism=Homo sapiens, GI62422571, Length=459, Percent_Identity=37.4727668845316, Blast_Score=278, Evalue=6e-75,
Organism=Homo sapiens, GI4503377, Length=465, Percent_Identity=36.3440860215054, Blast_Score=277, Evalue=1e-74,
Organism=Homo sapiens, GI4503375, Length=463, Percent_Identity=35.4211663066955, Blast_Score=273, Evalue=3e-73,
Organism=Homo sapiens, GI190194363, Length=465, Percent_Identity=36.5591397849462, Blast_Score=265, Evalue=5e-71,
Organism=Homo sapiens, GI19923821, Length=455, Percent_Identity=34.9450549450549, Blast_Score=249, Evalue=3e-66,
Organism=Homo sapiens, GI18105007, Length=407, Percent_Identity=25.0614250614251, Blast_Score=90, Evalue=5e-18,
Organism=Escherichia coli, GI87082175, Length=457, Percent_Identity=51.8599562363239, Blast_Score=506, Evalue=1e-144,
Organism=Escherichia coli, GI1786722, Length=457, Percent_Identity=32.1663019693654, Blast_Score=189, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI17539558, Length=460, Percent_Identity=36.0869565217391, Blast_Score=264, Evalue=6e-71,
Organism=Caenorhabditis elegans, GI71989490, Length=458, Percent_Identity=34.2794759825328, Blast_Score=248, Evalue=6e-66,
Organism=Caenorhabditis elegans, GI86575075, Length=455, Percent_Identity=28.3516483516484, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI193204318, Length=408, Percent_Identity=25.4901960784314, Blast_Score=107, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6322218, Length=455, Percent_Identity=28.5714285714286, Blast_Score=129, Evalue=1e-30,
Organism=Drosophila melanogaster, GI221377917, Length=459, Percent_Identity=34.640522875817, Blast_Score=251, Evalue=8e-67,
Organism=Drosophila melanogaster, GI17137462, Length=456, Percent_Identity=33.7719298245614, Blast_Score=239, Evalue=2e-63,
Organism=Drosophila melanogaster, GI24644287, Length=308, Percent_Identity=33.4415584415584, Blast_Score=146, Evalue=3e-35,
Organism=Drosophila melanogaster, GI24644289, Length=229, Percent_Identity=34.4978165938865, Blast_Score=126, Evalue=4e-29,
Organism=Drosophila melanogaster, GI24642586, Length=412, Percent_Identity=27.1844660194175, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI18859883, Length=255, Percent_Identity=24.7058823529412, Blast_Score=91, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680
- InterPro:   IPR011778
- InterPro:   IPR011059 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: 3.-.-.- [C]

Molecular weight: Translated: 51575; Mature: 51444

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLIKNGIIVTSGDTFKGDIYIENGVIAKIGIGLIEEANEIIDANGKYVIPGGVDVHTH
CCCEEECCEEEECCCCEEEEEEEECCEEEEECCHHHHHHHHHCCCCCCEEECCCEEEEEE
LNLDVGIAVATDDFYTGTVAAACGGTTSIVDHLSFGPKGCDLHHQINLYHNYAKGNAVID
EEEEEEEEEEECCCCCCEEHHHCCCHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCEEEE
YGFHGVIQHVNDNILQELEELSYEGITSNKVYLTYDYKLSDLEVFKVLMKSKEIGILTAV
ECHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECEECHHHHHHHHHCCCCCEEEEEE
HPENNDMVNYLRKYYSSNGFTSPIYHAKSRPVCCEGESINKMLNIANVAGDSPLYIVHLS
CCCCCHHHHHHHHHHCCCCCCCCCEECCCCCEEECCHHHHHHHHHHHCCCCCCEEEEEEE
CKLGLDYIKMAIDRGQKNVFTETCPQYLFLDESKYNGKNNEGLKYVMSPPLREKSNQDAL
ECCCHHHHHHHHHCCCCCCHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCHH
WKGIQDGYIQVIATDHCPFNFNIEKQLGKDNFTKCPSGSPGIETRIPLIFSEGVMKKRIS
HHCCCCCEEEEEEECCCCCCEEHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHH
LNKFIDLVSTKPAKIFGLYPKKGTIAVGADGDIVIIDPNKKVKITKSMLHENVDYTPYEG
HHHHHHHHCCCCCEEEEECCCCCEEEECCCCCEEEECCCCCEEEEHHHHHCCCCCCCCCC
FELQGYPIMTISRGKIIAKDNKFIGEKGYGQFLKRKKIDFFNVK
EEECCEEEEEEECCEEEEECCCCCCCCCHHHHHHHCCCCEECCC
>Mature Secondary Structure 
ATLIKNGIIVTSGDTFKGDIYIENGVIAKIGIGLIEEANEIIDANGKYVIPGGVDVHTH
CCEEECCEEEECCCCEEEEEEEECCEEEEECCHHHHHHHHHCCCCCCEEECCCEEEEEE
LNLDVGIAVATDDFYTGTVAAACGGTTSIVDHLSFGPKGCDLHHQINLYHNYAKGNAVID
EEEEEEEEEEECCCCCCEEHHHCCCHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCEEEE
YGFHGVIQHVNDNILQELEELSYEGITSNKVYLTYDYKLSDLEVFKVLMKSKEIGILTAV
ECHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECEECHHHHHHHHHCCCCCEEEEEE
HPENNDMVNYLRKYYSSNGFTSPIYHAKSRPVCCEGESINKMLNIANVAGDSPLYIVHLS
CCCCCHHHHHHHHHHCCCCCCCCCEECCCCCEEECCHHHHHHHHHHHCCCCCCEEEEEEE
CKLGLDYIKMAIDRGQKNVFTETCPQYLFLDESKYNGKNNEGLKYVMSPPLREKSNQDAL
ECCCHHHHHHHHHCCCCCCHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCHH
WKGIQDGYIQVIATDHCPFNFNIEKQLGKDNFTKCPSGSPGIETRIPLIFSEGVMKKRIS
HHCCCCCEEEEEEECCCCCCEEHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHH
LNKFIDLVSTKPAKIFGLYPKKGTIAVGADGDIVIIDPNKKVKITKSMLHENVDYTPYEG
HHHHHHHHCCCCCEEEEECCCCCEEEECCCCCEEEECCCCCEEEEHHHHHCCCCCCCCCC
FELQGYPIMTISRGKIIAKDNKFIGEKGYGQFLKRKKIDFFNVK
EEECCEEEEEEECCEEEEECCCCCCCCCHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA