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The map label for this gene is ygeW [H]

Identifier: 226950316

GI number: 226950316

Start: 3309213

End: 3310409

Strand: Reverse

Name: ygeW [H]

Synonym: CLM_3281

Alternate gene names: 226950316

Gene position: 3310409-3309213 (Counterclockwise)

Preceding gene: 226950317

Following gene: 226950315

Centisome position: 79.67

GC content: 32.83

Gene sequence:

>1197_bases
ATGCAAGATATTAAAAAATTAATTGAAGAACTAAAGAATATTGAATTTGGAAAAATGTACAATAATGATTTTTTCCTAAC
TTGGGAAAAGACTGATGATGAACTTAAAGCCGTATTTACAGTAGCAGATATTTTACGAAAAATGAGAGAAAACAACATAT
CTACAAAGATATTTGATAGTGGATTGGGAATTTCAGTATTCCGTGATAATTCAACAAGAACAAGATTTAGTTTTGCAAGC
GCATGTAACTTATTAGGATTAGAAGTTCAGGATTTAGATGAAGGAAAGTCACAAATTGCTCATGGCGAAACAGTACGTGA
AACAGCAAATATGATTTCCTTTATGGCTGATGTTATAGGTATTAGGGATGATATGTTTATAGGTAAAGGAAATAAATATA
TGCATGAAGTATCTGATGCAATTCAGGAGGGATACAAATCAGGAGTTTTAGAACAACGCCCTACACTTGTAAATCTTCAA
TGTGATATAGATCATCCAACTCAATGTATGGCAGATTTACTTCACATGATCCATTATTTTGGAGGAGTAGAAAATCTTAA
AGGTAAAAAAGTAGCTATGTCTTGGGCATATTCACCATCTTATGGTAAGCCACTTTCAGTTCCTCAAGGTGTAGTAGGTT
TAATGACAAGAATGGGAATGGAAGTTGTACTTGCTCATCCAGAGGGATATGATTTAATGCCTGAAGTAGAAGAGGTAGCA
AGAAAAAATGCTAAAGCAAGTGGTGGTAAGTTTACAAAAACTAATTCAATGAAAGAAGCTTTTGAAAATGCAGATGTAGT
ATATCCTAAGAGTTGGGCACCTTTTGCATTTATGGAAAGACGTACAAACCTATATGGAGAAGGCAAGTTTAAAGAAATAG
ACGTTCTAGAAAAAGAATTATTAGAAGAAAATGCTAAACATAAAGATTGGGAATGTACAGAGGAAATGATGAAACTTACT
AAAGATGAAAAAGCATTATATCTACACTGTTTACCAGCGGATATTACTGGAGTTAGTTGCGAGGAAGGAGAGGTAGCTGA
ATCAGTATTTGATCGTTATCGTGAGCCACTTTACAAAGAAGCTGGTTATAAACCTTATATTATTGCAGCAATGATGTTCT
TGAGTAAAGTTAAGAATCCAGCTCTAAAGTTTGAAAAACTTATAAAAGAAAATAATCCAAGATTTTATGGAAAATAA

Upstream 100 bases:

>100_bases
ATAGTAAAGGAGGATATAAAAGGTAAAAAGGAAATGTAGAATTTTAATTAATTTAGTATGTAAATTTAAAATTTAATTAT
AAAAAATAGGAGGCGTATTT

Downstream 100 bases:

>100_bases
TTAAAAATATAAATTAAGTAAGGGGGAAGATTTATATGGGTGATAAGATGCGACCAATTTCTTTAAAAAAAATGATTACA
TGGACTATGGAAGAGTTAAA

Product: aspartate/ornithine carbamoyltransferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MQDIKKLIEELKNIEFGKMYNNDFFLTWEKTDDELKAVFTVADILRKMRENNISTKIFDSGLGISVFRDNSTRTRFSFAS
ACNLLGLEVQDLDEGKSQIAHGETVRETANMISFMADVIGIRDDMFIGKGNKYMHEVSDAIQEGYKSGVLEQRPTLVNLQ
CDIDHPTQCMADLLHMIHYFGGVENLKGKKVAMSWAYSPSYGKPLSVPQGVVGLMTRMGMEVVLAHPEGYDLMPEVEEVA
RKNAKASGGKFTKTNSMKEAFENADVVYPKSWAPFAFMERRTNLYGEGKFKEIDVLEKELLEENAKHKDWECTEEMMKLT
KDEKALYLHCLPADITGVSCEEGEVAESVFDRYREPLYKEAGYKPYIIAAMMFLSKVKNPALKFEKLIKENNPRFYGK

Sequences:

>Translated_398_residues
MQDIKKLIEELKNIEFGKMYNNDFFLTWEKTDDELKAVFTVADILRKMRENNISTKIFDSGLGISVFRDNSTRTRFSFAS
ACNLLGLEVQDLDEGKSQIAHGETVRETANMISFMADVIGIRDDMFIGKGNKYMHEVSDAIQEGYKSGVLEQRPTLVNLQ
CDIDHPTQCMADLLHMIHYFGGVENLKGKKVAMSWAYSPSYGKPLSVPQGVVGLMTRMGMEVVLAHPEGYDLMPEVEEVA
RKNAKASGGKFTKTNSMKEAFENADVVYPKSWAPFAFMERRTNLYGEGKFKEIDVLEKELLEENAKHKDWECTEEMMKLT
KDEKALYLHCLPADITGVSCEEGEVAESVFDRYREPLYKEAGYKPYIIAAMMFLSKVKNPALKFEKLIKENNPRFYGK
>Mature_398_residues
MQDIKKLIEELKNIEFGKMYNNDFFLTWEKTDDELKAVFTVADILRKMRENNISTKIFDSGLGISVFRDNSTRTRFSFAS
ACNLLGLEVQDLDEGKSQIAHGETVRETANMISFMADVIGIRDDMFIGKGNKYMHEVSDAIQEGYKSGVLEQRPTLVNLQ
CDIDHPTQCMADLLHMIHYFGGVENLKGKKVAMSWAYSPSYGKPLSVPQGVVGLMTRMGMEVVLAHPEGYDLMPEVEEVA
RKNAKASGGKFTKTNSMKEAFENADVVYPKSWAPFAFMERRTNLYGEGKFKEIDVLEKELLEENAKHKDWECTEEMMKLT
KDEKALYLHCLPADITGVSCEEGEVAESVFDRYREPLYKEAGYKPYIIAAMMFLSKVKNPALKFEKLIKENNPRFYGK

Specific function: Unknown

COG id: COG0078

COG function: function code E; Ornithine carbamoyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATCase/OTCase family [H]

Homologues:

Organism=Homo sapiens, GI38788445, Length=312, Percent_Identity=23.7179487179487, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI48994908, Length=394, Percent_Identity=65.2284263959391, Blast_Score=553, Evalue=1e-158,
Organism=Escherichia coli, GI1786469, Length=373, Percent_Identity=26.0053619302949, Blast_Score=77, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6322373, Length=310, Percent_Identity=23.5483870967742, Blast_Score=63, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006132
- InterPro:   IPR006130
- InterPro:   IPR006131
- InterPro:   IPR002082
- InterPro:   IPR017702 [H]

Pfam domain/function: PF00185 OTCace; PF02729 OTCace_N [H]

EC number: NA

Molecular weight: Translated: 45355; Mature: 45355

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDIKKLIEELKNIEFGKMYNNDFFLTWEKTDDELKAVFTVADILRKMRENNISTKIFDS
CHHHHHHHHHHHCCCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEECC
GLGISVFRDNSTRTRFSFASACNLLGLEVQDLDEGKSQIAHGETVRETANMISFMADVIG
CCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
IRDDMFIGKGNKYMHEVSDAIQEGYKSGVLEQRPTLVNLQCDIDHPTQCMADLLHMIHYF
CCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
GGVENLKGKKVAMSWAYSPSYGKPLSVPQGVVGLMTRMGMEVVLAHPEGYDLMPEVEEVA
CCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHH
RKNAKASGGKFTKTNSMKEAFENADVVYPKSWAPFAFMERRTNLYGEGKFKEIDVLEKEL
HHCCCCCCCCCCCCHHHHHHHCCCCEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH
LEENAKHKDWECTEEMMKLTKDEKALYLHCLPADITGVSCEEGEVAESVFDRYREPLYKE
HHHCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
AGYKPYIIAAMMFLSKVKNPALKFEKLIKENNPRFYGK
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQDIKKLIEELKNIEFGKMYNNDFFLTWEKTDDELKAVFTVADILRKMRENNISTKIFDS
CHHHHHHHHHHHCCCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEECC
GLGISVFRDNSTRTRFSFASACNLLGLEVQDLDEGKSQIAHGETVRETANMISFMADVIG
CCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
IRDDMFIGKGNKYMHEVSDAIQEGYKSGVLEQRPTLVNLQCDIDHPTQCMADLLHMIHYF
CCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
GGVENLKGKKVAMSWAYSPSYGKPLSVPQGVVGLMTRMGMEVVLAHPEGYDLMPEVEEVA
CCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHH
RKNAKASGGKFTKTNSMKEAFENADVVYPKSWAPFAFMERRTNLYGEGKFKEIDVLEKEL
HHCCCCCCCCCCCCHHHHHHHCCCCEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH
LEENAKHKDWECTEEMMKLTKDEKALYLHCLPADITGVSCEEGEVAESVFDRYREPLYKE
HHHCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
AGYKPYIIAAMMFLSKVKNPALKFEKLIKENNPRFYGK
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]