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The map label for this gene is yabE [H]

Identifier: 226950220

GI number: 226950220

Start: 3186842

End: 3187867

Strand: Reverse

Name: yabE [H]

Synonym: CLM_3174

Alternate gene names: 226950220

Gene position: 3187867-3186842 (Counterclockwise)

Preceding gene: 226950221

Following gene: 226950219

Centisome position: 76.72

GC content: 31.48

Gene sequence:

>1026_bases
TTGAATAAAAAAGTTTTATCTTTTATTATAATGTTAAATTTAATTTTAAGTATAGGCAGCAATGTTTTGGCTGCACCATC
TATTAAGGAATCCGATGACTTAAAAGAAACCAGGGAGCAGAAAAAACAAATACAGCAAAGAGTTGAAAAAATGGACAGCG
AAATTGATAGTGTAATAAATGAAATTGATAAAAATAAGCAACTTATGAATAAGGTTAATAAAGACGTTAAAGATACAGAG
AATAAATTGAATCAAGTAAAAAATAATGTAAAAGAAAAAGAAGATTTGTTTGGCAAGAGAGTAAGAGCTATGTATATAAG
TGGTGGAGATAGCTATCTAGATATACTTTTAGGCTCAGAAAATTTAAGTGACTTTATGTCAAGGGTAGATACAGTTTCAA
AAGTAATGAAATTTGATATAAATGTTGTTACTAAGTTAAAGGAAGAAAAAGAGGCTATAGCAAAACAAAAAGAAAATTTA
GATCAGGAGAAGAATAAATTATCAGCTTTAAAGAAAAATAATGAAGTTGCTTTATTAAGATTGAATAAGAATGTAGAAGA
AGAAAAGAGAGCTCTTAATAAAGTAAATGAAAAGGAAAGTGAATTAGTAGCTAATGAAGCTGCAAGGGCTGAGGAGGCTA
GAAAAGCTGAAGAGAATAGTAAAAAAGCTAAAGAGGTAGCAGCCAGTAATAGTAATAGTTCAAAGGGGCAAACTTTATCC
CGTGGTGAATCAAATTCTACGTCCTATTCAAAAGTAATGGTAATGGAAGCCACTGCTTATGCAGGGGATGGAATAACTGC
TTCAGGGAACGGAACAAATAGAAATCCCAATGGATATAGTACTATAGCTGTAGATCCTAGAGTAATACCTTTGGGATCTA
GAGTTTATGTAGAAGGTTATGGATATGCTATTGCACATGATACTGGCGGTGATATTAAAGGTAATAGAATAGATTTGTTT
ATGAACTCAGAGGCTGAGTGTAATAGTTGGGGAAGAAGAAGTGTAAAAGTTTATATACTAGGATAG

Upstream 100 bases:

>100_bases
CTTACTTCCGTATTATAAAATAGGAAGTATTAGAATTGTAAAGCATAGAATAAATATAGTAGATTTTATATTTATAGATA
ATTTATAGGAGAGTGATAAA

Downstream 100 bases:

>100_bases
TAATATATTTTTATTTTAGAGGCAAATAAAACTTATAAAAATTATTTTATTTGTAGTAATAAATAGTAGTAATTAATTTA
TGTAGAATAATATTATTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MNKKVLSFIIMLNLILSIGSNVLAAPSIKESDDLKETREQKKQIQQRVEKMDSEIDSVINEIDKNKQLMNKVNKDVKDTE
NKLNQVKNNVKEKEDLFGKRVRAMYISGGDSYLDILLGSENLSDFMSRVDTVSKVMKFDINVVTKLKEEKEAIAKQKENL
DQEKNKLSALKKNNEVALLRLNKNVEEEKRALNKVNEKESELVANEAARAEEARKAEENSKKAKEVAASNSNSSKGQTLS
RGESNSTSYSKVMVMEATAYAGDGITASGNGTNRNPNGYSTIAVDPRVIPLGSRVYVEGYGYAIAHDTGGDIKGNRIDLF
MNSEAECNSWGRRSVKVYILG

Sequences:

>Translated_341_residues
MNKKVLSFIIMLNLILSIGSNVLAAPSIKESDDLKETREQKKQIQQRVEKMDSEIDSVINEIDKNKQLMNKVNKDVKDTE
NKLNQVKNNVKEKEDLFGKRVRAMYISGGDSYLDILLGSENLSDFMSRVDTVSKVMKFDINVVTKLKEEKEAIAKQKENL
DQEKNKLSALKKNNEVALLRLNKNVEEEKRALNKVNEKESELVANEAARAEEARKAEENSKKAKEVAASNSNSSKGQTLS
RGESNSTSYSKVMVMEATAYAGDGITASGNGTNRNPNGYSTIAVDPRVIPLGSRVYVEGYGYAIAHDTGGDIKGNRIDLF
MNSEAECNSWGRRSVKVYILG
>Mature_341_residues
MNKKVLSFIIMLNLILSIGSNVLAAPSIKESDDLKETREQKKQIQQRVEKMDSEIDSVINEIDKNKQLMNKVNKDVKDTE
NKLNQVKNNVKEKEDLFGKRVRAMYISGGDSYLDILLGSENLSDFMSRVDTVSKVMKFDINVVTKLKEEKEAIAKQKENL
DQEKNKLSALKKNNEVALLRLNKNVEEEKRALNKVNEKESELVANEAARAEEARKAEENSKKAKEVAASNSNSSKGQTLS
RGESNSTSYSKVMVMEATAYAGDGITASGNGTNRNPNGYSTIAVDPRVIPLGSRVYVEGYGYAIAHDTGGDIKGNRIDLF
MNSEAECNSWGRRSVKVYILG

Specific function: Unknown

COG id: COG3883

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G5 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR007137
- InterPro:   IPR011098 [H]

Pfam domain/function: PF06725 3D; PF03990 DUF348; PF07501 G5 [H]

EC number: NA

Molecular weight: Translated: 37953; Mature: 37953

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKVLSFIIMLNLILSIGSNVLAAPSIKESDDLKETREQKKQIQQRVEKMDSEIDSVIN
CCHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIDKNKQLMNKVNKDVKDTENKLNQVKNNVKEKEDLFGKRVRAMYISGGDSYLDILLGSE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEECCC
NLSDFMSRVDTVSKVMKFDINVVTKLKEEKEAIAKQKENLDQEKNKLSALKKNNEVALLR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
LNKNVEEEKRALNKVNEKESELVANEAARAEEARKAEENSKKAKEVAASNSNSSKGQTLS
ECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RGESNSTSYSKVMVMEATAYAGDGITASGNGTNRNPNGYSTIAVDPRVIPLGSRVYVEGY
CCCCCCCCHHEEEEEEEEEECCCCEEECCCCCCCCCCCCEEEEECCEEEECCCEEEEEEC
GYAIAHDTGGDIKGNRIDLFMNSEAECNSWGRRSVKVYILG
CEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MNKKVLSFIIMLNLILSIGSNVLAAPSIKESDDLKETREQKKQIQQRVEKMDSEIDSVIN
CCHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIDKNKQLMNKVNKDVKDTENKLNQVKNNVKEKEDLFGKRVRAMYISGGDSYLDILLGSE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEECCC
NLSDFMSRVDTVSKVMKFDINVVTKLKEEKEAIAKQKENLDQEKNKLSALKKNNEVALLR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
LNKNVEEEKRALNKVNEKESELVANEAARAEEARKAEENSKKAKEVAASNSNSSKGQTLS
ECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RGESNSTSYSKVMVMEATAYAGDGITASGNGTNRNPNGYSTIAVDPRVIPLGSRVYVEGY
CCCCCCCCHHEEEEEEEEEECCCCEEECCCCCCCCCCCCEEEEECCEEEECCCEEEEEEC
GYAIAHDTGGDIKGNRIDLFMNSEAECNSWGRRSVKVYILG
CEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]