BacMap

Definition	Clostridium botulinum A2 str. Kyoto chromosome, complete genome.
Accession	NC_012563
Length	4,155,278

Click here to switch to the map view.

The map label for this gene is cshA [H]

Identifier: 226950212

GI number: 226950212

Start: 3178975

End: 3180549

Strand: Reverse

Name: cshA [H]

Synonym: CLM_3166

Alternate gene names: 226950212

Gene position: 3180549-3178975 (Counterclockwise)

Preceding gene: 226950213

Following gene: 226950211

Centisome position: 76.54

GC content: 29.27

Gene sequence:

>1575_bases
ATGGAAAATAAAAACTTTGAAAATTTGAACTTAAATGAAGATGTACTAAAAGCTATACAACATATGGGATTTGAAACTCC
ATCTGCAATACAAGAAAAATCAATTCCAGTAGTATTAGAAGGAGCAGATGTTATAGCTCAAGCTCAAACAGGAACAGGTA
AAACCTTAGCTTTTGGAGCTCCTGTAATAAGCGCTTTGTGTGACAAGGAAAAGAAAAAAGGCGTAAAAGCTTTAGTATTA
ACACCTACAAGAGAACTAGCCCTTCAAATAAAAGATGAGCTAAAGAGATTATCTAAATATAGTAAAACAAAAGTACTTCC
TGTTTATGGAGGAGAGTCTATAGAAAGACAAATAAAAGATATTAAAAGTGGAGTAGACATAGTGGTTGGAACTCCAGGAA
GAGTATTAGACCACATTAATAGAAGAACTTTAAAGCTTGGAGGTATTGATTTCCTAGTTTTAGACGAAGCAGATGAAATG
CTTAATATGGGATTTATAGAAGATATAGAAACTATAATGGAAAGTACTTCTGAAGAAAAACAAACTATGCTTTTTTCAGC
TACTATGCCAGAACCTATTAAGAAATTAGCTTTAAACTATATGAAAAAAGATGTAGAGCATATAGCTATTTTAAAAAAAT
CATTAACAGTAGATAAAATAGCACAAAATTATTTTGCAGTAAAAAATAAAGATAAACTAGAAGCTTTATGCAGAATAATA
GATTCAGAGGAGCCAGAAAGTGCTATAATATTTTGTAGAACTAAAAGAGGCGTTGATGAATTAGTTGAAGCTATGCAATC
AAAAGGATACAATGTAGAAGGTATGCATGGAGATATGAGCCAAAATCAAAGAATAAATACTTTGAAAAAATTTAAAAAAG
CTACTTTAAACTTTTTAGTTGCCACAGATGTAGCAGCAAGAGGGATAGATGTAGAGAACATATCTCACGTTATTAACTAT
GATATACCTCAAGATGCGGAATCCTATGTTCATAGAATAGGAAGAACAGGAAGAGCTGATAAAGAAGGAACAGCCTATTC
TTTAGTTACCCCTAGAGAAGTATCTTCTATTAGACAGATAGAAAGAATAACTAAGAGTAAAATCAAGAAAAAAGAATTAC
CTACTTTAGAGGATATATTAGAAAAGAAATATGATAATTTATTAAATGATATAACTTCTAAAATAGAAGAAAATAAATAT
GAAAAATTTATGCCAATGGTAAAAACTTTAGAACAAAATTTTGATTTATCTCAAGTTTCAGCAGCTTTGATGGAAATGTT
ATTTAGTAAAGAAATGAGCTTTGATTATACAAATAACAAACTAGAGGCAGAAGTTCCAGTAAGATTATTCTTAAGCGTGG
GAAGAAAAGATAGTATAAATGTAAAAAGTCTATTAACATTTATTCAAGATGCAGCCTCTGTAAAAAATCATGAAATTGGA
GATATAGATATATTAGATAAATTTACTTTTATGGATGTATCATCAGGCACTGCAGAAAAGATAATAAATAAATGTTCAGG
TAAAAAATTAAATAGAAGAAAAGTTAATATCGAAATAGCTAAAAGTAAAAAGTAA

Upstream 100 bases:

>100_bases
AACAACAACAGATCTTTTAGATAATTAGAAAAGATTTTTTATTGGCTGTTGATTATATGTCAACAGCCATTTTTAATTAA
CAACTAGAAAGGAACATTAT

Downstream 100 bases:

>100_bases
ATTATTTTAAATTTAGTTATTTAAAGGGGAATTACTAGAGAATTTAGAAGCTAAGAGGTAAATTTTATTTGTTTCTTAGC
TTTTGTTATTTTTTGATGTA

Product: DEAD/DEAH box family ATP-dependent RNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MENKNFENLNLNEDVLKAIQHMGFETPSAIQEKSIPVVLEGADVIAQAQTGTGKTLAFGAPVISALCDKEKKKGVKALVL
TPTRELALQIKDELKRLSKYSKTKVLPVYGGESIERQIKDIKSGVDIVVGTPGRVLDHINRRTLKLGGIDFLVLDEADEM
LNMGFIEDIETIMESTSEEKQTMLFSATMPEPIKKLALNYMKKDVEHIAILKKSLTVDKIAQNYFAVKNKDKLEALCRII
DSEEPESAIIFCRTKRGVDELVEAMQSKGYNVEGMHGDMSQNQRINTLKKFKKATLNFLVATDVAARGIDVENISHVINY
DIPQDAESYVHRIGRTGRADKEGTAYSLVTPREVSSIRQIERITKSKIKKKELPTLEDILEKKYDNLLNDITSKIEENKY
EKFMPMVKTLEQNFDLSQVSAALMEMLFSKEMSFDYTNNKLEAEVPVRLFLSVGRKDSINVKSLLTFIQDAASVKNHEIG
DIDILDKFTFMDVSSGTAEKIINKCSGKKLNRRKVNIEIAKSKK

Sequences:

>Translated_524_residues
MENKNFENLNLNEDVLKAIQHMGFETPSAIQEKSIPVVLEGADVIAQAQTGTGKTLAFGAPVISALCDKEKKKGVKALVL
TPTRELALQIKDELKRLSKYSKTKVLPVYGGESIERQIKDIKSGVDIVVGTPGRVLDHINRRTLKLGGIDFLVLDEADEM
LNMGFIEDIETIMESTSEEKQTMLFSATMPEPIKKLALNYMKKDVEHIAILKKSLTVDKIAQNYFAVKNKDKLEALCRII
DSEEPESAIIFCRTKRGVDELVEAMQSKGYNVEGMHGDMSQNQRINTLKKFKKATLNFLVATDVAARGIDVENISHVINY
DIPQDAESYVHRIGRTGRADKEGTAYSLVTPREVSSIRQIERITKSKIKKKELPTLEDILEKKYDNLLNDITSKIEENKY
EKFMPMVKTLEQNFDLSQVSAALMEMLFSKEMSFDYTNNKLEAEVPVRLFLSVGRKDSINVKSLLTFIQDAASVKNHEIG
DIDILDKFTFMDVSSGTAEKIINKCSGKKLNRRKVNIEIAKSKK
>Mature_524_residues
MENKNFENLNLNEDVLKAIQHMGFETPSAIQEKSIPVVLEGADVIAQAQTGTGKTLAFGAPVISALCDKEKKKGVKALVL
TPTRELALQIKDELKRLSKYSKTKVLPVYGGESIERQIKDIKSGVDIVVGTPGRVLDHINRRTLKLGGIDFLVLDEADEM
LNMGFIEDIETIMESTSEEKQTMLFSATMPEPIKKLALNYMKKDVEHIAILKKSLTVDKIAQNYFAVKNKDKLEALCRII
DSEEPESAIIFCRTKRGVDELVEAMQSKGYNVEGMHGDMSQNQRINTLKKFKKATLNFLVATDVAARGIDVENISHVINY
DIPQDAESYVHRIGRTGRADKEGTAYSLVTPREVSSIRQIERITKSKIKKKELPTLEDILEKKYDNLLNDITSKIEENKY
EKFMPMVKTLEQNFDLSQVSAALMEMLFSKEMSFDYTNNKLEAEVPVRLFLSVGRKDSINVKSLLTFIQDAASVKNHEIG
DIDILDKFTFMDVSSGTAEKIINKCSGKKLNRRKVNIEIAKSKK

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. In vitro, unwinds dsRNA in both 5'- and 3'- directions and shows RNA-dependent ATPase activity. Required for vegetative grow

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid. Note=Shows transcription-dependent localization at subcellular sites surrounding the nucleoid. Associated with free 50S ribosomal subunit, 70S ribosome and polysomes [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=371, Percent_Identity=40.4312668463612, Blast_Score=286, Evalue=3e-77,
Organism=Homo sapiens, GI4758138, Length=384, Percent_Identity=39.0625, Blast_Score=266, Evalue=4e-71,
Organism=Homo sapiens, GI13129006, Length=402, Percent_Identity=37.3134328358209, Blast_Score=261, Evalue=1e-69,
Organism=Homo sapiens, GI4503529, Length=372, Percent_Identity=39.5161290322581, Blast_Score=255, Evalue=9e-68,
Organism=Homo sapiens, GI83700235, Length=372, Percent_Identity=39.7849462365591, Blast_Score=252, Evalue=6e-67,
Organism=Homo sapiens, GI224593278, Length=404, Percent_Identity=35.6435643564356, Blast_Score=249, Evalue=4e-66,
Organism=Homo sapiens, GI20149629, Length=378, Percent_Identity=35.4497354497354, Blast_Score=249, Evalue=5e-66,
Organism=Homo sapiens, GI301171475, Length=399, Percent_Identity=35.5889724310777, Blast_Score=249, Evalue=6e-66,
Organism=Homo sapiens, GI301171467, Length=373, Percent_Identity=36.4611260053619, Blast_Score=249, Evalue=6e-66,
Organism=Homo sapiens, GI87196351, Length=373, Percent_Identity=36.4611260053619, Blast_Score=248, Evalue=7e-66,
Organism=Homo sapiens, GI169881239, Length=366, Percent_Identity=37.431693989071, Blast_Score=247, Evalue=2e-65,
Organism=Homo sapiens, GI13514809, Length=366, Percent_Identity=37.431693989071, Blast_Score=247, Evalue=2e-65,
Organism=Homo sapiens, GI148613856, Length=365, Percent_Identity=36.986301369863, Blast_Score=246, Evalue=3e-65,
Organism=Homo sapiens, GI38201710, Length=365, Percent_Identity=36.986301369863, Blast_Score=246, Evalue=3e-65,
Organism=Homo sapiens, GI45446747, Length=358, Percent_Identity=36.5921787709497, Blast_Score=242, Evalue=6e-64,
Organism=Homo sapiens, GI45446743, Length=358, Percent_Identity=36.5921787709497, Blast_Score=242, Evalue=6e-64,
Organism=Homo sapiens, GI50659095, Length=389, Percent_Identity=35.73264781491, Blast_Score=239, Evalue=6e-63,
Organism=Homo sapiens, GI222352149, Length=343, Percent_Identity=38.4839650145773, Blast_Score=238, Evalue=8e-63,
Organism=Homo sapiens, GI55749865, Length=346, Percent_Identity=36.4161849710983, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI41327773, Length=354, Percent_Identity=36.4406779661017, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI164664518, Length=365, Percent_Identity=35.0684931506849, Blast_Score=234, Evalue=2e-61,
Organism=Homo sapiens, GI41327771, Length=380, Percent_Identity=34.4736842105263, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI262118318, Length=355, Percent_Identity=35.2112676056338, Blast_Score=228, Evalue=8e-60,
Organism=Homo sapiens, GI262231852, Length=355, Percent_Identity=35.2112676056338, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI216548263, Length=355, Percent_Identity=35.2112676056338, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI13518015, Length=355, Percent_Identity=35.2112676056338, Blast_Score=226, Evalue=4e-59,
Organism=Homo sapiens, GI21071032, Length=358, Percent_Identity=35.4748603351955, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI51094101, Length=360, Percent_Identity=33.3333333333333, Blast_Score=222, Evalue=8e-58,
Organism=Homo sapiens, GI164419743, Length=360, Percent_Identity=33.3333333333333, Blast_Score=222, Evalue=9e-58,
Organism=Homo sapiens, GI31542656, Length=374, Percent_Identity=34.4919786096257, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI38327634, Length=401, Percent_Identity=33.6658354114713, Blast_Score=215, Evalue=1e-55,
Organism=Homo sapiens, GI21040371, Length=354, Percent_Identity=34.4632768361582, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI4758112, Length=354, Percent_Identity=34.180790960452, Blast_Score=209, Evalue=6e-54,
Organism=Homo sapiens, GI18375623, Length=354, Percent_Identity=34.180790960452, Blast_Score=209, Evalue=6e-54,
Organism=Homo sapiens, GI188035877, Length=350, Percent_Identity=36.2857142857143, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI41327776, Length=378, Percent_Identity=32.010582010582, Blast_Score=206, Evalue=5e-53,
Organism=Homo sapiens, GI13514831, Length=376, Percent_Identity=32.1808510638298, Blast_Score=202, Evalue=6e-52,
Organism=Homo sapiens, GI164419732, Length=379, Percent_Identity=35.0923482849604, Blast_Score=199, Evalue=6e-51,
Organism=Homo sapiens, GI41327779, Length=369, Percent_Identity=34.4173441734417, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI6005743, Length=389, Percent_Identity=34.7043701799486, Blast_Score=197, Evalue=3e-50,
Organism=Homo sapiens, GI8922886, Length=389, Percent_Identity=34.4473007712082, Blast_Score=196, Evalue=6e-50,
Organism=Homo sapiens, GI17505907, Length=439, Percent_Identity=30.751708428246, Blast_Score=187, Evalue=3e-47,
Organism=Homo sapiens, GI62241022, Length=371, Percent_Identity=34.7708894878706, Blast_Score=186, Evalue=6e-47,
Organism=Homo sapiens, GI256223453, Length=349, Percent_Identity=33.810888252149, Blast_Score=182, Evalue=8e-46,
Organism=Homo sapiens, GI38569503, Length=364, Percent_Identity=30.7692307692308, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI38569505, Length=366, Percent_Identity=30.6010928961749, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI256773275, Length=410, Percent_Identity=29.5121951219512, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI9506931, Length=412, Percent_Identity=27.9126213592233, Blast_Score=169, Evalue=4e-42,
Organism=Homo sapiens, GI62241024, Length=348, Percent_Identity=34.1954022988506, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI4826686, Length=333, Percent_Identity=33.9339339339339, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI9966805, Length=395, Percent_Identity=28.1012658227848, Blast_Score=152, Evalue=9e-37,
Organism=Homo sapiens, GI154759257, Length=463, Percent_Identity=25.2699784017279, Blast_Score=140, Evalue=4e-33,
Organism=Homo sapiens, GI20336298, Length=246, Percent_Identity=35.7723577235772, Blast_Score=134, Evalue=3e-31,
Organism=Escherichia coli, GI87082221, Length=559, Percent_Identity=36.3148479427549, Blast_Score=355, Evalue=4e-99,
Organism=Escherichia coli, GI1787016, Length=377, Percent_Identity=41.3793103448276, Blast_Score=307, Evalue=8e-85,
Organism=Escherichia coli, GI1790214, Length=369, Percent_Identity=37.6693766937669, Blast_Score=261, Evalue=7e-71,
Organism=Escherichia coli, GI1787605, Length=389, Percent_Identity=35.9897172236504, Blast_Score=252, Evalue=5e-68,
Organism=Escherichia coli, GI1788930, Length=358, Percent_Identity=37.9888268156425, Blast_Score=230, Evalue=2e-61,
Organism=Escherichia coli, GI48994977, Length=380, Percent_Identity=24.4736842105263, Blast_Score=91, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71987143, Length=372, Percent_Identity=40.3225806451613, Blast_Score=287, Evalue=7e-78,
Organism=Caenorhabditis elegans, GI71995724, Length=371, Percent_Identity=40.4312668463612, Blast_Score=283, Evalue=2e-76,
Organism=Caenorhabditis elegans, GI17507121, Length=371, Percent_Identity=40.1617250673854, Blast_Score=282, Evalue=2e-76,
Organism=Caenorhabditis elegans, GI17555296, Length=362, Percent_Identity=37.292817679558, Blast_Score=254, Evalue=1e-67,
Organism=Caenorhabditis elegans, GI115533224, Length=372, Percent_Identity=38.7096774193548, Blast_Score=251, Evalue=5e-67,
Organism=Caenorhabditis elegans, GI32565321, Length=381, Percent_Identity=36.745406824147, Blast_Score=246, Evalue=3e-65,
Organism=Caenorhabditis elegans, GI71995718, Length=375, Percent_Identity=36.8, Blast_Score=245, Evalue=3e-65,
Organism=Caenorhabditis elegans, GI86570094, Length=356, Percent_Identity=38.7640449438202, Blast_Score=242, Evalue=3e-64,
Organism=Caenorhabditis elegans, GI17537549, Length=352, Percent_Identity=38.6363636363636, Blast_Score=242, Evalue=4e-64,
Organism=Caenorhabditis elegans, GI17552114, Length=364, Percent_Identity=35.989010989011, Blast_Score=239, Evalue=2e-63,
Organism=Caenorhabditis elegans, GI17510559, Length=431, Percent_Identity=33.8747099767981, Blast_Score=239, Evalue=4e-63,
Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=36.6391184573003, Blast_Score=233, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI17510309, Length=391, Percent_Identity=35.8056265984655, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI71995514, Length=391, Percent_Identity=35.8056265984655, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI71999646, Length=359, Percent_Identity=33.983286908078, Blast_Score=228, Evalue=5e-60,
Organism=Caenorhabditis elegans, GI71999644, Length=359, Percent_Identity=33.983286908078, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI115532546, Length=378, Percent_Identity=34.3915343915344, Blast_Score=224, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI115532548, Length=378, Percent_Identity=34.3915343915344, Blast_Score=222, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI17507945, Length=366, Percent_Identity=35.792349726776, Blast_Score=221, Evalue=6e-58,
Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=35.8490566037736, Blast_Score=221, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI17552642, Length=362, Percent_Identity=35.0828729281768, Blast_Score=219, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI17507879, Length=371, Percent_Identity=34.7708894878706, Blast_Score=214, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17509811, Length=383, Percent_Identity=33.420365535248, Blast_Score=214, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI71982858, Length=354, Percent_Identity=33.8983050847458, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17507881, Length=399, Percent_Identity=32.3308270676692, Blast_Score=207, Evalue=7e-54,
Organism=Caenorhabditis elegans, GI17536099, Length=374, Percent_Identity=35.5614973262032, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17536101, Length=374, Percent_Identity=35.5614973262032, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17536103, Length=374, Percent_Identity=35.5614973262032, Blast_Score=193, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI17505370, Length=357, Percent_Identity=31.3725490196078, Blast_Score=188, Evalue=8e-48,
Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=30.945558739255, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17553716, Length=375, Percent_Identity=32.2666666666667, Blast_Score=179, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI193208216, Length=380, Percent_Identity=33.4210526315789, Blast_Score=175, Evalue=6e-44,
Organism=Caenorhabditis elegans, GI17507641, Length=385, Percent_Identity=29.8701298701299, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI71990816, Length=366, Percent_Identity=31.1475409836066, Blast_Score=161, Evalue=9e-40,
Organism=Caenorhabditis elegans, GI32564046, Length=372, Percent_Identity=29.0322580645161, Blast_Score=151, Evalue=6e-37,
Organism=Caenorhabditis elegans, GI17556951, Length=348, Percent_Identity=29.0229885057471, Blast_Score=150, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17508543, Length=382, Percent_Identity=27.4869109947644, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI25148203, Length=430, Percent_Identity=25.1162790697674, Blast_Score=141, Evalue=9e-34,
Organism=Caenorhabditis elegans, GI25148291, Length=436, Percent_Identity=27.0642201834862, Blast_Score=138, Evalue=9e-33,
Organism=Caenorhabditis elegans, GI71982862, Length=216, Percent_Identity=37.962962962963, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI71997889, Length=362, Percent_Identity=27.0718232044199, Blast_Score=116, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17557982, Length=386, Percent_Identity=26.1658031088083, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71987152, Length=110, Percent_Identity=39.0909090909091, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17565430, Length=376, Percent_Identity=23.6702127659574, Blast_Score=96, Evalue=6e-20,
Organism=Saccharomyces cerevisiae, GI6320224, Length=367, Percent_Identity=39.5095367847411, Blast_Score=266, Evalue=4e-72,
Organism=Saccharomyces cerevisiae, GI6324778, Length=388, Percent_Identity=36.340206185567, Blast_Score=254, Evalue=3e-68,
Organism=Saccharomyces cerevisiae, GI6325138, Length=396, Percent_Identity=36.3636363636364, Blast_Score=252, Evalue=9e-68,
Organism=Saccharomyces cerevisiae, GI6321360, Length=356, Percent_Identity=39.8876404494382, Blast_Score=251, Evalue=3e-67,
Organism=Saccharomyces cerevisiae, GI6322912, Length=372, Percent_Identity=40.0537634408602, Blast_Score=249, Evalue=8e-67,
Organism=Saccharomyces cerevisiae, GI6322323, Length=372, Percent_Identity=40.0537634408602, Blast_Score=249, Evalue=8e-67,
Organism=Saccharomyces cerevisiae, GI6321856, Length=386, Percent_Identity=36.5284974093264, Blast_Score=246, Evalue=7e-66,
Organism=Saccharomyces cerevisiae, GI6324217, Length=351, Percent_Identity=37.037037037037, Blast_Score=244, Evalue=4e-65,
Organism=Saccharomyces cerevisiae, GI6320041, Length=357, Percent_Identity=36.1344537815126, Blast_Score=236, Evalue=7e-63,
Organism=Saccharomyces cerevisiae, GI6323021, Length=366, Percent_Identity=37.9781420765027, Blast_Score=233, Evalue=5e-62,
Organism=Saccharomyces cerevisiae, GI6322427, Length=382, Percent_Identity=35.3403141361257, Blast_Score=222, Evalue=1e-58,
Organism=Saccharomyces cerevisiae, GI6320449, Length=425, Percent_Identity=34.8235294117647, Blast_Score=221, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6321963, Length=430, Percent_Identity=33.7209302325581, Blast_Score=221, Evalue=3e-58,
Organism=Saccharomyces cerevisiae, GI6323947, Length=402, Percent_Identity=32.3383084577114, Blast_Score=215, Evalue=1e-56,
Organism=Saccharomyces cerevisiae, GI6320119, Length=359, Percent_Identity=33.1476323119777, Blast_Score=204, Evalue=4e-53,
Organism=Saccharomyces cerevisiae, GI6324620, Length=362, Percent_Identity=34.5303867403315, Blast_Score=197, Evalue=4e-51,
Organism=Saccharomyces cerevisiae, GI6319618, Length=425, Percent_Identity=31.2941176470588, Blast_Score=194, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6320400, Length=395, Percent_Identity=32.9113924050633, Blast_Score=188, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6319714, Length=382, Percent_Identity=30.6282722513089, Blast_Score=179, Evalue=8e-46,
Organism=Saccharomyces cerevisiae, GI6321111, Length=374, Percent_Identity=30.4812834224599, Blast_Score=175, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6321267, Length=376, Percent_Identity=31.9148936170213, Blast_Score=159, Evalue=7e-40,
Organism=Saccharomyces cerevisiae, GI6323306, Length=421, Percent_Identity=29.4536817102138, Blast_Score=158, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6320173, Length=186, Percent_Identity=36.0215053763441, Blast_Score=143, Evalue=8e-35,
Organism=Saccharomyces cerevisiae, GI6322876, Length=413, Percent_Identity=28.3292978208232, Blast_Score=134, Evalue=3e-32,
Organism=Saccharomyces cerevisiae, GI6324366, Length=361, Percent_Identity=27.9778393351801, Blast_Score=133, Evalue=7e-32,
Organism=Saccharomyces cerevisiae, GI6321374, Length=400, Percent_Identity=25, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6323844, Length=368, Percent_Identity=22.2826086956522, Blast_Score=74, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24645031, Length=371, Percent_Identity=40.7008086253369, Blast_Score=280, Evalue=1e-75,
Organism=Drosophila melanogaster, GI24582080, Length=371, Percent_Identity=40.1617250673854, Blast_Score=264, Evalue=1e-70,
Organism=Drosophila melanogaster, GI24582078, Length=371, Percent_Identity=40.1617250673854, Blast_Score=264, Evalue=1e-70,
Organism=Drosophila melanogaster, GI17136248, Length=371, Percent_Identity=40.1617250673854, Blast_Score=264, Evalue=1e-70,
Organism=Drosophila melanogaster, GI24582075, Length=371, Percent_Identity=40.1617250673854, Blast_Score=264, Evalue=1e-70,
Organism=Drosophila melanogaster, GI24584399, Length=359, Percent_Identity=38.9972144846797, Blast_Score=259, Evalue=5e-69,
Organism=Drosophila melanogaster, GI24644487, Length=355, Percent_Identity=38.0281690140845, Blast_Score=254, Evalue=8e-68,
Organism=Drosophila melanogaster, GI45551833, Length=355, Percent_Identity=38.0281690140845, Blast_Score=254, Evalue=8e-68,
Organism=Drosophila melanogaster, GI24644485, Length=355, Percent_Identity=38.0281690140845, Blast_Score=254, Evalue=8e-68,
Organism=Drosophila melanogaster, GI28574962, Length=352, Percent_Identity=38.9204545454545, Blast_Score=254, Evalue=9e-68,
Organism=Drosophila melanogaster, GI24644483, Length=355, Percent_Identity=38.0281690140845, Blast_Score=254, Evalue=9e-68,
Organism=Drosophila melanogaster, GI24644479, Length=355, Percent_Identity=38.0281690140845, Blast_Score=254, Evalue=9e-68,
Organism=Drosophila melanogaster, GI281361218, Length=355, Percent_Identity=38.0281690140845, Blast_Score=254, Evalue=1e-67,
Organism=Drosophila melanogaster, GI24644481, Length=355, Percent_Identity=38.0281690140845, Blast_Score=254, Evalue=1e-67,
Organism=Drosophila melanogaster, GI18857967, Length=369, Percent_Identity=37.1273712737127, Blast_Score=252, Evalue=6e-67,
Organism=Drosophila melanogaster, GI24585582, Length=359, Percent_Identity=37.3259052924791, Blast_Score=248, Evalue=9e-66,
Organism=Drosophila melanogaster, GI21355075, Length=346, Percent_Identity=39.5953757225434, Blast_Score=247, Evalue=1e-65,
Organism=Drosophila melanogaster, GI24642151, Length=357, Percent_Identity=35.5742296918768, Blast_Score=243, Evalue=2e-64,
Organism=Drosophila melanogaster, GI17985987, Length=368, Percent_Identity=36.4130434782609, Blast_Score=241, Evalue=1e-63,
Organism=Drosophila melanogaster, GI24662330, Length=353, Percent_Identity=37.1104815864023, Blast_Score=236, Evalue=3e-62,
Organism=Drosophila melanogaster, GI21356161, Length=463, Percent_Identity=33.9092872570194, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI24584994, Length=379, Percent_Identity=34.8284960422164, Blast_Score=230, Evalue=2e-60,
Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=35.4748603351955, Blast_Score=225, Evalue=5e-59,
Organism=Drosophila melanogaster, GI24583281, Length=364, Percent_Identity=34.0659340659341, Blast_Score=225, Evalue=7e-59,
Organism=Drosophila melanogaster, GI24583279, Length=364, Percent_Identity=34.0659340659341, Blast_Score=224, Evalue=8e-59,
Organism=Drosophila melanogaster, GI28575014, Length=351, Percent_Identity=34.1880341880342, Blast_Score=220, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24581954, Length=353, Percent_Identity=34.5609065155807, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24581952, Length=353, Percent_Identity=34.5609065155807, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24581956, Length=353, Percent_Identity=34.5609065155807, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI17136814, Length=389, Percent_Identity=32.133676092545, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI281365720, Length=311, Percent_Identity=36.0128617363344, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI28571808, Length=369, Percent_Identity=31.7073170731707, Blast_Score=197, Evalue=2e-50,
Organism=Drosophila melanogaster, GI28571809, Length=369, Percent_Identity=31.7073170731707, Blast_Score=197, Evalue=2e-50,
Organism=Drosophila melanogaster, GI24666101, Length=350, Percent_Identity=34.5714285714286, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI20130173, Length=442, Percent_Identity=28.5067873303167, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI28571338, Length=421, Percent_Identity=31.5914489311164, Blast_Score=189, Evalue=5e-48,
Organism=Drosophila melanogaster, GI18859659, Length=421, Percent_Identity=31.5914489311164, Blast_Score=189, Evalue=5e-48,
Organism=Drosophila melanogaster, GI21355559, Length=378, Percent_Identity=33.8624338624339, Blast_Score=187, Evalue=2e-47,
Organism=Drosophila melanogaster, GI24642822, Length=375, Percent_Identity=32.2666666666667, Blast_Score=180, Evalue=2e-45,
Organism=Drosophila melanogaster, GI17647335, Length=381, Percent_Identity=28.8713910761155, Blast_Score=168, Evalue=7e-42,
Organism=Drosophila melanogaster, GI24668515, Length=362, Percent_Identity=30.3867403314917, Blast_Score=150, Evalue=3e-36,
Organism=Drosophila melanogaster, GI24643725, Length=390, Percent_Identity=28.2051282051282, Blast_Score=147, Evalue=3e-35,
Organism=Drosophila melanogaster, GI19920478, Length=364, Percent_Identity=25.8241758241758, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI17136666, Length=421, Percent_Identity=24.4655581947743, Blast_Score=126, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24640164, Length=351, Percent_Identity=24.5014245014245, Blast_Score=122, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 58965; Mature: 58965

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKNFENLNLNEDVLKAIQHMGFETPSAIQEKSIPVVLEGADVIAQAQTGTGKTLAFGA
CCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCEEEECCHHEEECCCCCCCEEEEHH
PVISALCDKEKKKGVKALVLTPTRELALQIKDELKRLSKYSKTKVLPVYGGESIERQIKD
HHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHH
IKSGVDIVVGTPGRVLDHINRRTLKLGGIDFLVLDEADEMLNMGFIEDIETIMESTSEEK
HHCCCEEEECCCHHHHHHHCHHEEEECCEEEEEECCHHHHHHCCHHHHHHHHHHCCCHHH
QTMLFSATMPEPIKKLALNYMKKDVEHIAILKKSLTVDKIAQNYFAVKNKDKLEALCRII
HHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHH
DSEEPESAIIFCRTKRGVDELVEAMQSKGYNVEGMHGDMSQNQRINTLKKFKKATLNFLV
CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ATDVAARGIDVENISHVINYDIPQDAESYVHRIGRTGRADKEGTAYSLVTPREVSSIRQI
HHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHH
ERITKSKIKKKELPTLEDILEKKYDNLLNDITSKIEENKYEKFMPMVKTLEQNFDLSQVS
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AALMEMLFSKEMSFDYTNNKLEAEVPVRLFLSVGRKDSINVKSLLTFIQDAASVKNHEIG
HHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCC
DIDILDKFTFMDVSSGTAEKIINKCSGKKLNRRKVNIEIAKSKK
CEEHHCCEEEEECCCCHHHHHHHHHCCCCCCCEEEEEEEECCCC
>Mature Secondary Structure
MENKNFENLNLNEDVLKAIQHMGFETPSAIQEKSIPVVLEGADVIAQAQTGTGKTLAFGA
CCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCEEEECCHHEEECCCCCCCEEEEHH
PVISALCDKEKKKGVKALVLTPTRELALQIKDELKRLSKYSKTKVLPVYGGESIERQIKD
HHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHH
IKSGVDIVVGTPGRVLDHINRRTLKLGGIDFLVLDEADEMLNMGFIEDIETIMESTSEEK
HHCCCEEEECCCHHHHHHHCHHEEEECCEEEEEECCHHHHHHCCHHHHHHHHHHCCCHHH
QTMLFSATMPEPIKKLALNYMKKDVEHIAILKKSLTVDKIAQNYFAVKNKDKLEALCRII
HHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHH
DSEEPESAIIFCRTKRGVDELVEAMQSKGYNVEGMHGDMSQNQRINTLKKFKKATLNFLV
CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ATDVAARGIDVENISHVINYDIPQDAESYVHRIGRTGRADKEGTAYSLVTPREVSSIRQI
HHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHH
ERITKSKIKKKELPTLEDILEKKYDNLLNDITSKIEENKYEKFMPMVKTLEQNFDLSQVS
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AALMEMLFSKEMSFDYTNNKLEAEVPVRLFLSVGRKDSINVKSLLTFIQDAASVKNHEIG
HHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCC
DIDILDKFTFMDVSSGTAEKIINKCSGKKLNRRKVNIEIAKSKK
CEEHHCCEEEEECCCCHHHHHHHHHCCCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]