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The map label for this gene is rpmB

Identifier: 226949851

GI number: 226949851

Start: 2809960

End: 2810151

Strand: Direct

Name: rpmB

Synonym: CLM_2798

Alternate gene names: 226949851

Gene position: 2809960-2810151 (Clockwise)

Preceding gene: 226949844

Following gene: 226949871

Centisome position: 67.62

GC content: 36.98

Gene sequence:

>192_bases
GTGTCAAGAAAATGCGAAATATGTGGTAAAGGCGTTGTTTACGGTGTTCAATACAGCCATTCACATCGTCAATCTAAAAG
ATCCTTTGCTCCTAACATAAAGAGAGTTAAAGCAATAGTTAATGGAACTCCAAAAAGAGTTCATGTTTGTACTAGATGCC
TACGTTCAGGAAAGGTACAACGTGCTATATAA

Upstream 100 bases:

>100_bases
TCCAAACTATTTACTTGCATATAGCATATATTCTATGGTAAAATTATTAATGTTTGAATTGAGAAGTATAAACTTCACAA
TTTTAGGGAGGTGTTTTTAA

Downstream 100 bases:

>100_bases
CACAAAAAATGCAGTTGTTTAAACAATTGCATTTTTTATTTTATGTTTTTATTTTTTAACTCTTTTTATTTTTCTTATTA
TATTTGATAAAAACCTTGGA

Product: 50S ribosomal protein L28

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MSRKCEICGKGVVYGVQYSHSHRQSKRSFAPNIKRVKAIVNGTPKRVHVCTRCLRSGKVQRAI

Sequences:

>Translated_63_residues
MSRKCEICGKGVVYGVQYSHSHRQSKRSFAPNIKRVKAIVNGTPKRVHVCTRCLRSGKVQRAI
>Mature_62_residues
SRKCEICGKGVVYGVQYSHSHRQSKRSFAPNIKRVKAIVNGTPKRVHVCTRCLRSGKVQRAI

Specific function: Unknown

COG id: COG0227

COG function: function code J; Ribosomal protein L28

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L28P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL28_CLOB1 (A7FW64)

Other databases:

- EMBL:   CP000726
- RefSeq:   YP_001384675.1
- ProteinModelPortal:   A7FW64
- SMR:   A7FW64
- STRING:   A7FW64
- GeneID:   5396465
- GenomeReviews:   CP000726_GR
- KEGG:   cba:CLB_2371
- eggNOG:   COG0227
- HOGENOM:   HBG597003
- OMA:   NACTSCI
- ProtClustDB:   PRK00359
- BioCyc:   CBOT441770:CLB_2371-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00373
- InterPro:   IPR001383
- TIGRFAMs:   TIGR00009

Pfam domain/function: PF00830 Ribosomal_L28

EC number: NA

Molecular weight: Translated: 7112; Mature: 6980

Theoretical pI: Translated: 11.63; Mature: 11.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKCEICGKGVVYGVQYSHSHRQSKRSFAPNIKRVKAIVNGTPKRVHVCTRCLRSGKVQ
CCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCC
RAI
CCC
>Mature Secondary Structure 
SRKCEICGKGVVYGVQYSHSHRQSKRSFAPNIKRVKAIVNGTPKRVHVCTRCLRSGKVQ
CCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCC
RAI
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA