Click here to switch to the map view.

The map label for this gene is 226949747

Identifier: 226949747

GI number: 226949747

Start: 2697461

End: 2698606

Strand: Direct

Name: 226949747

Synonym: CLM_2687

Alternate gene names: NA

Gene position: 2697461-2698606 (Clockwise)

Preceding gene: 226949746

Following gene: 226949749

Centisome position: 64.92

GC content: 33.42

Gene sequence:

>1146_bases
ATGAGAAACAACGGAAGATTCACCGCAGCAGAGGAACTTATAGCTTTAGGTGCTGGTGATTTAATAAATATAACAGATGA
AAACAGTAGACATAAAAACATAGATTTTCCTGGTCATAAACACGCATGGCTTTATGATGTAAATAAAATAGAACCTGCTG
TAAAAAATCATATGAAAAATATGGGCATAGATATTCATCTTATCTCTAGAATAGTAGATGTAAAAAAAGAAGGAGATAAA
ATAAAAGGCATATATATTTCAGACGGAACTTACGTAGATGGTGATGTATTTATAGAAACTACTGGTTCTACAGGACCTAT
GGGCAATTGTTTAAGATATGGTAATGGATGTTCTATGTGTGTTCTAAGATGTCCTGCCTTTGGCCCTAGGGTAAGCTTAA
CTTCAAGAGCTGGAGTAGATGATTTCCAAGGAGAAAGAGAAGATGATTTACTAGGAGCCTTTAGTGGTTCCTGTAAACTA
GCTAAAGAAACTATGTCTGATGAATTGGTAAAAGAACTTGATGAAACTGGAGTATTGGTTTTAAAGGTTCCAAAGGAAGA
TATAAACTTAGATAAATTAAAAATGAAGGTTTGTCAGCAATATGCTCTAAAAGAATTTGCAGAAAATATCGTAATACTAG
ATACTGGCCATGCAAAATTAATGACTTCCTATTATCCTTTAGAAAAACTAAGAAAACTAAAGGGATTGGAAAAGGTAAAA
TATATAGATCCTTATGCAGGTGGAAAAGGTAATTCTATAAGATATTTATCTGTAGCTCCAAGAACAGATGATATGAAAGT
AAAAGGCCTAGAAAATCTTTTTGTTGGTGGAGAAAAATCAGGGCTGTTTGTGGGTCACACTGAAGCCATGACCACAGGAA
GTTTAGCTGGGCACAACGCTGTAAGATATTGTTTAGGTATGCCAATGTTAATTCTCCCAAGAAGTATAGCTTTAGGGGAT
TTAATAGCCTACGCAAATCATAAGCTTTATTCAAAGGAAGGTAGAAAAAATAGATATACCTTTGCCGGTGCAGAATATTT
TAAGAGAATGGTTGAAGAAAACTTGTATACTACAGATAAAGAAGAGATAAATAGAAGAATTTCAAAATTAAACTTGGAAA
ATGCTTTAGCTCAAAGATTAGTATAA

Upstream 100 bases:

>100_bases
CGCATGTGCAGCAGCTATAAGCGCTAAAAAAGCTGGTGCTGATGTTAGTATATTTGAAAAGACCGATTTGCTTTTAGGAC
TAGGTAATGTTGGTGGAATA

Downstream 100 bases:

>100_bases
AAATTTAGGAGCCAAGATTATGGCTCCTTTTAAAATTTTTATACTAAATATTATACATTTATTTCTGCTTTTTCTCCTAG
CATTGCTTTGTTCTGTTCTA

Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA

Products: NA

Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; tRNA Uridine 5-Carboxymethylaminomethyl GidA; Glucose Inhibited Division Protein A; 4-Cys Ferredoxin; FAD Dependent Oxidoreductase; Fragment Flavodoxin Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MRNNGRFTAAEELIALGAGDLINITDENSRHKNIDFPGHKHAWLYDVNKIEPAVKNHMKNMGIDIHLISRIVDVKKEGDK
IKGIYISDGTYVDGDVFIETTGSTGPMGNCLRYGNGCSMCVLRCPAFGPRVSLTSRAGVDDFQGEREDDLLGAFSGSCKL
AKETMSDELVKELDETGVLVLKVPKEDINLDKLKMKVCQQYALKEFAENIVILDTGHAKLMTSYYPLEKLRKLKGLEKVK
YIDPYAGGKGNSIRYLSVAPRTDDMKVKGLENLFVGGEKSGLFVGHTEAMTTGSLAGHNAVRYCLGMPMLILPRSIALGD
LIAYANHKLYSKEGRKNRYTFAGAEYFKRMVEENLYTTDKEEINRRISKLNLENALAQRLV

Sequences:

>Translated_381_residues
MRNNGRFTAAEELIALGAGDLINITDENSRHKNIDFPGHKHAWLYDVNKIEPAVKNHMKNMGIDIHLISRIVDVKKEGDK
IKGIYISDGTYVDGDVFIETTGSTGPMGNCLRYGNGCSMCVLRCPAFGPRVSLTSRAGVDDFQGEREDDLLGAFSGSCKL
AKETMSDELVKELDETGVLVLKVPKEDINLDKLKMKVCQQYALKEFAENIVILDTGHAKLMTSYYPLEKLRKLKGLEKVK
YIDPYAGGKGNSIRYLSVAPRTDDMKVKGLENLFVGGEKSGLFVGHTEAMTTGSLAGHNAVRYCLGMPMLILPRSIALGD
LIAYANHKLYSKEGRKNRYTFAGAEYFKRMVEENLYTTDKEEINRRISKLNLENALAQRLV
>Mature_381_residues
MRNNGRFTAAEELIALGAGDLINITDENSRHKNIDFPGHKHAWLYDVNKIEPAVKNHMKNMGIDIHLISRIVDVKKEGDK
IKGIYISDGTYVDGDVFIETTGSTGPMGNCLRYGNGCSMCVLRCPAFGPRVSLTSRAGVDDFQGEREDDLLGAFSGSCKL
AKETMSDELVKELDETGVLVLKVPKEDINLDKLKMKVCQQYALKEFAENIVILDTGHAKLMTSYYPLEKLRKLKGLEKVK
YIDPYAGGKGNSIRYLSVAPRTDDMKVKGLENLFVGGEKSGLFVGHTEAMTTGSLAGHNAVRYCLGMPMLILPRSIALGD
LIAYANHKLYSKEGRKNRYTFAGAEYFKRMVEENLYTTDKEEINRRISKLNLENALAQRLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42430; Mature: 42430

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNNGRFTAAEELIALGAGDLINITDENSRHKNIDFPGHKHAWLYDVNKIEPAVKNHMKN
CCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEEECHHCCHHHHHHHHH
MGIDIHLISRIVDVKKEGDKIKGIYISDGTYVDGDVFIETTGSTGPMGNCLRYGNGCSMC
CCCHHHHHHHHHHHHCCCCEEEEEEEECCEEECCEEEEEECCCCCCCCCHHHCCCCCCEE
VLRCPAFGPRVSLTSRAGVDDFQGEREDDLLGAFSGSCKLAKETMSDELVKELDETGVLV
EEECCCCCCCEEECCCCCCCHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEE
LKVPKEDINLDKLKMKVCQQYALKEFAENIVILDTGHAKLMTSYYPLEKLRKLKGLEKVK
EEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCHHHHHHHHCHHHEE
YIDPYAGGKGNSIRYLSVAPRTDDMKVKGLENLFVGGEKSGLFVGHTEAMTTGSLAGHNA
EECCCCCCCCCEEEEEEECCCCCCCEECCCHHHEECCCCCCEEEECHHHHCCCCCCCHHH
VRYCLGMPMLILPRSIALGDLIAYANHKLYSKEGRKNRYTFAGAEYFKRMVEENLYTTDK
HHHHHCCCHHHHCCHHHHHHHHHHHCCHHCCCCCCCCCEEECHHHHHHHHHHHHCCCCCH
EEINRRISKLNLENALAQRLV
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRNNGRFTAAEELIALGAGDLINITDENSRHKNIDFPGHKHAWLYDVNKIEPAVKNHMKN
CCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEEECHHCCHHHHHHHHH
MGIDIHLISRIVDVKKEGDKIKGIYISDGTYVDGDVFIETTGSTGPMGNCLRYGNGCSMC
CCCHHHHHHHHHHHHCCCCEEEEEEEECCEEECCEEEEEECCCCCCCCCHHHCCCCCCEE
VLRCPAFGPRVSLTSRAGVDDFQGEREDDLLGAFSGSCKLAKETMSDELVKELDETGVLV
EEECCCCCCCEEECCCCCCCHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEE
LKVPKEDINLDKLKMKVCQQYALKEFAENIVILDTGHAKLMTSYYPLEKLRKLKGLEKVK
EEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCHHHHHHHHCHHHEE
YIDPYAGGKGNSIRYLSVAPRTDDMKVKGLENLFVGGEKSGLFVGHTEAMTTGSLAGHNA
EECCCCCCCCCEEEEEEECCCCCCCEECCCHHHEECCCCCCEEEECHHHHCCCCCCCHHH
VRYCLGMPMLILPRSIALGDLIAYANHKLYSKEGRKNRYTFAGAEYFKRMVEENLYTTDK
HHHHHCCCHHHHCCHHHHHHHHHHHCCHHCCCCCCCCCEEECHHHHHHHHHHHHCCCCCH
EEINRRISKLNLENALAQRLV
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA