Click here to switch to the map view.

The map label for this gene is 226949406

Identifier: 226949406

GI number: 226949406

Start: 2404193

End: 2405305

Strand: Reverse

Name: 226949406

Synonym: CLM_2331

Alternate gene names: NA

Gene position: 2405305-2404193 (Counterclockwise)

Preceding gene: 226949407

Following gene: 226949405

Centisome position: 57.89

GC content: 38.19

Gene sequence:

>1113_bases
ATGAATGGAGATTCAAAAGCAGTAAGCTTAGAAGCGGTTACTGCGAAGAAGAAATTATCAAGTGATTTCTTCAAAAAGGG
TATATCCCTGGCTTTATTTTCAGGACTTGCATATGGATTATATACCGCGTTTTTAACTATGGGTATGACTAAAGGAGTTT
GGGGGGACTGGTATGGTCCTAATACAGCAGGTTTATCAGCATTTGCTATAGCATATTTGCTTGCAGCCCTTGGCAACGCA
ATAAACGACACATGTAGTGCTGTTTGGGCACTTTTGTATGCAGGAGCTAAAGGTAAATTTGGAGACTTTTTAAGATGCGT
TAACACAAAGCCGGGACGTATCATGATATTAGCAGCTCTTATCGGAGGACCTATAGCTGGTACTGCTTATGTTATAGCAC
TTCAAATGGCTGGTTCAATAGTTGTTCCAATATCAGCTCTTTGCCCTGCAATTGCAGCTATACTAGGTAAAATTTTGTAC
AAGCAAGAATTAAATAAGCGTATGGCTTTTGGTATTTTAATATGCGTATGTGCAAGTTTTCTAATTGGTAGTACAGGCCT
TAGTGGCGGTGCTTCAGCAAATACATTAATTGGTATTGCAATAGCTATTATTGCAGCTTTAGGTTGGGGATTTGAAGGTT
GTGTAGCTGGATATGGTACAGCAATGATTGACCCTGAAATTGGTATTTGTATTCGTCAAGTAACATCAGGTATAGCAAAC
TTATTCATATTAGTTCCAATTTTCGGAATGATGGCTGGTGGAATTGGAATCTCTACTGATCTTGCTGTAAAAGCATTTAC
AAGTTCTCCTGCAATGGTTTGGTTTGCTTTAAGTGGACTTTTATCATTTGTAACATTCATGACATGGTATGCTGGAAACA
GTATGTGTGGAGCAGGACTTGGTACTGCATGCAATGGTACATATTCTTTCTTTGGACCATTATTCTGCTTATTAGTATTA
GGAGTATATGGTGGAATGGACGGATGGTCATTACCTCCTGTAGCTTGGATCGGAGCTGTAATAATGATGTTTGGTATTCT
TACAATATCTATGAATCCACTTGATTTATTCAAAGGAAAGAAAATGGAGGTAGATATAGATGAAACCGCTTAA

Upstream 100 bases:

>100_bases
AAATTATAACAATCTTAATGTATATTTATTATAAATTTTTATTTAACAATATGAATTTATAATATTATTAATTTTTTATA
AGCGAAAGGAGAATTATTTT

Downstream 100 bases:

>100_bases
TTATGCAATTTTAAAATATTTTACTAAAGTTTCAGAAGCTTGTGCTGATGATGTTATAAAGGCGTTAAAAGGACAATATG
GAAATTTTAAGGCTCTAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein MttP; Integral Membrane; Integral Membrane Protein Domain Protein; Choline Transport Or Trimethylamine Permease; Transporter Drug/Metabolite Exporter Family; Integral Membrane Protein

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MNGDSKAVSLEAVTAKKKLSSDFFKKGISLALFSGLAYGLYTAFLTMGMTKGVWGDWYGPNTAGLSAFAIAYLLAALGNA
INDTCSAVWALLYAGAKGKFGDFLRCVNTKPGRIMILAALIGGPIAGTAYVIALQMAGSIVVPISALCPAIAAILGKILY
KQELNKRMAFGILICVCASFLIGSTGLSGGASANTLIGIAIAIIAALGWGFEGCVAGYGTAMIDPEIGICIRQVTSGIAN
LFILVPIFGMMAGGIGISTDLAVKAFTSSPAMVWFALSGLLSFVTFMTWYAGNSMCGAGLGTACNGTYSFFGPLFCLLVL
GVYGGMDGWSLPPVAWIGAVIMMFGILTISMNPLDLFKGKKMEVDIDETA

Sequences:

>Translated_370_residues
MNGDSKAVSLEAVTAKKKLSSDFFKKGISLALFSGLAYGLYTAFLTMGMTKGVWGDWYGPNTAGLSAFAIAYLLAALGNA
INDTCSAVWALLYAGAKGKFGDFLRCVNTKPGRIMILAALIGGPIAGTAYVIALQMAGSIVVPISALCPAIAAILGKILY
KQELNKRMAFGILICVCASFLIGSTGLSGGASANTLIGIAIAIIAALGWGFEGCVAGYGTAMIDPEIGICIRQVTSGIAN
LFILVPIFGMMAGGIGISTDLAVKAFTSSPAMVWFALSGLLSFVTFMTWYAGNSMCGAGLGTACNGTYSFFGPLFCLLVL
GVYGGMDGWSLPPVAWIGAVIMMFGILTISMNPLDLFKGKKMEVDIDETA
>Mature_370_residues
MNGDSKAVSLEAVTAKKKLSSDFFKKGISLALFSGLAYGLYTAFLTMGMTKGVWGDWYGPNTAGLSAFAIAYLLAALGNA
INDTCSAVWALLYAGAKGKFGDFLRCVNTKPGRIMILAALIGGPIAGTAYVIALQMAGSIVVPISALCPAIAAILGKILY
KQELNKRMAFGILICVCASFLIGSTGLSGGASANTLIGIAIAIIAALGWGFEGCVAGYGTAMIDPEIGICIRQVTSGIAN
LFILVPIFGMMAGGIGISTDLAVKAFTSSPAMVWFALSGLLSFVTFMTWYAGNSMCGAGLGTACNGTYSFFGPLFCLLVL
GVYGGMDGWSLPPVAWIGAVIMMFGILTISMNPLDLFKGKKMEVDIDETA

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38335; Mature: 38335

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGDSKAVSLEAVTAKKKLSSDFFKKGISLALFSGLAYGLYTAFLTMGMTKGVWGDWYGP
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NTAGLSAFAIAYLLAALGNAINDTCSAVWALLYAGAKGKFGDFLRCVNTKPGRIMILAAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEHHH
IGGPIAGTAYVIALQMAGSIVVPISALCPAIAAILGKILYKQELNKRMAFGILICVCASF
HCCCCHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGSTGLSGGASANTLIGIAIAIIAALGWGFEGCVAGYGTAMIDPEIGICIRQVTSGIAN
HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCHHHHHHHHHHHHHHH
LFILVPIFGMMAGGIGISTDLAVKAFTSSPAMVWFALSGLLSFVTFMTWYAGNSMCGAGL
HHHHHHHHHHHHCCCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GTACNGTYSFFGPLFCLLVLGVYGGMDGWSLPPVAWIGAVIMMFGILTISMNPLDLFKGK
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCC
KMEVDIDETA
CEEEECCCCC
>Mature Secondary Structure
MNGDSKAVSLEAVTAKKKLSSDFFKKGISLALFSGLAYGLYTAFLTMGMTKGVWGDWYGP
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NTAGLSAFAIAYLLAALGNAINDTCSAVWALLYAGAKGKFGDFLRCVNTKPGRIMILAAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEHHH
IGGPIAGTAYVIALQMAGSIVVPISALCPAIAAILGKILYKQELNKRMAFGILICVCASF
HCCCCHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGSTGLSGGASANTLIGIAIAIIAALGWGFEGCVAGYGTAMIDPEIGICIRQVTSGIAN
HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCHHHHHHHHHHHHHHH
LFILVPIFGMMAGGIGISTDLAVKAFTSSPAMVWFALSGLLSFVTFMTWYAGNSMCGAGL
HHHHHHHHHHHHCCCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GTACNGTYSFFGPLFCLLVLGVYGGMDGWSLPPVAWIGAVIMMFGILTISMNPLDLFKGK
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCC
KMEVDIDETA
CEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA