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The map label for this gene is 226949384

Identifier: 226949384

GI number: 226949384

Start: 2381196

End: 2382101

Strand: Reverse

Name: 226949384

Synonym: CLM_2309

Alternate gene names: NA

Gene position: 2382101-2381196 (Counterclockwise)

Preceding gene: 226949385

Following gene: 226949379

Centisome position: 57.33

GC content: 32.45

Gene sequence:

>906_bases
ATGAGTTTATTATTAATGAAACAGATTGCCAAACTTTTTTTAATTATGGCTATGGGATTCATATTGGTTAAAACTCGTTT
AATGAAAGCAGAAGAGAGCAAGAGCCTTTCAATGGTTGTTATTTATCTAATAATGCCCTGTGTAATTATCAATGCTTTTC
AAGTGGAATATACAGAAAGTATTCGAAATGGTTTGATTCTTGCTTTTGTAGCAGCAGTATTGATTCATGTTGTACTGATA
ATTTTAACAAAAATACTTGAAAGGATATTCCACTTAGATGCAGTTGAAAAAGCATCCATTATGTATTCAAATGCTGGGAA
TTTGATTATACCCATTGTAACCTCTGTGTTAGGAAAAGAATGGGTTATCTATTCCAGTGCTTTCTTATCTGTACAGATAA
TTCTTCTCTGGACTCATGGCAGGATGGTACTCTGTGAAGAAGGAAAAATAGATTTGAAAAAAATTCTTTTAAATATAAAT
ATGATTACTATTTTCTTTGGAATTTTATTATTTATTACAAGAATTCAATTGCCAGATATCATCACGGAAACCATGGAATC
AGTAAGTGTTATGATTGGTCCTACTAGCATGGTTGTGACTGGAATGCTCATCGGAAATATAGGCTTGAAACAGGGATTTG
CACATAAGAAAATTTACCTAATTACTTTCCTAAAGATGATAGTATGTCCGATTATAATCTTAGTACTACTTAAATATGGC
GGAATGGCAAATATATTACCCAATGGGAGGATGATTCTGCTTATTAGTCTTCTTGCCACAATCACACCTTCTGCATCAAC
GGTTACGCAAATGGCTCAAATCTATGGAAAAAATGCAGAGTATGCAAGTATAATAAATGTAGGTACAACTATTGTTTGTA
TTGTAACGATGCCAATTATGGTTTGA

Upstream 100 bases:

>100_bases
GAAAATATTAAATAGAACCTTTAAAATAGTAAGTCCTTTTCGCTGAGTAAAAAAGAATTGAAATATAAAAGCAACAGATA
TAGATGGAGATGAAATTAAG

Downstream 100 bases:

>100_bases
TTGTATCAGATATAATTAAGATATATATGAAAAGGTTAAAGAGGATGTGACAGAAGAGGAAATAAAAAATTGTAAATACA
ATTTGTTTTGCTATAAATAT

Product: transporter, AEC family

Products: NA

Alternate protein names: Permease; Transporter Auxin Efflux Carrier Family Protein; Transporter Auxin Efflux Carrier Family; AEC Family Permease; Malate Permease; Transporter Protein; AEC Family Malonate Efflux Carrier; Malate Permease Related Permease; Auxin Efflux Carrier Family Protein; Transporter AEC Family

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MSLLLMKQIAKLFLIMAMGFILVKTRLMKAEESKSLSMVVIYLIMPCVIINAFQVEYTESIRNGLILAFVAAVLIHVVLI
ILTKILERIFHLDAVEKASIMYSNAGNLIIPIVTSVLGKEWVIYSSAFLSVQIILLWTHGRMVLCEEGKIDLKKILLNIN
MITIFFGILLFITRIQLPDIITETMESVSVMIGPTSMVVTGMLIGNIGLKQGFAHKKIYLITFLKMIVCPIIILVLLKYG
GMANILPNGRMILLISLLATITPSASTVTQMAQIYGKNAEYASIINVGTTIVCIVTMPIMV

Sequences:

>Translated_301_residues
MSLLLMKQIAKLFLIMAMGFILVKTRLMKAEESKSLSMVVIYLIMPCVIINAFQVEYTESIRNGLILAFVAAVLIHVVLI
ILTKILERIFHLDAVEKASIMYSNAGNLIIPIVTSVLGKEWVIYSSAFLSVQIILLWTHGRMVLCEEGKIDLKKILLNIN
MITIFFGILLFITRIQLPDIITETMESVSVMIGPTSMVVTGMLIGNIGLKQGFAHKKIYLITFLKMIVCPIIILVLLKYG
GMANILPNGRMILLISLLATITPSASTVTQMAQIYGKNAEYASIINVGTTIVCIVTMPIMV
>Mature_300_residues
SLLLMKQIAKLFLIMAMGFILVKTRLMKAEESKSLSMVVIYLIMPCVIINAFQVEYTESIRNGLILAFVAAVLIHVVLII
LTKILERIFHLDAVEKASIMYSNAGNLIIPIVTSVLGKEWVIYSSAFLSVQIILLWTHGRMVLCEEGKIDLKKILLNINM
ITIFFGILLFITRIQLPDIITETMESVSVMIGPTSMVVTGMLIGNIGLKQGFAHKKIYLITFLKMIVCPIIILVLLKYGG
MANILPNGRMILLISLLATITPSASTVTQMAQIYGKNAEYASIINVGTTIVCIVTMPIMV

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33340; Mature: 33209

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLLMKQIAKLFLIMAMGFILVKTRLMKAEESKSLSMVVIYLIMPCVIINAFQVEYTES
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IRNGLILAFVAAVLIHVVLIILTKILERIFHLDAVEKASIMYSNAGNLIIPIVTSVLGKE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCH
WVIYSSAFLSVQIILLWTHGRMVLCEEGKIDLKKILLNINMITIFFGILLFITRIQLPDI
HHEEHHHHHHEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ITETMESVSVMIGPTSMVVTGMLIGNIGLKQGFAHKKIYLITFLKMIVCPIIILVLLKYG
HHHHHHHHEEEECCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
GMANILPNGRMILLISLLATITPSASTVTQMAQIYGKNAEYASIINVGTTIVCIVTMPIM
CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
V
C
>Mature Secondary Structure 
SLLLMKQIAKLFLIMAMGFILVKTRLMKAEESKSLSMVVIYLIMPCVIINAFQVEYTES
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IRNGLILAFVAAVLIHVVLIILTKILERIFHLDAVEKASIMYSNAGNLIIPIVTSVLGKE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCH
WVIYSSAFLSVQIILLWTHGRMVLCEEGKIDLKKILLNINMITIFFGILLFITRIQLPDI
HHEEHHHHHHEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ITETMESVSVMIGPTSMVVTGMLIGNIGLKQGFAHKKIYLITFLKMIVCPIIILVLLKYG
HHHHHHHHEEEECCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
GMANILPNGRMILLISLLATITPSASTVTQMAQIYGKNAEYASIINVGTTIVCIVTMPIM
CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
V
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA