Click here to switch to the map view.

The map label for this gene is 226949355

Identifier: 226949355

GI number: 226949355

Start: 2348044

End: 2348718

Strand: Reverse

Name: 226949355

Synonym: CLM_2278

Alternate gene names: NA

Gene position: 2348718-2348044 (Counterclockwise)

Preceding gene: 226949356

Following gene: 226949354

Centisome position: 56.52

GC content: 31.26

Gene sequence:

>675_bases
GTGTTAATAATTAGATATTTAATTGCCTATATTCGTACATGTATTATGTATGTTGCTCATACTGATTATTTAATTAATAT
TATTCGCATATGTATTTTATGTATTGTATTTCAAAAAGGATTTTATCTAAGGGCTAAGAAGAGGGAAGGAGGAGTTTCCC
GCAAGCATCTTCTATGGGTATTTATTTTTTTATTGTATCTGGGAGCTGTTTATGGCGTAACAGGTATAGGAACAATTTGG
GATGTGCAAAGGTTTGTTACCGCATCTACATCTAAATTTGATCGAATTTATTTAGTTCCATTCTCTAGTTCTGAGGTAAT
CATGCCGTACGTTTTGAATATTATAATGACGATACCATTAGGATTCTTGTTACCATTGATTTGGAAACAATTTCGAACAA
TTAAAAAGGTTGCCTTGTCGGGATTTCTGTTATCCTTATGTATTGAGTTAAGTCAATTGTTCACTCAAAGTCGAACCACA
ACGACAGATGATTTAATTATGAACACCCTAGGAGCTATTATCGGATATTTCATCTTTAAAGCATTCTTTCACATCATCTT
GAAAAAAAATAGCAACGAAAAAGATGAAATAACATCATCTTCAGTTGTCATCAAACACGAAGCAATCTTTTATTTAGTAT
TATCATTTTTGGGAATGTTTTTATTTGCTATTTAG

Upstream 100 bases:

>100_bases
TCAGAAAGTCTTAAGATTGTATTCACTTATTATTAAATTTTTGTTGATATTATAATCATGCTAATAATTAAATTTTGATT
CAACAACAAGGAGGACTATT

Downstream 100 bases:

>100_bases
GGTTTTTAGCCATTAATGATACTTGATAAAAAATAAAGTCAATATATTATAAATATAATCATTAACAATTGTAATTTAAG
CTGATATCTACAAGAAGAAA

Product: vanZF protein

Products: NA

Alternate protein names: VanZF Protein; VanZ Protein; Teicoplanin Resistance Protein; VanZ Like Protein

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MLIIRYLIAYIRTCIMYVAHTDYLINIIRICILCIVFQKGFYLRAKKREGGVSRKHLLWVFIFLLYLGAVYGVTGIGTIW
DVQRFVTASTSKFDRIYLVPFSSSEVIMPYVLNIIMTIPLGFLLPLIWKQFRTIKKVALSGFLLSLCIELSQLFTQSRTT
TTDDLIMNTLGAIIGYFIFKAFFHIILKKNSNEKDEITSSSVVIKHEAIFYLVLSFLGMFLFAI

Sequences:

>Translated_224_residues
MLIIRYLIAYIRTCIMYVAHTDYLINIIRICILCIVFQKGFYLRAKKREGGVSRKHLLWVFIFLLYLGAVYGVTGIGTIW
DVQRFVTASTSKFDRIYLVPFSSSEVIMPYVLNIIMTIPLGFLLPLIWKQFRTIKKVALSGFLLSLCIELSQLFTQSRTT
TTDDLIMNTLGAIIGYFIFKAFFHIILKKNSNEKDEITSSSVVIKHEAIFYLVLSFLGMFLFAI
>Mature_224_residues
MLIIRYLIAYIRTCIMYVAHTDYLINIIRICILCIVFQKGFYLRAKKREGGVSRKHLLWVFIFLLYLGAVYGVTGIGTIW
DVQRFVTASTSKFDRIYLVPFSSSEVIMPYVLNIIMTIPLGFLLPLIWKQFRTIKKVALSGFLLSLCIELSQLFTQSRTT
TTDDLIMNTLGAIIGYFIFKAFFHIILKKNSNEKDEITSSSVVIKHEAIFYLVLSFLGMFLFAI

Specific function: Unknown

COG id: COG4767

COG function: function code V; Glycopeptide antibiotics resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25818; Mature: 25818

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIIRYLIAYIRTCIMYVAHTDYLINIIRICILCIVFQKGFYLRAKKREGGVSRKHLLWV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH
FIFLLYLGAVYGVTGIGTIWDVQRFVTASTSKFDRIYLVPFSSSEVIMPYVLNIIMTIPL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
GFLLPLIWKQFRTIKKVALSGFLLSLCIELSQLFTQSRTTTTDDLIMNTLGAIIGYFIFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AFFHIILKKNSNEKDEITSSSVVIKHEAIFYLVLSFLGMFLFAI
HHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLIIRYLIAYIRTCIMYVAHTDYLINIIRICILCIVFQKGFYLRAKKREGGVSRKHLLWV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH
FIFLLYLGAVYGVTGIGTIWDVQRFVTASTSKFDRIYLVPFSSSEVIMPYVLNIIMTIPL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
GFLLPLIWKQFRTIKKVALSGFLLSLCIELSQLFTQSRTTTTDDLIMNTLGAIIGYFIFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AFFHIILKKNSNEKDEITSSSVVIKHEAIFYLVLSFLGMFLFAI
HHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA