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The map label for this gene is yhaM [C]

Identifier: 226949306

GI number: 226949306

Start: 2291884

End: 2293188

Strand: Reverse

Name: yhaM [C]

Synonym: CLM_2226

Alternate gene names: 226949306

Gene position: 2293188-2291884 (Counterclockwise)

Preceding gene: 226949307

Following gene: 226949305

Centisome position: 55.19

GC content: 33.03

Gene sequence:

>1305_bases
ATGTCAAGATTATCAAAAGAGGAAATAAGTAAAAGATTATTAGAGTTAATAAAAGATGAAACTAAGCCAGCTATAGGATG
TACTGAACCTGTGGCAGTAGCTTTTACTGTAGCAACAGGTAAAAAGTATATGGCAGGTGAAGTCTTAAAAATAGACTTAA
AGGTAAGTAAAAACATATTAAAAAATGGTAAATCAGTTACTATACCAAATACAGAAGTTTGTGGTTTAGATATTGCAGGA
GCTCTTGGAGAAATATGTGGAGATCCAGAGGAAGGACTATTTGTTTTCAAAAATGTAAACAAGGATTATTTAGATAAAGC
AAGAGAAATGATAAAAAATAAAGTTGTGACTCTTAATACTATTGAAAATACAGATCCTGTTTTTGTAGAGGCTACTTTAA
AGGGAGAAAAGGATGAAGTTATAGCTATTTTAAAGGGAGGACATACTAATATAGAGAAGGTTATTGTAAATGGTGAAATA
GCCTTTGAAAAGGATAATAAAAATGAAAAAGATAATAAAGATTGTGATTTTATGAAGGAGCTTTCTTTAAAGGATATAAG
AAAAATTACAGAGGACATTAGTATAGAAAAATTAGACTTTATAATGGATGGAATAGAGATGAATAAGGAGGCTGCAAAGG
AAGGTTTAAAACGACAAAAGGGTTTAACATTAGGATCTTCTCTTTTAAAATTGCAACAGGAAGGGAAATTAGGCAAGGAT
TCAGCAACTATAGCAAGGATTTTAACTGCCGCAGGTTCCGATCTTAGAATGGGCGGAGGAATGTGTCCCATAATGACCAG
TGGAGGAAGCGGAAATCAAGGTTTATGTGTAATTCTACCTATTACTGTAGTAGCGGAGGATATAAAAGCTCCTAAAGAAA
AACTTCAAAGAGCAGTATTTTTTGGTCATGCCGTTAATAATTTTGTAAAGAAATATACAGGAAAATTATCTGCAATCTGT
GGTTGTGCCATAGCAGCAGGTATAGGGGCAACAGCAGGAATTACTTGGCTTTTAGGTGGAAAAGACAAGGAAATAAATGG
AGCCATATTAAATATGTTAGCAAATCTTACAGGAATGGTATGTGATGGAGCTAAGGGAAGCTGTGCCATTAAACTTTCAA
CTTCAGCTTCTGAAGCGGTTATATCAGCTTATTTAGCTTTAAATGATATAATTGTGCCTAATAATACAGGAATTATAGGA
AATACCGTTGAAGATACAATAAACAATCTTGGAATGCTATGTAAAGACGGATTTTATAAAGCTGATGATGTAATGCTTTC
TATAGCTTGTAAAGAGGTAATATAG

Upstream 100 bases:

>100_bases
AGTATAAGGCTTTATAATAGATTCAAGATAAGATTTAAATTTTTTGGCATCCTTATTGCTATGTATTACAAGTAGTAGAA
ATTAAAGGGAGTGGGTTAGG

Downstream 100 bases:

>100_bases
TATATAAGATTATAAAGTTCAGGTGGGATTTTTTAGAAAATTTATTTTTCCACCTGAACTTTATAAATATCTGGAATAAA
TAAGTTATACAAGGACTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MSRLSKEEISKRLLELIKDETKPAIGCTEPVAVAFTVATGKKYMAGEVLKIDLKVSKNILKNGKSVTIPNTEVCGLDIAG
ALGEICGDPEEGLFVFKNVNKDYLDKAREMIKNKVVTLNTIENTDPVFVEATLKGEKDEVIAILKGGHTNIEKVIVNGEI
AFEKDNKNEKDNKDCDFMKELSLKDIRKITEDISIEKLDFIMDGIEMNKEAAKEGLKRQKGLTLGSSLLKLQQEGKLGKD
SATIARILTAAGSDLRMGGGMCPIMTSGGSGNQGLCVILPITVVAEDIKAPKEKLQRAVFFGHAVNNFVKKYTGKLSAIC
GCAIAAGIGATAGITWLLGGKDKEINGAILNMLANLTGMVCDGAKGSCAIKLSTSASEAVISAYLALNDIIVPNNTGIIG
NTVEDTINNLGMLCKDGFYKADDVMLSIACKEVI

Sequences:

>Translated_434_residues
MSRLSKEEISKRLLELIKDETKPAIGCTEPVAVAFTVATGKKYMAGEVLKIDLKVSKNILKNGKSVTIPNTEVCGLDIAG
ALGEICGDPEEGLFVFKNVNKDYLDKAREMIKNKVVTLNTIENTDPVFVEATLKGEKDEVIAILKGGHTNIEKVIVNGEI
AFEKDNKNEKDNKDCDFMKELSLKDIRKITEDISIEKLDFIMDGIEMNKEAAKEGLKRQKGLTLGSSLLKLQQEGKLGKD
SATIARILTAAGSDLRMGGGMCPIMTSGGSGNQGLCVILPITVVAEDIKAPKEKLQRAVFFGHAVNNFVKKYTGKLSAIC
GCAIAAGIGATAGITWLLGGKDKEINGAILNMLANLTGMVCDGAKGSCAIKLSTSASEAVISAYLALNDIIVPNNTGIIG
NTVEDTINNLGMLCKDGFYKADDVMLSIACKEVI
>Mature_433_residues
SRLSKEEISKRLLELIKDETKPAIGCTEPVAVAFTVATGKKYMAGEVLKIDLKVSKNILKNGKSVTIPNTEVCGLDIAGA
LGEICGDPEEGLFVFKNVNKDYLDKAREMIKNKVVTLNTIENTDPVFVEATLKGEKDEVIAILKGGHTNIEKVIVNGEIA
FEKDNKNEKDNKDCDFMKELSLKDIRKITEDISIEKLDFIMDGIEMNKEAAKEGLKRQKGLTLGSSLLKLQQEGKLGKDS
ATIARILTAAGSDLRMGGGMCPIMTSGGSGNQGLCVILPITVVAEDIKAPKEKLQRAVFFGHAVNNFVKKYTGKLSAICG
CAIAAGIGATAGITWLLGGKDKEINGAILNMLANLTGMVCDGAKGSCAIKLSTSASEAVISAYLALNDIIVPNNTGIIGN
TVEDTINNLGMLCKDGFYKADDVMLSIACKEVI

Specific function: Unknown

COG id: COG3681

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0597 family [H]

Homologues:

Organism=Escherichia coli, GI48994923, Length=424, Percent_Identity=34.9056603773585, Blast_Score=239, Evalue=2e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005130
- InterPro:   IPR021144 [H]

Pfam domain/function: PF03313 SDH_alpha [H]

EC number: NA

Molecular weight: Translated: 46385; Mature: 46253

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLSKEEISKRLLELIKDETKPAIGCTEPVAVAFTVATGKKYMAGEVLKIDLKVSKNIL
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEHHHHHHHH
KNGKSVTIPNTEVCGLDIAGALGEICGDPEEGLFVFKNVNKDYLDKAREMIKNKVVTLNT
HCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCEEEEEE
IENTDPVFVEATLKGEKDEVIAILKGGHTNIEKVIVNGEIAFEKDNKNEKDNKDCDFMKE
ECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCEEEEECCCCCCCCCCCHHHHHH
LSLKDIRKITEDISIEKLDFIMDGIEMNKEAAKEGLKRQKGLTLGSSLLKLQQEGKLGKD
CCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
SATIARILTAAGSDLRMGGGMCPIMTSGGSGNQGLCVILPITVVAEDIKAPKEKLQRAVF
HHHHHHHHHHCCCCEECCCCCCEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
FGHAVNNFVKKYTGKLSAICGCAIAAGIGATAGITWLLGGKDKEINGAILNMLANLTGMV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHEE
CDGAKGSCAIKLSTSASEAVISAYLALNDIIVPNNTGIIGNTVEDTINNLGMLCKDGFYK
ECCCCCCEEEEEECCHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCC
ADDVMLSIACKEVI
HHHHHEEHHHHHCC
>Mature Secondary Structure 
SRLSKEEISKRLLELIKDETKPAIGCTEPVAVAFTVATGKKYMAGEVLKIDLKVSKNIL
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEHHHHHHHH
KNGKSVTIPNTEVCGLDIAGALGEICGDPEEGLFVFKNVNKDYLDKAREMIKNKVVTLNT
HCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCEEEEEE
IENTDPVFVEATLKGEKDEVIAILKGGHTNIEKVIVNGEIAFEKDNKNEKDNKDCDFMKE
ECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCEEEEECCCCCCCCCCCHHHHHH
LSLKDIRKITEDISIEKLDFIMDGIEMNKEAAKEGLKRQKGLTLGSSLLKLQQEGKLGKD
CCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
SATIARILTAAGSDLRMGGGMCPIMTSGGSGNQGLCVILPITVVAEDIKAPKEKLQRAVF
HHHHHHHHHHCCCCEECCCCCCEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
FGHAVNNFVKKYTGKLSAICGCAIAAGIGATAGITWLLGGKDKEINGAILNMLANLTGMV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHEE
CDGAKGSCAIKLSTSASEAVISAYLALNDIIVPNNTGIIGNTVEDTINNLGMLCKDGFYK
ECCCCCCEEEEEECCHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCC
ADDVMLSIACKEVI
HHHHHEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA