| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is spoIIIAD [H]
Identifier: 226949190
GI number: 226949190
Start: 2165073
End: 2165456
Strand: Reverse
Name: spoIIIAD [H]
Synonym: CLM_2109
Alternate gene names: 226949190
Gene position: 2165456-2165073 (Counterclockwise)
Preceding gene: 226949191
Following gene: 226949189
Centisome position: 52.11
GC content: 27.86
Gene sequence:
>384_bases ATGGAAATCATTAAAATAGTAGCCTTTGCATTTATTTCACTATTTTTAATACTAATATTTAAAGGAAGAAGAGATGATTT AGCAGTCCAAATAAGTATTGCAGCAGGGGTCATAATATTTTTATTTTTAACATCTAAAATAACAGCTATACTTCAATTTA TGCAACAATTAGCTTCAAAAACCAATATAGATTTTATATATTTAAGCACAGTTTTTAAAATATTAGGAATAGCTTATTTG GCTACTTTTTGTAGTGAGATATGCAAAGACGCAGGAGAAAATAGCTTAGCATCAAAAGTAGAATTTGCTGGTAAGATACT AATACTTGGACTTGCCATACCTATACTTATGGCAGTACTTCAATCTATTTTAAAGATTATGTAG
Upstream 100 bases:
>100_bases TTGTAATACTTATGATGGTAATAAATTTGATAAATAAATTATTTAATGCAGTAAAAACCATGTTCCAAATTTAAAATATG CTAAGGCTTAGGAGGGAAAA
Downstream 100 bases:
>100_bases GTGAGAAAATGAAAAAAAGATTAATGACTATTTTATTAACATCTTTATTTATGATTATATTATGTTTCAATGTACAAGCC GCACCTAGCCAGCATAATGA
Product: stage III sporulation protein AD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MEIIKIVAFAFISLFLILIFKGRRDDLAVQISIAAGVIIFLFLTSKITAILQFMQQLASKTNIDFIYLSTVFKILGIAYL ATFCSEICKDAGENSLASKVEFAGKILILGLAIPILMAVLQSILKIM
Sequences:
>Translated_127_residues MEIIKIVAFAFISLFLILIFKGRRDDLAVQISIAAGVIIFLFLTSKITAILQFMQQLASKTNIDFIYLSTVFKILGIAYL ATFCSEICKDAGENSLASKVEFAGKILILGLAIPILMAVLQSILKIM >Mature_127_residues MEIIKIVAFAFISLFLILIFKGRRDDLAVQISIAAGVIIFLFLTSKITAILQFMQQLASKTNIDFIYLSTVFKILGIAYL ATFCSEICKDAGENSLASKVEFAGKILILGLAIPILMAVLQSILKIM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014211 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13964; Mature: 13964
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIIKIVAFAFISLFLILIFKGRRDDLAVQISIAAGVIIFLFLTSKITAILQFMQQLASK CHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TNIDFIYLSTVFKILGIAYLATFCSEICKDAGENSLASKVEFAGKILILGLAIPILMAVL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QSILKIM HHHHHHC >Mature Secondary Structure MEIIKIVAFAFISLFLILIFKGRRDDLAVQISIAAGVIIFLFLTSKITAILQFMQQLASK CHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TNIDFIYLSTVFKILGIAYLATFCSEICKDAGENSLASKVEFAGKILILGLAIPILMAVL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QSILKIM HHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]