| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is spoIIIAE [H]
Identifier: 226949189
GI number: 226949189
Start: 2163901
End: 2165064
Strand: Reverse
Name: spoIIIAE [H]
Synonym: CLM_2108
Alternate gene names: 226949189
Gene position: 2165064-2163901 (Counterclockwise)
Preceding gene: 226949190
Following gene: 226949188
Centisome position: 52.1
GC content: 27.84
Gene sequence:
>1164_bases ATGAAAAAAAGATTAATGACTATTTTATTAACATCTTTATTTATGATTATATTATGTTTCAATGTACAAGCCGCACCTAG CCAGCATAATGAAATAAAGGAAGAAAATGAACAAATAGAAAAACTATATGATTATATATCAAATATGAAAAATCAATATG AGATTTTAAAGGATATAAATGCAAAAGATTATGTAAAAAATTTTATGGAAAAAGGAGAAAGCCAAATTTCTGTAAACAAA GCAGCAAAAGCTATAACTACATATGTATTTAAAGAAATAGCGGCTTCCTTAAAATTAATTGCTCTTCTAATTATGGTGGC TATAATATGTGCTTTGCTGAATAATTTACAAAAGGCCTTTAGTAATGAAACTTTATCTGATATAGCTTATTTTGCCTGTT ATGCATTAATAATAATAATATTAGCTAGAAGTTTTTATTTAGGTGTCAATATAGCTAGAGATACTATAAACAAGATGACA GATTTTATGATGGCTTTAATACCAATTTTAGTAATGCTTATAGCTTCTATAGGAGGTATTGTAGAAGCTACTATGTTAGA TCCTATAATAATAGGAACTATAAATATAAGTGCTAATATATTTTCAAAATTTATAATTCCATTAATATGTATGACCTTTG TTTTGCAGTTTGTAGATAATCTATCAGAGGATTATAAAATAAATAAACTAACAAAATTATTGAATCAAGTAGCTCTTTGG ACTCAAGGAATTGTAATGACTGTATTCGTGGGAGTAGTTACTATAAGAGGTATAACTTCTAAAGCTATGGATCAGGTTAC TGTTAAAACAGCAAAATATGCTGTGGATAATTTTGTACCAGTGGTAGGCAAATGTTTATCTGATGCTATTTCTACTGTAG CTGGTTATTCATTACTTTTAAAAAATTCTATAAGTAGTTTAGGACTTATTGTAATAGTGGCCATGCTTTTAGTGCCTGTT ATAAAGCTTTTAATAATGGCTTTTATGTATAAGATGGCAGCAGCTTTAATAGAGCCTATAAGTGATAGTAGACTTGTAAA TTCTATAGGAGCAGCAGGAGACTCATTAATACTTATATTATCTTGTTTGATATGTGTATCTGTAATGTTTTTTATAATGA TAGCTATAATGGCTTCTGCAGGAAAGGTTTTTATGGGCACATAA
Upstream 100 bases:
>100_bases CAAAAGTAGAATTTGCTGGTAAGATACTAATACTTGGACTTGCCATACCTATACTTATGGCAGTACTTCAATCTATTTTA AAGATTATGTAGGTGAGAAA
Downstream 100 bases:
>100_bases TTTAAAATATAACTTTATAAAGGGGTGATTATATTTTGCTCCAATGGTTAAAAGAGTGGATAACTAATATAGCTGTAGCA GTATTTTTTATAACTGCCAT
Product: stage III sporulation protein AE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MKKRLMTILLTSLFMIILCFNVQAAPSQHNEIKEENEQIEKLYDYISNMKNQYEILKDINAKDYVKNFMEKGESQISVNK AAKAITTYVFKEIAASLKLIALLIMVAIICALLNNLQKAFSNETLSDIAYFACYALIIIILARSFYLGVNIARDTINKMT DFMMALIPILVMLIASIGGIVEATMLDPIIIGTINISANIFSKFIIPLICMTFVLQFVDNLSEDYKINKLTKLLNQVALW TQGIVMTVFVGVVTIRGITSKAMDQVTVKTAKYAVDNFVPVVGKCLSDAISTVAGYSLLLKNSISSLGLIVIVAMLLVPV IKLLIMAFMYKMAAALIEPISDSRLVNSIGAAGDSLILILSCLICVSVMFFIMIAIMASAGKVFMGT
Sequences:
>Translated_387_residues MKKRLMTILLTSLFMIILCFNVQAAPSQHNEIKEENEQIEKLYDYISNMKNQYEILKDINAKDYVKNFMEKGESQISVNK AAKAITTYVFKEIAASLKLIALLIMVAIICALLNNLQKAFSNETLSDIAYFACYALIIIILARSFYLGVNIARDTINKMT DFMMALIPILVMLIASIGGIVEATMLDPIIIGTINISANIFSKFIIPLICMTFVLQFVDNLSEDYKINKLTKLLNQVALW TQGIVMTVFVGVVTIRGITSKAMDQVTVKTAKYAVDNFVPVVGKCLSDAISTVAGYSLLLKNSISSLGLIVIVAMLLVPV IKLLIMAFMYKMAAALIEPISDSRLVNSIGAAGDSLILILSCLICVSVMFFIMIAIMASAGKVFMGT >Mature_387_residues MKKRLMTILLTSLFMIILCFNVQAAPSQHNEIKEENEQIEKLYDYISNMKNQYEILKDINAKDYVKNFMEKGESQISVNK AAKAITTYVFKEIAASLKLIALLIMVAIICALLNNLQKAFSNETLSDIAYFACYALIIIILARSFYLGVNIARDTINKMT DFMMALIPILVMLIASIGGIVEATMLDPIIIGTINISANIFSKFIIPLICMTFVLQFVDNLSEDYKINKLTKLLNQVALW TQGIVMTVFVGVVTIRGITSKAMDQVTVKTAKYAVDNFVPVVGKCLSDAISTVAGYSLLLKNSISSLGLIVIVAMLLVPV IKLLIMAFMYKMAAALIEPISDSRLVNSIGAAGDSLILILSCLICVSVMFFIMIAIMASAGKVFMGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014194 [H]
Pfam domain/function: PF09546 Spore_III_AE [H]
EC number: NA
Molecular weight: Translated: 42593; Mature: 42593
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRLMTILLTSLFMIILCFNVQAAPSQHNEIKEENEQIEKLYDYISNMKNQYEILKDIN CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AKDYVKNFMEKGESQISVNKAAKAITTYVFKEIAASLKLIALLIMVAIICALLNNLQKAF HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNETLSDIAYFACYALIIIILARSFYLGVNIARDTINKMTDFMMALIPILVMLIASIGGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEATMLDPIIIGTINISANIFSKFIIPLICMTFVLQFVDNLSEDYKINKLTKLLNQVALW HHHHHHCHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHH TQGIVMTVFVGVVTIRGITSKAMDQVTVKTAKYAVDNFVPVVGKCLSDAISTVAGYSLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNSISSLGLIVIVAMLLVPVIKLLIMAFMYKMAAALIEPISDSRLVNSIGAAGDSLILIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHH SCLICVSVMFFIMIAIMASAGKVFMGT HHHHHHHHHHHHHHHHHHCCCCHHCCC >Mature Secondary Structure MKKRLMTILLTSLFMIILCFNVQAAPSQHNEIKEENEQIEKLYDYISNMKNQYEILKDIN CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AKDYVKNFMEKGESQISVNKAAKAITTYVFKEIAASLKLIALLIMVAIICALLNNLQKAF HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNETLSDIAYFACYALIIIILARSFYLGVNIARDTINKMTDFMMALIPILVMLIASIGGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEATMLDPIIIGTINISANIFSKFIIPLICMTFVLQFVDNLSEDYKINKLTKLLNQVALW HHHHHHCHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHH TQGIVMTVFVGVVTIRGITSKAMDQVTVKTAKYAVDNFVPVVGKCLSDAISTVAGYSLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNSISSLGLIVIVAMLLVPVIKLLIMAFMYKMAAALIEPISDSRLVNSIGAAGDSLILIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHH SCLICVSVMFFIMIAIMASAGKVFMGT HHHHHHHHHHHHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]