| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is metA [H]
Identifier: 226949172
GI number: 226949172
Start: 2147430
End: 2148326
Strand: Reverse
Name: metA [H]
Synonym: CLM_2090
Alternate gene names: 226949172
Gene position: 2148326-2147430 (Counterclockwise)
Preceding gene: 226949173
Following gene: 226949171
Centisome position: 51.7
GC content: 24.53
Gene sequence:
>897_bases ATGGCTTTAATCATAGATAAAAACCTTCCAGCTTACCAAATATTAAAATCTGAAAATATAAATATAATGGATAAATTAAA TTATAACAAAAATACAAATAAATTAAAACTTATAATATTAAACTTGATGCCTAAAAAAATAGAGGCGGAAACACAAATAC TAAGAGTCTTAGGCAAAAGTTTTATAGATTTAGAGATTACTTTTTTAAAAACTGAAAGTTATAAGAGTAAAAATGTAAGC AATGATCATTTAAATAAATTTTATAAGACTTTTAGTGAAATAAAAAATCATAATTTTCATGGAATGATTATAACCGGTGC TCCAGTAGAACTTATGGATTTTGAAAGAGTAGATTATTGGGAAGAACTTAAAAATATAATGGATTATTGTAATAAAAAAG TAAAATCTACTATATTCATATGTTGGGCAGCTCAAGCAGCCTTATACTACTATTATGATATAAATAAGTATTCATTAAAT AAAAAGCTTTTTGGTGTGTTTCCTCATAAAATAAGTAAAGGAAATTCTTTACTTACTAAAGGTTTTGATGATGAATTTTA TGTACCCCATTCCAGGTATACTTATACAAGAAAAGAAGATATAAAAAGATGCAAAGATATAGAGATAATTTCCGAATCAG AAGAAGCAGGATTATATTTAATGCAAAGCAATAATTTTAAAAAAATATTTATATCAGGACACTGTGAATATGACAGGTAT ACATTATATGAAGAATATATTAGAGATATAAATAAGAATAAGCATATAGACATTCCTAAAAACTATTTTAAAGAAAATAA TTTAAACAAAAAACCTATAATGAGATGGCGTTGTCATGGAGAAACCTTGTTTTTAAATTGGATACAGTTGCTAGAAAAGT TATCAAGTGATTCTTAG
Upstream 100 bases:
>100_bases ATTTAAAAGATAAGCTGGATAGTATACCTAATATTAAAAAATTAAGGGCTACTATAATTTTATTCCATAGCTAAGGGCTA GTTAGCAAAGGAAATAAAAT
Downstream 100 bases:
>100_bases GTACAAGTAAAGTTTGCTTAGAATAATTAATGTTGGCATAGACAGGATAAAAATTGATATGTATTCATAATATAATAATT AAATTTACAACAAAAAATGA
Product: homoserine O-succinyltransferase
Products: NA
Alternate protein names: Homoserine O-transsuccinylase; HTS [H]
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MALIIDKNLPAYQILKSENINIMDKLNYNKNTNKLKLIILNLMPKKIEAETQILRVLGKSFIDLEITFLKTESYKSKNVS NDHLNKFYKTFSEIKNHNFHGMIITGAPVELMDFERVDYWEELKNIMDYCNKKVKSTIFICWAAQAALYYYYDINKYSLN KKLFGVFPHKISKGNSLLTKGFDDEFYVPHSRYTYTRKEDIKRCKDIEIISESEEAGLYLMQSNNFKKIFISGHCEYDRY TLYEEYIRDINKNKHIDIPKNYFKENNLNKKPIMRWRCHGETLFLNWIQLLEKLSSDS
Sequences:
>Translated_298_residues MALIIDKNLPAYQILKSENINIMDKLNYNKNTNKLKLIILNLMPKKIEAETQILRVLGKSFIDLEITFLKTESYKSKNVS NDHLNKFYKTFSEIKNHNFHGMIITGAPVELMDFERVDYWEELKNIMDYCNKKVKSTIFICWAAQAALYYYYDINKYSLN KKLFGVFPHKISKGNSLLTKGFDDEFYVPHSRYTYTRKEDIKRCKDIEIISESEEAGLYLMQSNNFKKIFISGHCEYDRY TLYEEYIRDINKNKHIDIPKNYFKENNLNKKPIMRWRCHGETLFLNWIQLLEKLSSDS >Mature_297_residues ALIIDKNLPAYQILKSENINIMDKLNYNKNTNKLKLIILNLMPKKIEAETQILRVLGKSFIDLEITFLKTESYKSKNVSN DHLNKFYKTFSEIKNHNFHGMIITGAPVELMDFERVDYWEELKNIMDYCNKKVKSTIFICWAAQAALYYYYDINKYSLNK KLFGVFPHKISKGNSLLTKGFDDEFYVPHSRYTYTRKEDIKRCKDIEIISESEEAGLYLMQSNNFKKIFISGHCEYDRYT LYEEYIRDINKNKHIDIPKNYFKENNLNKKPIMRWRCHGETLFLNWIQLLEKLSSDS
Specific function: Methionine biosynthesis; HTS variant; first step. [C]
COG id: COG1897
COG function: function code E; Homoserine trans-succinylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HTS family [H]
Homologues:
Organism=Escherichia coli, GI1790443, Length=289, Percent_Identity=41.8685121107266, Blast_Score=257, Evalue=5e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005697 - ProDom: PD037892 [H]
Pfam domain/function: PF04204 HTS [H]
EC number: =2.3.1.46 [H]
Molecular weight: Translated: 35545; Mature: 35414
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIIDKNLPAYQILKSENINIMDKLNYNKNTNKLKLIILNLMPKKIEAETQILRVLGKS CEEEEECCCCHHHHHCCCCCCEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCC FIDLEITFLKTESYKSKNVSNDHLNKFYKTFSEIKNHNFHGMIITGAPVELMDFERVDYW CEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEECCCHHCHHH EELKNIMDYCNKKVKSTIFICWAAQAALYYYYDINKYSLNKKLFGVFPHKISKGNSLLTK HHHHHHHHHHCHHHHHEEEEEEECCEEEEEEEECCEEECCCCEEEECCCCCCCCCCEEEC GFDDEFYVPHSRYTYTRKEDIKRCKDIEIISESEEAGLYLMQSNNFKKIFISGHCEYDRY CCCCCEECCCCCEEECCHHHHHHHCCCEEECCCCCCCEEEEECCCEEEEEEECCCCCCHH TLYEEYIRDINKNKHIDIPKNYFKENNLNKKPIMRWRCHGETLFLNWIQLLEKLSSDS HHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure ALIIDKNLPAYQILKSENINIMDKLNYNKNTNKLKLIILNLMPKKIEAETQILRVLGKS EEEEECCCCHHHHHCCCCCCEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCC FIDLEITFLKTESYKSKNVSNDHLNKFYKTFSEIKNHNFHGMIITGAPVELMDFERVDYW CEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEECCCHHCHHH EELKNIMDYCNKKVKSTIFICWAAQAALYYYYDINKYSLNKKLFGVFPHKISKGNSLLTK HHHHHHHHHHCHHHHHEEEEEEECCEEEEEEEECCEEECCCCEEEECCCCCCCCCCEEEC GFDDEFYVPHSRYTYTRKEDIKRCKDIEIISESEEAGLYLMQSNNFKKIFISGHCEYDRY CCCCCEECCCCCEEECCHHHHHHHCCCEEECCCCCCCEEEEECCCEEEEEEECCCCCCHH TLYEEYIRDINKNKHIDIPKNYFKENNLNKKPIMRWRCHGETLFLNWIQLLEKLSSDS HHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA