Click here to switch to the map view.

The map label for this gene is yjeM [H]

Identifier: 226949113

GI number: 226949113

Start: 2096314

End: 2097840

Strand: Reverse

Name: yjeM [H]

Synonym: CLM_2031

Alternate gene names: 226949113

Gene position: 2097840-2096314 (Counterclockwise)

Preceding gene: 226949114

Following gene: 226949112

Centisome position: 50.49

GC content: 31.37

Gene sequence:

>1527_bases
ATGTCACAAAATTCACAAACAACTAAAAAATTAACTTTGATACCATTGATATTAATGATTTTTACTTCGGTGTTTGGCTT
TGCTAACATGCCTAGATCTTTTTACTTAATGGGTTATGGTGCTATTCCTTGGTATATTTTATCTGGTGTAACATTCTTTA
TTCCTTATGCATTTATGATGGCAGAGTATGGTGCGGCTTTTAAGGATGAAAAAGGTGGAATTTATTCCTGGATGGAAAAA
TCTGTAGGAGCAAAATATGCTTTTGTAGGAACCTTTATGTGGTATGCATCCTATATAATTTGGATGGTTAACATTTGTTC
CACACTATGGATTCCAATTTCAAATGCAATTTTTGGTAAAGATACTACTTCAACTTGGGCATTCTTGGGATTAAATTCAA
CTCAAGTTTTAGGTGTATTAGGCATAATTTGGATAATACTTGTAACTTTTACTGCTTCTAAAGGATTAGAAAAAATAACT
AAAGTAACTTCTATAGGAGGAACTGCAGTTGCACTTTTAAATATTGTCTTGTTAGTTAGTGCGATAATTATCCTTATAGC
AAATGGTGGACAACTAGCAGAACCTATAACTTCTGTTAAATCTATTGTACAATCTCCAAATCCTGCATATCAGAATCCAA
TTTCTGTATTAGCTTTTATAGTTTTTGCTATATTTGGTTATGGTGGTATAGAAGTTGTTGGAGGACTTGTAGATCAAACT
GAAAACGCTGAGGTAACTTTTCCTAAAGGAATTACTATTGCAGCTATTATCATTGCAGTAGGATATTCAATTGGGATATT
CTTATGTGGCATAGTTACAAATTGGGATAGTGTTTTAGCTTCCAAAGACGTAAATATAGGAAATATAGCATATGCACTAA
TGCATAATTTAGGATATCAATTAGGGCATTCTTTTGGAATTAGCGAAGCATCATCAATATTAATGGGGGATTGGATCGCA
AGATTTGTAGGATTTTCTATGTTTTTAGCTTTAACTGGAGCTTTCTTTACATTATCTTATGCTCCACTAAAACAACTTAT
AGAAGGTACTCCAAATAAATTATGGCCTGGAAAAATGGCCAAAATTGAAAACGGCATGCCTTTAAATGCTATGCGTGTTC
AATGTATAATTGTAGTGGTATTTATTGCATTAGTATCTTTTGGAGGAGACGCAGCAGCTAAGTTTTTTGGAAAATTAATT
CTTATGACTAACGTTGCAATGACTATACCTTATATGTTTTTATCAAGCGCATTCATTTCTTTTAAAAAGAAAACCGAAAT
AAAAAAACCATTTGAAGTTTATAAAACTAGGAAAAGTACAGTTATTGCTGCGGTTGTAGTTACATTTACTATAGCTTTTG
CTAATTTTTTCACAATAATAGAGCCGGCTACAAAGGGCAATATATCAGATACAATATTCTCAATTATTGGACCTATATTT
TTTAGCATAGTTGCTATATTAATGTATAATTCCTATGAGAAAAAGTATGTTATTAAAAGTGAAAAGGGTAAAACTAAAAA
TTTATAA

Upstream 100 bases:

>100_bases
TCACCAATATAATAGAAAAAAATACAAAATATTGAAATTGTAAAGATATAGGTTATAATTAAATTGTAAGAAATAAAATT
ATAGTATGAGGTGGAAAAAT

Downstream 100 bases:

>100_bases
GTTATAATTTATATAAAAATAGAGGGGATACTAAATTTAATCCCTTCTATTTTTTAGTGTTCTAAGTTTTGGAATAATTT
GACAGTAAAAATTCCCTCTA

Product: amino acid permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 508; Mature: 507

Protein sequence:

>508_residues
MSQNSQTTKKLTLIPLILMIFTSVFGFANMPRSFYLMGYGAIPWYILSGVTFFIPYAFMMAEYGAAFKDEKGGIYSWMEK
SVGAKYAFVGTFMWYASYIIWMVNICSTLWIPISNAIFGKDTTSTWAFLGLNSTQVLGVLGIIWIILVTFTASKGLEKIT
KVTSIGGTAVALLNIVLLVSAIIILIANGGQLAEPITSVKSIVQSPNPAYQNPISVLAFIVFAIFGYGGIEVVGGLVDQT
ENAEVTFPKGITIAAIIIAVGYSIGIFLCGIVTNWDSVLASKDVNIGNIAYALMHNLGYQLGHSFGISEASSILMGDWIA
RFVGFSMFLALTGAFFTLSYAPLKQLIEGTPNKLWPGKMAKIENGMPLNAMRVQCIIVVVFIALVSFGGDAAAKFFGKLI
LMTNVAMTIPYMFLSSAFISFKKKTEIKKPFEVYKTRKSTVIAAVVVTFTIAFANFFTIIEPATKGNISDTIFSIIGPIF
FSIVAILMYNSYEKKYVIKSEKGKTKNL

Sequences:

>Translated_508_residues
MSQNSQTTKKLTLIPLILMIFTSVFGFANMPRSFYLMGYGAIPWYILSGVTFFIPYAFMMAEYGAAFKDEKGGIYSWMEK
SVGAKYAFVGTFMWYASYIIWMVNICSTLWIPISNAIFGKDTTSTWAFLGLNSTQVLGVLGIIWIILVTFTASKGLEKIT
KVTSIGGTAVALLNIVLLVSAIIILIANGGQLAEPITSVKSIVQSPNPAYQNPISVLAFIVFAIFGYGGIEVVGGLVDQT
ENAEVTFPKGITIAAIIIAVGYSIGIFLCGIVTNWDSVLASKDVNIGNIAYALMHNLGYQLGHSFGISEASSILMGDWIA
RFVGFSMFLALTGAFFTLSYAPLKQLIEGTPNKLWPGKMAKIENGMPLNAMRVQCIIVVVFIALVSFGGDAAAKFFGKLI
LMTNVAMTIPYMFLSSAFISFKKKTEIKKPFEVYKTRKSTVIAAVVVTFTIAFANFFTIIEPATKGNISDTIFSIIGPIF
FSIVAILMYNSYEKKYVIKSEKGKTKNL
>Mature_507_residues
SQNSQTTKKLTLIPLILMIFTSVFGFANMPRSFYLMGYGAIPWYILSGVTFFIPYAFMMAEYGAAFKDEKGGIYSWMEKS
VGAKYAFVGTFMWYASYIIWMVNICSTLWIPISNAIFGKDTTSTWAFLGLNSTQVLGVLGIIWIILVTFTASKGLEKITK
VTSIGGTAVALLNIVLLVSAIIILIANGGQLAEPITSVKSIVQSPNPAYQNPISVLAFIVFAIFGYGGIEVVGGLVDQTE
NAEVTFPKGITIAAIIIAVGYSIGIFLCGIVTNWDSVLASKDVNIGNIAYALMHNLGYQLGHSFGISEASSILMGDWIAR
FVGFSMFLALTGAFFTLSYAPLKQLIEGTPNKLWPGKMAKIENGMPLNAMRVQCIIVVVFIALVSFGGDAAAKFFGKLIL
MTNVAMTIPYMFLSSAFISFKKKTEIKKPFEVYKTRKSTVIAAVVVTFTIAFANFFTIIEPATKGNISDTIFSIIGPIFF
SIVAILMYNSYEKKYVIKSEKGKTKNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI87082380, Length=492, Percent_Identity=54.2682926829268, Blast_Score=537, Evalue=1e-154,
Organism=Escherichia coli, GI87081798, Length=459, Percent_Identity=23.9651416122004, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI48994921, Length=472, Percent_Identity=25.4237288135593, Blast_Score=105, Evalue=9e-24,
Organism=Escherichia coli, GI1787768, Length=483, Percent_Identity=21.3250517598344, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 55447; Mature: 55316

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNSQTTKKLTLIPLILMIFTSVFGFANMPRSFYLMGYGAIPWYILSGVTFFIPYAFMM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
AEYGAAFKDEKGGIYSWMEKSVGAKYAFVGTFMWYASYIIWMVNICSTLWIPISNAIFGK
HHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DTTSTWAFLGLNSTQVLGVLGIIWIILVTFTASKGLEKITKVTSIGGTAVALLNIVLLVS
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AIIILIANGGQLAEPITSVKSIVQSPNPAYQNPISVLAFIVFAIFGYGGIEVVGGLVDQT
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCC
ENAEVTFPKGITIAAIIIAVGYSIGIFLCGIVTNWDSVLASKDVNIGNIAYALMHNLGYQ
CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LGHSFGISEASSILMGDWIARFVGFSMFLALTGAFFTLSYAPLKQLIEGTPNKLWPGKMA
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
KIENGMPLNAMRVQCIIVVVFIALVSFGGDAAAKFFGKLILMTNVAMTIPYMFLSSAFIS
HHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKKKTEIKKPFEVYKTRKSTVIAAVVVTFTIAFANFFTIIEPATKGNISDTIFSIIGPIF
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
FSIVAILMYNSYEKKYVIKSEKGKTKNL
HHHHHHHHHCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure 
SQNSQTTKKLTLIPLILMIFTSVFGFANMPRSFYLMGYGAIPWYILSGVTFFIPYAFMM
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
AEYGAAFKDEKGGIYSWMEKSVGAKYAFVGTFMWYASYIIWMVNICSTLWIPISNAIFGK
HHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DTTSTWAFLGLNSTQVLGVLGIIWIILVTFTASKGLEKITKVTSIGGTAVALLNIVLLVS
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AIIILIANGGQLAEPITSVKSIVQSPNPAYQNPISVLAFIVFAIFGYGGIEVVGGLVDQT
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCC
ENAEVTFPKGITIAAIIIAVGYSIGIFLCGIVTNWDSVLASKDVNIGNIAYALMHNLGYQ
CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LGHSFGISEASSILMGDWIARFVGFSMFLALTGAFFTLSYAPLKQLIEGTPNKLWPGKMA
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
KIENGMPLNAMRVQCIIVVVFIALVSFGGDAAAKFFGKLILMTNVAMTIPYMFLSSAFIS
HHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKKKTEIKKPFEVYKTRKSTVIAAVVVTFTIAFANFFTIIEPATKGNISDTIFSIIGPIF
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
FSIVAILMYNSYEKKYVIKSEKGKTKNL
HHHHHHHHHCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]