| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
Click here to switch to the map view.
The map label for this gene is hisC [H]
Identifier: 226948902
GI number: 226948902
Start: 1843051
End: 1844115
Strand: Direct
Name: hisC [H]
Synonym: CLM_1812
Alternate gene names: 226948902
Gene position: 1843051-1844115 (Clockwise)
Preceding gene: 226948901
Following gene: 226948903
Centisome position: 44.35
GC content: 27.23
Gene sequence:
>1065_bases ATGAGTAAATATTGGAGCAATATAACTAAAGATATAGAACCCTATGTATGTGGAGAGCAACCTAAGAATAAAAAAATTAT AAAGTTAAATACTAATGAAAATCCATATCCTCCGTCACCTAAGGTATTGCAAGCTATAGAAAATGCTGCCAAGGATGATT TAAGATTATATCCAGATCCAAATTGCGATGCCTTAAGAAAAACTATAGCTAATTACTACAATTTAAGTAAGGAAGAAGTT TTTATAGGAAATGGCTCTGATGAGGTTTTATCCCTTTCTTTTTTAACTTTTTTTAATCCAGAAGAGACTATAGTTTTTTC AGATATTAGTTATAGTTTTTACCCTGTTTATGCAAATTTATATAAATTAGATTATAAGTTAGCAAAACTTAAAGAAGATT TTTCTATAGATATTAATGACTTTAAAAATGCAAGAGGAGGAGCTGTTATAACAAATCCTAACGCACCAACAGGGGTGTAT CTTTCCTTAGATTCAATAAAACAAATTTTAGAGGATAATATAAATAATGTGGTTATGGTTGATGAAGCTTATATTGATTT TGGAGGAGAATCTTCAGTAAGTCTTATAAAGGATTATCCTAATCTTTTAGTAATACAAACCTTATCGAAATCTCGATCTT TAGCTGGAATGAGAATAGGATTTGCTTTAGGACAAAAGGAGCTTATAGAGGGGTTAAATAGGATAAAAAATTCTTTTAAT TCCTATACAATAGATAGAATTTCATCTTTAGCAGCTATAGAAGCCATAAAGGATGAAGAATATTTTAAGGAATGTACACT AAAAGTAATAAAAACACGAAATTGGACTATAAATGAACTAGGAAAAATAGGATTTAAAATCATACCATCTAAAGCTAATT TTATATTTATTACTCATGATACATATCAAGCTGAAGATATTTTTATAAAGCTAAAGGATGAAAATGTACTTGTTAGATAC TTTAATAAAGATAGAATAAGTAATTATTTAAGAGTTAGTATAGGTTCTAAAGAAGAAATGGAGATTTTTATGGATAAAAT AAAGAAGATTATAAATAAATTATAG
Upstream 100 bases:
>100_bases AAGAAATGGATGTTTATGGAGCTATTGTAGGTAAAGCTATATATTCAGGGAATATTAATTTGAATGAAGCTATTAAAATT ATAAACAAGGGGAGTTCTAA
Downstream 100 bases:
>100_bases TTACTATATAAATAAAAATATATAGAAAGTATATATTAGAACATTATATATTTGGAAGATATAGATACAAAGAATAGGTT TAAAAATATAGTAAGTAAAA
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase [H]
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MSKYWSNITKDIEPYVCGEQPKNKKIIKLNTNENPYPPSPKVLQAIENAAKDDLRLYPDPNCDALRKTIANYYNLSKEEV FIGNGSDEVLSLSFLTFFNPEETIVFSDISYSFYPVYANLYKLDYKLAKLKEDFSIDINDFKNARGGAVITNPNAPTGVY LSLDSIKQILEDNINNVVMVDEAYIDFGGESSVSLIKDYPNLLVIQTLSKSRSLAGMRIGFALGQKELIEGLNRIKNSFN SYTIDRISSLAAIEAIKDEEYFKECTLKVIKTRNWTINELGKIGFKIIPSKANFIFITHDTYQAEDIFIKLKDENVLVRY FNKDRISNYLRVSIGSKEEMEIFMDKIKKIINKL
Sequences:
>Translated_354_residues MSKYWSNITKDIEPYVCGEQPKNKKIIKLNTNENPYPPSPKVLQAIENAAKDDLRLYPDPNCDALRKTIANYYNLSKEEV FIGNGSDEVLSLSFLTFFNPEETIVFSDISYSFYPVYANLYKLDYKLAKLKEDFSIDINDFKNARGGAVITNPNAPTGVY LSLDSIKQILEDNINNVVMVDEAYIDFGGESSVSLIKDYPNLLVIQTLSKSRSLAGMRIGFALGQKELIEGLNRIKNSFN SYTIDRISSLAAIEAIKDEEYFKECTLKVIKTRNWTINELGKIGFKIIPSKANFIFITHDTYQAEDIFIKLKDENVLVRY FNKDRISNYLRVSIGSKEEMEIFMDKIKKIINKL >Mature_353_residues SKYWSNITKDIEPYVCGEQPKNKKIIKLNTNENPYPPSPKVLQAIENAAKDDLRLYPDPNCDALRKTIANYYNLSKEEVF IGNGSDEVLSLSFLTFFNPEETIVFSDISYSFYPVYANLYKLDYKLAKLKEDFSIDINDFKNARGGAVITNPNAPTGVYL SLDSIKQILEDNINNVVMVDEAYIDFGGESSVSLIKDYPNLLVIQTLSKSRSLAGMRIGFALGQKELIEGLNRIKNSFNS YTIDRISSLAAIEAIKDEEYFKECTLKVIKTRNWTINELGKIGFKIIPSKANFIFITHDTYQAEDIFIKLKDENVLVRYF NKDRISNYLRVSIGSKEEMEIFMDKIKKIINKL
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=351, Percent_Identity=25.0712250712251, Blast_Score=119, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6322075, Length=378, Percent_Identity=29.1005291005291, Blast_Score=128, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 40495; Mature: 40364
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKYWSNITKDIEPYVCGEQPKNKKIIKLNTNENPYPPSPKVLQAIENAAKDDLRLYPDP CCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEECCCC NCDALRKTIANYYNLSKEEVFIGNGSDEVLSLSFLTFFNPEETIVFSDISYSFYPVYANL CHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCEEEHHHHHH YKLDYKLAKLKEDFSIDINDFKNARGGAVITNPNAPTGVYLSLDSIKQILEDNINNVVMV HHHHHHHHHHCCCCEEEHHHCCCCCCCEEEECCCCCCEEEEEHHHHHHHHHCCCCCEEEE DEAYIDFGGESSVSLIKDYPNLLVIQTLSKSRSLAGMRIGFALGQKELIEGLNRIKNSFN EEEEEECCCCCCHHHHHCCCCEEEEEEHHCCCCCCCEEEHHHCCHHHHHHHHHHHHHHHC SYTIDRISSLAAIEAIKDEEYFKECTLKVIKTRNWTINELGKIGFKIIPSKANFIFITHD CEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEECCCCEEEEECC TYQAEDIFIKLKDENVLVRYFNKDRISNYLRVSIGSKEEMEIFMDKIKKIINKL CEECCEEEEEEECCCEEEEEECHHHHCCEEEEECCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKYWSNITKDIEPYVCGEQPKNKKIIKLNTNENPYPPSPKVLQAIENAAKDDLRLYPDP CCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEECCCC NCDALRKTIANYYNLSKEEVFIGNGSDEVLSLSFLTFFNPEETIVFSDISYSFYPVYANL CHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCEEEHHHHHH YKLDYKLAKLKEDFSIDINDFKNARGGAVITNPNAPTGVYLSLDSIKQILEDNINNVVMV HHHHHHHHHHCCCCEEEHHHCCCCCCCEEEECCCCCCEEEEEHHHHHHHHHCCCCCEEEE DEAYIDFGGESSVSLIKDYPNLLVIQTLSKSRSLAGMRIGFALGQKELIEGLNRIKNSFN EEEEEECCCCCCHHHHHCCCCEEEEEEHHCCCCCCCEEEHHHCCHHHHHHHHHHHHHHHC SYTIDRISSLAAIEAIKDEEYFKECTLKVIKTRNWTINELGKIGFKIIPSKANFIFITHD CEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEECCCCEEEEECC TYQAEDIFIKLKDENVLVRYFNKDRISNYLRVSIGSKEEMEIFMDKIKKIINKL CEECCEEEEEEECCCEEEEEECHHHHCCEEEEECCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA