| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
Click here to switch to the map view.
The map label for this gene is hisH [H]
Identifier: 226948900
GI number: 226948900
Start: 1841724
End: 1842329
Strand: Direct
Name: hisH [H]
Synonym: CLM_1810
Alternate gene names: 226948900
Gene position: 1841724-1842329 (Clockwise)
Preceding gene: 226948899
Following gene: 226948901
Centisome position: 44.32
GC content: 30.03
Gene sequence:
>606_bases GTGATTTCAATTGTGGATTATGGTATGGGAAATTTAAAAAGTGTAGAAAATGCACTTGATTTTTTAGGTATAAAGTCTGT AATTACATCAGAGAGAGAAGTAATTTTAAATAGCGATGGAATAATATTACCAGGAGTGGGAGCTTTTCCAGATGCCATTA ATAACATTAAAAGAGAGGGTATTGATAAAGTTTTAAAGGAAGCAGTAAAAAAGGATAAACCTTTACTTGGAATATGTCTT GGAATGCAGCTTTTATTTGAAGAAAGTGAAGAAATTAAAAGCTATAGAGGATTAGGTTTTTTAAAAGGAAAAATAGAAAA AATGAAGGTAAATTTAAAAATACCTCATATGGGCTGGAATAATTTAAGTTTTTGTAAAGATTCCCCAATACTTAAGGGGA TAAAACAGAGGAGTTATGTGTATTATGTTCACTCTTATTATGCAAAAATTGAAGAGGAAGGAATATTAAATGCCTATTCC CAATATGGAATAGAGGTACCGGGGATAGTAAGTAAAAATAATATTTATGGAATACAGTTTCATCCTGAAAAAAGTGGGGA TATAGGACTCAAAATATTAAGTAATTTTGGGGAGCTGATAAAATGA
Upstream 100 bases:
>100_bases ACAATTATGTTTATTATTAAATATTACAAGCTTTACAATGAGTAATAGGGGATATATAAAGCCAATAACATTAAAAAAGA AATATAAGGGGGACAAATAG
Downstream 100 bases:
>100_bases TAATTTTACCTGCCATAGATTTAAAAGAGGGTAAATGTATTAGATTATACCAAGGAGATTTTAAAGCTTCAAAGGTGGTA GCAGAAGATCCTATAGAGGT
Product: imidazole glycerol phosphate synthase subunit HisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MISIVDYGMGNLKSVENALDFLGIKSVITSEREVILNSDGIILPGVGAFPDAINNIKREGIDKVLKEAVKKDKPLLGICL GMQLLFEESEEIKSYRGLGFLKGKIEKMKVNLKIPHMGWNNLSFCKDSPILKGIKQRSYVYYVHSYYAKIEEEGILNAYS QYGIEVPGIVSKNNIYGIQFHPEKSGDIGLKILSNFGELIK
Sequences:
>Translated_201_residues MISIVDYGMGNLKSVENALDFLGIKSVITSEREVILNSDGIILPGVGAFPDAINNIKREGIDKVLKEAVKKDKPLLGICL GMQLLFEESEEIKSYRGLGFLKGKIEKMKVNLKIPHMGWNNLSFCKDSPILKGIKQRSYVYYVHSYYAKIEEEGILNAYS QYGIEVPGIVSKNNIYGIQFHPEKSGDIGLKILSNFGELIK >Mature_201_residues MISIVDYGMGNLKSVENALDFLGIKSVITSEREVILNSDGIILPGVGAFPDAINNIKREGIDKVLKEAVKKDKPLLGICL GMQLLFEESEEIKSYRGLGFLKGKIEKMKVNLKIPHMGWNNLSFCKDSPILKGIKQRSYVYYVHSYYAKIEEEGILNAYS QYGIEVPGIVSKNNIYGIQFHPEKSGDIGLKILSNFGELIK
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=199, Percent_Identity=37.1859296482412, Blast_Score=135, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6319725, Length=208, Percent_Identity=33.6538461538462, Blast_Score=115, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 22447; Mature: 22447
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISIVDYGMGNLKSVENALDFLGIKSVITSEREVILNSDGIILPGVGAFPDAINNIKREG CEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEECCCCCCHHHHHHHHHHH IDKVLKEAVKKDKPLLGICLGMQLLFEESEEIKSYRGLGFLKGKIEKMKVNLKIPHMGWN HHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHCEEEEEEEEEEECCCCCC NLSFCKDSPILKGIKQRSYVYYVHSYYAKIEEEGILNAYSQYGIEVPGIVSKNNIYGIQF CCCCCCCCHHHHHHHHCCEEEEHHHHHHHHHHCHHHHHHHHCCCCCCCEEECCCEEEEEE HPEKSGDIGLKILSNFGELIK CCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MISIVDYGMGNLKSVENALDFLGIKSVITSEREVILNSDGIILPGVGAFPDAINNIKREG CEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEECCCCCCHHHHHHHHHHH IDKVLKEAVKKDKPLLGICLGMQLLFEESEEIKSYRGLGFLKGKIEKMKVNLKIPHMGWN HHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHCEEEEEEEEEEECCCCCC NLSFCKDSPILKGIKQRSYVYYVHSYYAKIEEEGILNAYSQYGIEVPGIVSKNNIYGIQF CCCCCCCCHHHHHHHHCCEEEEHHHHHHHHHHCHHHHHHHHCCCCCCCEEECCCEEEEEE HPEKSGDIGLKILSNFGELIK CCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]