| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is hisB [H]
Identifier: 226948899
GI number: 226948899
Start: 1841006
End: 1841596
Strand: Direct
Name: hisB [H]
Synonym: CLM_1809
Alternate gene names: 226948899
Gene position: 1841006-1841596 (Clockwise)
Preceding gene: 226948898
Following gene: 226948900
Centisome position: 44.31
GC content: 32.66
Gene sequence:
>591_bases ATGAAAGAAAGCATAGCTAAAGTTTATAGAAAAACTGGAGAAACAGAAATAAAGTCGGAAATTAATTTATATGGAGAAGG AAAATATGATATAAAAACCGGTATAGGTTTTTTTGATCATATGTTAAATCTTATGGCAAGGCATGGACTTATTGATGTAA AACTAGAGGCAAAAGGTGACTTACAGGTAGATTCTCATCATACCGTGGAGGATGTAGGCATAGTTTTAGGTGAAAGTTTT AAAAAAGCTCTAGGGGATAAAAAAGGTATTAAAAGATACGGAACTAGTTTTGTTCCTATGGATGAAGCCTTAGCCAGTGT GTCTATAGATATAAGTGGAAGACCATATATAGTATGTGATTTTAACTTTACTGTAGACAAATTAGGTGGAATGGATACAG AATTAGTGGAAGAATTTTTAAGAGCATTGGCTTTTAACGTTGGAATAACTTTACATGCTAGAGTATTATATGGTAAGAAT AATCATCATATGATAGAAGCGGTTTTTAAAGCTTTAGGCAGAGCTCTTAGGGAAGCTGTAGATAGAGATGAAAAAATAAA TGGGGTTATGTCTACTAAAGGTACACTATAG
Upstream 100 bases:
>100_bases TAGATAAATAGTAGTTTAATATGTTTCCTATAAAAATACAATTGGAACAGTTTATAATTATTAAATAAAATTCATATACC ATGGAAAAGAGGATAAAGTT
Downstream 100 bases:
>100_bases AAATAATAAATATGAATTATATTAGAAACAATTATGTTTATTATTAAATATTACAAGCTTTACAATGAGTAATAGGGGAT ATATAAAGCCAATAACATTA
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD [H]
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MKESIAKVYRKTGETEIKSEINLYGEGKYDIKTGIGFFDHMLNLMARHGLIDVKLEAKGDLQVDSHHTVEDVGIVLGESF KKALGDKKGIKRYGTSFVPMDEALASVSIDISGRPYIVCDFNFTVDKLGGMDTELVEEFLRALAFNVGITLHARVLYGKN NHHMIEAVFKALGRALREAVDRDEKINGVMSTKGTL
Sequences:
>Translated_196_residues MKESIAKVYRKTGETEIKSEINLYGEGKYDIKTGIGFFDHMLNLMARHGLIDVKLEAKGDLQVDSHHTVEDVGIVLGESF KKALGDKKGIKRYGTSFVPMDEALASVSIDISGRPYIVCDFNFTVDKLGGMDTELVEEFLRALAFNVGITLHARVLYGKN NHHMIEAVFKALGRALREAVDRDEKINGVMSTKGTL >Mature_196_residues MKESIAKVYRKTGETEIKSEINLYGEGKYDIKTGIGFFDHMLNLMARHGLIDVKLEAKGDLQVDSHHTVEDVGIVLGESF KKALGDKKGIKRYGTSFVPMDEALASVSIDISGRPYIVCDFNFTVDKLGGMDTELVEEFLRALAFNVGITLHARVLYGKN NHHMIEAVFKALGRALREAVDRDEKINGVMSTKGTL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=197, Percent_Identity=46.7005076142132, Blast_Score=183, Evalue=8e-48, Organism=Saccharomyces cerevisiae, GI6324776, Length=220, Percent_Identity=40.4545454545455, Blast_Score=164, Evalue=7e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =4.2.1.19 [H]
Molecular weight: Translated: 21752; Mature: 21752
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKESIAKVYRKTGETEIKSEINLYGEGKYDIKTGIGFFDHMLNLMARHGLIDVKLEAKGD CCHHHHHHHHHCCCHHHHHHEEEECCCCEEHHHHHHHHHHHHHHHHHCCEEEEEEECCCC LQVDSHHTVEDVGIVLGESFKKALGDKKGIKRYGTSFVPMDEALASVSIDISGRPYIVCD EEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHEEEEEECCCCEEEEE FNFTVDKLGGMDTELVEEFLRALAFNVGITLHARVLYGKNNHHMIEAVFKALGRALREAV CCCCHHHHCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH DRDEKINGVMSTKGTL CCHHHCCCHHCCCCCC >Mature Secondary Structure MKESIAKVYRKTGETEIKSEINLYGEGKYDIKTGIGFFDHMLNLMARHGLIDVKLEAKGD CCHHHHHHHHHCCCHHHHHHEEEECCCCEEHHHHHHHHHHHHHHHHHCCEEEEEEECCCC LQVDSHHTVEDVGIVLGESFKKALGDKKGIKRYGTSFVPMDEALASVSIDISGRPYIVCD EEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHEEEEEECCCCEEEEE FNFTVDKLGGMDTELVEEFLRALAFNVGITLHARVLYGKNNHHMIEAVFKALGRALREAV CCCCHHHHCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH DRDEKINGVMSTKGTL CCHHHCCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA