Click here to switch to the map view.

The map label for this gene is 226948845

Identifier: 226948845

GI number: 226948845

Start: 1784465

End: 1786675

Strand: Direct

Name: 226948845

Synonym: CLM_1747

Alternate gene names: NA

Gene position: 1784465-1786675 (Clockwise)

Preceding gene: 226948844

Following gene: 226948846

Centisome position: 42.94

GC content: 23.84

Gene sequence:

>2211_bases
ATGGTTTTATCTAAAAGAATTAAAAGAGTTATAAAATCTAATAAGGGTTCCTATATAGGGTGTACTTTATTGGTTTTATT
AAGTTGTATACTTTTTTCATCATTTAATATAGCATTTAGAAATATAGATAAAAATTTTAAAGAATTCGTTAAGGATTATA
ATATAGATTCTGCTAAATTTATGGTAAATAAACCTATAGAGAATATAAAAAATATAGAAGATAAATTTAATCTATCGTTG
GAAAAAAGATATGAAATGGATTATAACTTAGATGATTCTACATCAAGAATATTTAGTAAAACATCAAAAATAAATAAAGC
TTATATTATACAGGGGAGAAATTTAAAAAATAAAAATGAGATACTTTTAGATCCATATTTTTCAAGGGAGAAAAATATAA
ATTTAGGAGATAAAATAAAAATACAAGGACAAGATTTTAAAGTAGTAGGCTTTTTTTCAATACCAGACTATATCTATCCC
TTAAAATCTGAAACAGATCTTATATGGGATGCAAAAAAATTTGGCATAGCTTGTATGCCAGAGGAAAATATGAAAAAATT
AAAGGGAATAAGGACTTTTTACCACACAGTGTTTAAAGAAAATAATGAAAATGACTTTAAAAAATATATAGAAGAAAAAT
ATAATATAGTATCCTATACAGAAAGAGATAATAATGTAAGATATACTCTTGTAAAAACTAAGATGGATAGTTCTATATTA
ATGGCCATAAGTATGCCTATGATTATAATTTTGTTAACTTCTACTCTTTTAGCTATAGTAATGTGGAGGATTATAAAAAC
AGATTTAAAGCAGATTGGAACTTTGTATGCTTTAGGTTATAAGAAAAGTGAAATATTAAAGCATTATATAAGTTATCCTA
TTATAATTGGTATTATTGGAGGAGTAATAGGCACCTTATTAGGAATAGTTTTATCAAAACCTTTAGATACACTTATGAGA
AATTATTTTAACATACCTTTAATAAAAGAAAATTATAGCATAAATTATATTATTTTAAGTCCAATAATACCATCATTTTT
CTTAATTCTAGCTTCATTTATTGTAATATTAAAAGTTTTAAAGATGTCTCCTGTTAATCTTATGAAGGGTTTTAAAAATA
AGGGAAGAATAAACAAAATAGAAAAAAAATTAAAACTCTACAAATTTAAGTTTAAAAATAAGTTTAAAATAAGAGAAATT
ACAAGAAATATAGGAAGAACTACTATTTTATTAGTGGGGATAACTATAGCTTCTATGCTTTTACTTATGGGGTTTATGAT
TAAAGACTCCATGGACTCTTTAATAAAAGCTCAGAATAATATAAACCAATATGAGTATAATTACATTTTAAAAACCCTTC
AAATACAAAAAAATTATGCTGGGGAAAAATATAATGTATCCTCTTTTAAAGTGCAGAATGATGAAGAACCTATACCTATA
TATGGTATAGATAAAGATTCAAAGCTTATAAGTTTAAAAGATTCAAAGGGAGAAAAAATACAGTTTAATAAAGTCATATT
AACTAAGGCTTTAGCAGAAAAATTGAATATTAATAAGGGAGATAGAATAAAGATATATAATATTTATAAGGATAAAGAGT
TTTTTATAAATATAGATGAAATAGCAGATAACTATAGTACTAAAAGTATATATATACCTCTTGATAAATTTAATACTATG
ATGAATTATGAAAAGAATAGTTATATAGGGGTATATTCAAAAGAAAAATTAGATATAGATGAAAATTTAATATTCAAAGT
AGAAAGTAAAAAGGAAACAGAGGAAGCCTTTAAAACTATGATACAACCTATGAAATATTCTCTTACTATCATGGCCATTT
TCGCTTTTATAATTGCTCTAATTGTAATATATGTTGTAACTTCTATAATTGTAGAAGAAAACAAGGGTAATATATCTATG
TTAAAAGTATTAGGATATAAAAAGGAAGAAATAAATTCCCTAATACTAGACACAGAAAAAATTCCTGTTCTAATAGGTTA
TCTGCTTTCTATACCTATATTAAAAATATTCATGGGAGAGCTTATGAAAAAGGTAGCGGAAGATACCAATTTTTCCATAC
CTATGAATATTTCCATAAAATATATTATAATAGGCTTTGTAATAATATATTTAACCTATGAAATATCAAAAATATTCTCT
AAGAGAAAAATTTTAGCCATATCTATGGTAGAGTTTACGAAGACTGAATAG

Upstream 100 bases:

>100_bases
AGCTTCCATAAGTGACAAGATAGTAAAGATTAGGGATGGGGCAATTTCTGAATTTATAGATAATAAAGAAAAGATTTCAG
CAGAGATGGTGGTGTGGTAA

Downstream 100 bases:

>100_bases
GAGAAAAATTTATGAATGATAATTTAAAGAATATACCAAAAGATAAAAAAGAGGCCATACTAGAAGCTGCGTTGGAAGAA
TTCGCTATAGGTGGATATGA

Product: efflux ABC transporter permease

Products: NA

Alternate protein names: ABC Transporter Permease Protein; Efflux ABC Transporter Permease Protein; Peptide ABC Transporter Permease; Efflux ABC Transporter Permease; ABC Transporter Permease; Antimicrobial Peptide ABC Transporter Permease

Number of amino acids: Translated: 736; Mature: 736

Protein sequence:

>736_residues
MVLSKRIKRVIKSNKGSYIGCTLLVLLSCILFSSFNIAFRNIDKNFKEFVKDYNIDSAKFMVNKPIENIKNIEDKFNLSL
EKRYEMDYNLDDSTSRIFSKTSKINKAYIIQGRNLKNKNEILLDPYFSREKNINLGDKIKIQGQDFKVVGFFSIPDYIYP
LKSETDLIWDAKKFGIACMPEENMKKLKGIRTFYHTVFKENNENDFKKYIEEKYNIVSYTERDNNVRYTLVKTKMDSSIL
MAISMPMIIILLTSTLLAIVMWRIIKTDLKQIGTLYALGYKKSEILKHYISYPIIIGIIGGVIGTLLGIVLSKPLDTLMR
NYFNIPLIKENYSINYIILSPIIPSFFLILASFIVILKVLKMSPVNLMKGFKNKGRINKIEKKLKLYKFKFKNKFKIREI
TRNIGRTTILLVGITIASMLLLMGFMIKDSMDSLIKAQNNINQYEYNYILKTLQIQKNYAGEKYNVSSFKVQNDEEPIPI
YGIDKDSKLISLKDSKGEKIQFNKVILTKALAEKLNINKGDRIKIYNIYKDKEFFINIDEIADNYSTKSIYIPLDKFNTM
MNYEKNSYIGVYSKEKLDIDENLIFKVESKKETEEAFKTMIQPMKYSLTIMAIFAFIIALIVIYVVTSIIVEENKGNISM
LKVLGYKKEEINSLILDTEKIPVLIGYLLSIPILKIFMGELMKKVAEDTNFSIPMNISIKYIIIGFVIIYLTYEISKIFS
KRKILAISMVEFTKTE

Sequences:

>Translated_736_residues
MVLSKRIKRVIKSNKGSYIGCTLLVLLSCILFSSFNIAFRNIDKNFKEFVKDYNIDSAKFMVNKPIENIKNIEDKFNLSL
EKRYEMDYNLDDSTSRIFSKTSKINKAYIIQGRNLKNKNEILLDPYFSREKNINLGDKIKIQGQDFKVVGFFSIPDYIYP
LKSETDLIWDAKKFGIACMPEENMKKLKGIRTFYHTVFKENNENDFKKYIEEKYNIVSYTERDNNVRYTLVKTKMDSSIL
MAISMPMIIILLTSTLLAIVMWRIIKTDLKQIGTLYALGYKKSEILKHYISYPIIIGIIGGVIGTLLGIVLSKPLDTLMR
NYFNIPLIKENYSINYIILSPIIPSFFLILASFIVILKVLKMSPVNLMKGFKNKGRINKIEKKLKLYKFKFKNKFKIREI
TRNIGRTTILLVGITIASMLLLMGFMIKDSMDSLIKAQNNINQYEYNYILKTLQIQKNYAGEKYNVSSFKVQNDEEPIPI
YGIDKDSKLISLKDSKGEKIQFNKVILTKALAEKLNINKGDRIKIYNIYKDKEFFINIDEIADNYSTKSIYIPLDKFNTM
MNYEKNSYIGVYSKEKLDIDENLIFKVESKKETEEAFKTMIQPMKYSLTIMAIFAFIIALIVIYVVTSIIVEENKGNISM
LKVLGYKKEEINSLILDTEKIPVLIGYLLSIPILKIFMGELMKKVAEDTNFSIPMNISIKYIIIGFVIIYLTYEISKIFS
KRKILAISMVEFTKTE
>Mature_736_residues
MVLSKRIKRVIKSNKGSYIGCTLLVLLSCILFSSFNIAFRNIDKNFKEFVKDYNIDSAKFMVNKPIENIKNIEDKFNLSL
EKRYEMDYNLDDSTSRIFSKTSKINKAYIIQGRNLKNKNEILLDPYFSREKNINLGDKIKIQGQDFKVVGFFSIPDYIYP
LKSETDLIWDAKKFGIACMPEENMKKLKGIRTFYHTVFKENNENDFKKYIEEKYNIVSYTERDNNVRYTLVKTKMDSSIL
MAISMPMIIILLTSTLLAIVMWRIIKTDLKQIGTLYALGYKKSEILKHYISYPIIIGIIGGVIGTLLGIVLSKPLDTLMR
NYFNIPLIKENYSINYIILSPIIPSFFLILASFIVILKVLKMSPVNLMKGFKNKGRINKIEKKLKLYKFKFKNKFKIREI
TRNIGRTTILLVGITIASMLLLMGFMIKDSMDSLIKAQNNINQYEYNYILKTLQIQKNYAGEKYNVSSFKVQNDEEPIPI
YGIDKDSKLISLKDSKGEKIQFNKVILTKALAEKLNINKGDRIKIYNIYKDKEFFINIDEIADNYSTKSIYIPLDKFNTM
MNYEKNSYIGVYSKEKLDIDENLIFKVESKKETEEAFKTMIQPMKYSLTIMAIFAFIIALIVIYVVTSIIVEENKGNISM
LKVLGYKKEEINSLILDTEKIPVLIGYLLSIPILKIFMGELMKKVAEDTNFSIPMNISIKYIIIGFVIIYLTYEISKIFS
KRKILAISMVEFTKTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85479; Mature: 85479

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLSKRIKRVIKSNKGSYIGCTLLVLLSCILFSSFNIAFRNIDKNFKEFVKDYNIDSAKF
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCCCHHE
MVNKPIENIKNIEDKFNLSLEKRYEMDYNLDDSTSRIFSKTSKINKAYIIQGRNLKNKNE
EECCCHHHHHCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCC
ILLDPYFSREKNINLGDKIKIQGQDFKVVGFFSIPDYIYPLKSETDLIWDAKKFGIACMP
EEECCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCHHCCCCCCCCEEEEHHHCCEEECC
EENMKKLKGIRTFYHTVFKENNENDFKKYIEEKYNIVSYTERDNNVRYTLVKTKMDSSIL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEEECCCCEEEEEEEECCCCHHH
MAISMPMIIILLTSTLLAIVMWRIIKTDLKQIGTLYALGYKKSEILKHYISYPIIIGIIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GVIGTLLGIVLSKPLDTLMRNYFNIPLIKENYSINYIILSPIIPSFFLILASFIVILKVL
HHHHHHHHHHHHCCHHHHHHHHCCCCEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
KMSPVNLMKGFKNKGRINKIEKKLKLYKFKFKNKFKIREITRNIGRTTILLVGITIASML
HCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEHHHHHHHHHH
LLMGFMIKDSMDSLIKAQNNINQYEYNYILKTLQIQKNYAGEKYNVSSFKVQNDEEPIPI
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCE
YGIDKDSKLISLKDSKGEKIQFNKVILTKALAEKLNINKGDRIKIYNIYKDKEFFINIDE
EECCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEEHHH
IADNYSTKSIYIPLDKFNTMMNYEKNSYIGVYSKEKLDIDENLIFKVESKKETEEAFKTM
HCCCCCCCEEEEEHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEECCCCHHHHHHHHH
IQPMKYSLTIMAIFAFIIALIVIYVVTSIIVEENKGNISMLKVLGYKKEEINSLILDTEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCHHHHHHHHCCCCH
IPVLIGYLLSIPILKIFMGELMKKVAEDTNFSIPMNISIKYIIIGFVIIYLTYEISKIFS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHC
KRKILAISMVEFTKTE
CCCEEEEEEEHHCCCC
>Mature Secondary Structure
MVLSKRIKRVIKSNKGSYIGCTLLVLLSCILFSSFNIAFRNIDKNFKEFVKDYNIDSAKF
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCCCHHE
MVNKPIENIKNIEDKFNLSLEKRYEMDYNLDDSTSRIFSKTSKINKAYIIQGRNLKNKNE
EECCCHHHHHCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCC
ILLDPYFSREKNINLGDKIKIQGQDFKVVGFFSIPDYIYPLKSETDLIWDAKKFGIACMP
EEECCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCHHCCCCCCCCEEEEHHHCCEEECC
EENMKKLKGIRTFYHTVFKENNENDFKKYIEEKYNIVSYTERDNNVRYTLVKTKMDSSIL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEEECCCCEEEEEEEECCCCHHH
MAISMPMIIILLTSTLLAIVMWRIIKTDLKQIGTLYALGYKKSEILKHYISYPIIIGIIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GVIGTLLGIVLSKPLDTLMRNYFNIPLIKENYSINYIILSPIIPSFFLILASFIVILKVL
HHHHHHHHHHHHCCHHHHHHHHCCCCEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
KMSPVNLMKGFKNKGRINKIEKKLKLYKFKFKNKFKIREITRNIGRTTILLVGITIASML
HCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEHHHHHHHHHH
LLMGFMIKDSMDSLIKAQNNINQYEYNYILKTLQIQKNYAGEKYNVSSFKVQNDEEPIPI
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCE
YGIDKDSKLISLKDSKGEKIQFNKVILTKALAEKLNINKGDRIKIYNIYKDKEFFINIDE
EECCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEEHHH
IADNYSTKSIYIPLDKFNTMMNYEKNSYIGVYSKEKLDIDENLIFKVESKKETEEAFKTM
HCCCCCCCEEEEEHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEECCCCHHHHHHHHH
IQPMKYSLTIMAIFAFIIALIVIYVVTSIIVEENKGNISMLKVLGYKKEEINSLILDTEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCHHHHHHHHCCCCH
IPVLIGYLLSIPILKIFMGELMKKVAEDTNFSIPMNISIKYIIIGFVIIYLTYEISKIFS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHC
KRKILAISMVEFTKTE
CCCEEEEEEEHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA