Click here to switch to the map view.

The map label for this gene is 226948357

Identifier: 226948357

GI number: 226948357

Start: 1291222

End: 1291947

Strand: Direct

Name: 226948357

Synonym: CLM_1239

Alternate gene names: NA

Gene position: 1291222-1291947 (Clockwise)

Preceding gene: 226948356

Following gene: 226948358

Centisome position: 31.07

GC content: 28.1

Gene sequence:

>726_bases
ATGAACATTGCAGCATTTTTTGATATTGATGGAACTCTATACAGAGAAGGACTTATAACAGAGGTTTTTAAAAAGTTAGT
AAAATATGACATTATTGAATCAGAGAGATGGTATAATGAAGTAAGACCAGAATATGTAAAATGGGATAAAAGACAAGGTA
ATTATGATAATTATCTTTTAAAAATGGCAGGCATATATATAGAAGCTATCAAAGGATTGCATAAATCACAAATAGAATTT
ATTGCAAAAAAAGTAGTGGAACAAAAGGGTGATAGAGTATATACATTTACTAGAGATAGTATTAAATGGCATAAGGAGCA
AGGACATAAAATAATAACTATATCAGGAAGTCCTTATGAACTAGTAAAAGAAATGGCATCTAAATACGGATTTGATGATT
TTAGAGGAGCTCAATATGTGCTTAATAAAGAAAGTATTTATACAGGAGATGTTATTCCTATGTGGGATAGTGACAGTAAG
AGAAAGGCTATAAATGAACTAGTAGAAAAATATGATATAGATTTAAAGAAAAGTTATGCTTATGGAGATACTTCTGGAGA
TTTTTCTATGTTTAAAATGGTGGAAAATCCTATTTGTGTAAACCCTACAAAGGAATTAATTCAGAAAGTAGTAGAGAATG
AAGATGTAAAAGAAAAGACAAAAATAATAGTAGAAAGAAAAGATATGGTATATAAATTAACACCAGAATCTATTAATTTA
TGGTAA

Upstream 100 bases:

>100_bases
CTTTTTCTTTTGTTATATAAAGCATATAATAGATAAAAACTAATAATTGTATTTGATAGTATTTAAAGTGAATTTTTATT
GATTATTAAGGAGGGTTATT

Downstream 100 bases:

>100_bases
TAAACAACAGTTAACTTGACAAATAAATTTTAAATTTTTTGAAGTAAAGATATATATGAAGTTTTATATATTTGGAGGGA
TTAGTTAATTTTAAAATTGA

Product: haloacid dehalogenase

Products: L-serine; D-serine; phosphate

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MNIAAFFDIDGTLYREGLITEVFKKLVKYDIIESERWYNEVRPEYVKWDKRQGNYDNYLLKMAGIYIEAIKGLHKSQIEF
IAKKVVEQKGDRVYTFTRDSIKWHKEQGHKIITISGSPYELVKEMASKYGFDDFRGAQYVLNKESIYTGDVIPMWDSDSK
RKAINELVEKYDIDLKKSYAYGDTSGDFSMFKMVENPICVNPTKELIQKVVENEDVKEKTKIIVERKDMVYKLTPESINL
W

Sequences:

>Translated_241_residues
MNIAAFFDIDGTLYREGLITEVFKKLVKYDIIESERWYNEVRPEYVKWDKRQGNYDNYLLKMAGIYIEAIKGLHKSQIEF
IAKKVVEQKGDRVYTFTRDSIKWHKEQGHKIITISGSPYELVKEMASKYGFDDFRGAQYVLNKESIYTGDVIPMWDSDSK
RKAINELVEKYDIDLKKSYAYGDTSGDFSMFKMVENPICVNPTKELIQKVVENEDVKEKTKIIVERKDMVYKLTPESINL
W
>Mature_241_residues
MNIAAFFDIDGTLYREGLITEVFKKLVKYDIIESERWYNEVRPEYVKWDKRQGNYDNYLLKMAGIYIEAIKGLHKSQIEF
IAKKVVEQKGDRVYTFTRDSIKWHKEQGHKIITISGSPYELVKEMASKYGFDDFRGAQYVLNKESIYTGDVIPMWDSDSK
RKAINELVEKYDIDLKKSYAYGDTSGDFSMFKMVENPICVNPTKELIQKVVENEDVKEKTKIIVERKDMVYKLTPESINL
W

Specific function: Unknown

COG id: COG0560

COG function: function code E; Phosphoserine phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the serB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR006383
- InterPro:   IPR006385 [H]

Pfam domain/function: NA

EC number: 3.1.3.3

Molecular weight: Translated: 28356; Mature: 28356

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIAAFFDIDGTLYREGLITEVFKKLVKYDIIESERWYNEVRPEYVKWDKRQGNYDNYLL
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHCCCCCCHHHHHH
KMAGIYIEAIKGLHKSQIEFIAKKVVEQKGDRVYTFTRDSIKWHKEQGHKIITISGSPYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCEEEEECCCHHH
LVKEMASKYGFDDFRGAQYVLNKESIYTGDVIPMWDSDSKRKAINELVEKYDIDLKKSYA
HHHHHHHHCCCCCCCCCCEEECCCCEEECCEEECCCCCHHHHHHHHHHHHHCCCHHHHCC
YGDTSGDFSMFKMVENPICVNPTKELIQKVVENEDVKEKTKIIVERKDMVYKLTPESINL
CCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHEECCEEEEECCCCCCC
W
C
>Mature Secondary Structure
MNIAAFFDIDGTLYREGLITEVFKKLVKYDIIESERWYNEVRPEYVKWDKRQGNYDNYLL
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHCCCCCCHHHHHH
KMAGIYIEAIKGLHKSQIEFIAKKVVEQKGDRVYTFTRDSIKWHKEQGHKIITISGSPYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCEEEEECCCHHH
LVKEMASKYGFDDFRGAQYVLNKESIYTGDVIPMWDSDSKRKAINELVEKYDIDLKKSYA
HHHHHHHHCCCCCCCCCCEEECCCCEEECCEEECCCCCHHHHHHHHHHHHHCCCHHHHCC
YGDTSGDFSMFKMVENPICVNPTKELIQKVVENEDVKEKTKIIVERKDMVYKLTPESINL
CCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHEECCEEEEECCCCCCC
W
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-O-phosphoserine; D-O-phosphoserine; H2O

Specific reaction: L(or D)-O-phosphoserine + H2O = L(or D)-serine + phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA