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The map label for this gene is 226948271

Identifier: 226948271

GI number: 226948271

Start: 1192879

End: 1193310

Strand: Direct

Name: 226948271

Synonym: CLM_1151

Alternate gene names: NA

Gene position: 1192879-1193310 (Clockwise)

Preceding gene: 226948270

Following gene: 226948273

Centisome position: 28.71

GC content: 32.87

Gene sequence:

>432_bases
ATGGATGAACTAGATATAATAAATGAAAATCAATTAGGTATAGCCGCTGAAAATGAAAAGATTAAAACTGATTTAGAAGG
TCAATTTAGAGCTGAAACTGGGGAGGTTGGTTTATATATAGCAATGGCAAGAGTAGCTCAAAGACAAGGTTTCCCAGAAA
TAGCAGAGGTATTAAAGGTAATTGCTAAAGAAGAGGCAGAACATGCAGCTAGGTATGCAGAATTAAATGGGAAAGTTTCT
GACTGTACGAAAGAAAACCTACAAAAAATGCTGCAGGGCGAGATAGGATCAAATAAAATGAAAAAATCTTTAGCAGTAAA
AGCTAAAGAAGAAAATATAGATGAAGTACATGATTTTATAGATGAAGCCTCTAGAGATGAAGCAAGACATGCAAAGATGT
TAAAAGGATTATTAGATAGATATTTTCAATAA

Upstream 100 bases:

>100_bases
AATTTTAAACCATTTTTCAAAAACTAACAAAGGATTCGCTAATTAATATTTCATTATAAGGTAATTAGTAAATAAAGTTA
GATGAGAAAGGGGTATTTTC

Downstream 100 bases:

>100_bases
ACTAGGTATATGAAAATAAGTGAATAATTTATAAATATTTACTAAAAGAGGGTGTATCAAAATAAATTTAATTTTGATGC
ACCCTCTAAATTTTATACGA

Product: rubrerythrin family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MDELDIINENQLGIAAENEKIKTDLEGQFRAETGEVGLYIAMARVAQRQGFPEIAEVLKVIAKEEAEHAARYAELNGKVS
DCTKENLQKMLQGEIGSNKMKKSLAVKAKEENIDEVHDFIDEASRDEARHAKMLKGLLDRYFQ

Sequences:

>Translated_143_residues
MDELDIINENQLGIAAENEKIKTDLEGQFRAETGEVGLYIAMARVAQRQGFPEIAEVLKVIAKEEAEHAARYAELNGKVS
DCTKENLQKMLQGEIGSNKMKKSLAVKAKEENIDEVHDFIDEASRDEARHAKMLKGLLDRYFQ
>Mature_143_residues
MDELDIINENQLGIAAENEKIKTDLEGQFRAETGEVGLYIAMARVAQRQGFPEIAEVLKVIAKEEAEHAARYAELNGKVS
DCTKENLQKMLQGEIGSNKMKKSLAVKAKEENIDEVHDFIDEASRDEARHAKMLKGLLDRYFQ

Specific function: Unknown

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ferritin-like diiron domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 16122; Mature: 16122

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDELDIINENQLGIAAENEKIKTDLEGQFRAETGEVGLYIAMARVAQRQGFPEIAEVLKV
CCCCCCCCCCCCCEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
IAKEEAEHAARYAELNGKVSDCTKENLQKMLQGEIGSNKMKKSLAVKAKEENIDEVHDFI
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHH
DEASRDEARHAKMLKGLLDRYFQ
HHHCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDELDIINENQLGIAAENEKIKTDLEGQFRAETGEVGLYIAMARVAQRQGFPEIAEVLKV
CCCCCCCCCCCCCEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
IAKEEAEHAARYAELNGKVSDCTKENLQKMLQGEIGSNKMKKSLAVKAKEENIDEVHDFI
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHH
DEASRDEARHAKMLKGLLDRYFQ
HHHCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]