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The map label for this gene is 226948173

Identifier: 226948173

GI number: 226948173

Start: 1095517

End: 1097124

Strand: Direct

Name: 226948173

Synonym: CLM_1047

Alternate gene names: NA

Gene position: 1095517-1097124 (Clockwise)

Preceding gene: 226948172

Following gene: 226948175

Centisome position: 26.36

GC content: 27.43

Gene sequence:

>1608_bases
ATGAAGAAGAAAATATACTCGAGTTTCATAGTACTATCTTTAATTATTTCTATGGCACTAATTTATTTTTTAATGCCAGT
TTTTTCAGTGAAATTTTATTCTTTTTATATTGTTTTTATAATAATTGCACTACTTTTAAGTATTAATGTAAGTTTAAACA
AAGGTAAGGAAAGTTCCAAAATATATGGGATTCCTGTTATATTAATAGGGTTATTTATTGTAATGTTTATAATTAGTTTG
CCTATATTTAGAGCTAGTAGCTATAAGAAATTATTACCTACACCTAAATATGAGGAATTTTCAAAGAATATAACTCCAAT
TGATATAAAAGAAATTCCAACAGTGAATCAAAAATATGCAGAATTATTAGCAGATAAAAAACTAGGGGAAGAAACTTCTT
TAGGTAGTAAGGTAGAACTTGGTACTTTAACACTACAAAATGTGAATGGTAAGCTTTTTTATGTGGCTCCTTTAGTACAT
TCTGGTTTTATGAAATGGCTTTTAAATGATAGCACACCAGGATATATAACAGTATCTGCAACGGATGATAAGGATGTAAA
GTTAGTAACAAAATTAAATGGAAAAGATATAAAAATAAGATATCAACCAAAGGGTTTTTTAAATGATGATTTAAAAAGAC
ATATATACTTGAAAGGAACAATGAATAAAGGTATAACAGATTTAACTTTTGAATTAGATGATAAGGGAAATCCATATTAT
ACAGCTACTATATATGAAAACAAAGTGGGGATGTCAGGACAAAAAGCAGTAGGAACAGCCATAGTTAATCCAGAAACAGG
AGAAGTTAAAAAATATACTGTGGAAAATACTCCTAAATGGGTAGACAGAATACAGCCACAATCCTTTGTAGAGAATAATC
TAAAAAAATGGGGAAAATACATTAAGGGATTCTTTAATTTTTCAGGACAAGACAAGTTAAAAACCACAGAAGGAACAGGG
GTAATATATAATAATGGTAAATGTTATTATTACACAGGATTAACTTCTGTAGGTAAGGACGAATCAAGTATAGGTTTTGC
TTTAGTAGATACAAGAACCCAACAAACAAGAATATTTAAAATAGCAGGGGCTACAGAAACAGCTTCTATGAAATCTGCAG
AGGGTAAAGTGCAAAATTTAGGATATACATCTACTTTTCCTATATTAATAAATGTGGATAATATACCTACTTATTTTACA
ACTTTAAATGATAAAAATGATCTAACAAAAATGTTTGCTATGATTTCTGTAACAGACTACAATATCATAGGAACAGGAGA
AAATATTACAGAATGTAAATCAAATTACATTAAAAACTTAGCAAGTAAAGGAAATTTAATAAATGTAGGTTCTACAGGAA
AAGAAGAAAATATAACAGATACTATAGAAAGAATAAATTCTTATGTGGTAGGAAATTCTACAATATACACATTTGTATTA
AAAGATCATAAAGATAAAATATTTAATGCTGGTATATCTATTTCTAACGAATTGCCTATAACTAAAGAAGGGGACAAAGT
AAATATAAGATATGTAGATACAAAACAGGATACTATAAATATAACTAGCTTTGATAATATAGAGTTTAAGCAGCAAAGTA
TTAAATAA

Upstream 100 bases:

>100_bases
ATAAATATTAGGATGAAGATTTACGTTAATAAAAGACTTTTCAAAAAAATAAATGTGAAAAGTTATATACATATTATTTA
AAATTTTAGGGGGGATTTTT

Downstream 100 bases:

>100_bases
AATATATTAGAAGAAATAAGTAGAAAATAAATTTAAAAAGAGATGTGTCAAAATAGCCTTAATTTTAAAACCGTAAATAT
AAATAATACATTCATAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MKKKIYSSFIVLSLIISMALIYFLMPVFSVKFYSFYIVFIIIALLLSINVSLNKGKESSKIYGIPVILIGLFIVMFIISL
PIFRASSYKKLLPTPKYEEFSKNITPIDIKEIPTVNQKYAELLADKKLGEETSLGSKVELGTLTLQNVNGKLFYVAPLVH
SGFMKWLLNDSTPGYITVSATDDKDVKLVTKLNGKDIKIRYQPKGFLNDDLKRHIYLKGTMNKGITDLTFELDDKGNPYY
TATIYENKVGMSGQKAVGTAIVNPETGEVKKYTVENTPKWVDRIQPQSFVENNLKKWGKYIKGFFNFSGQDKLKTTEGTG
VIYNNGKCYYYTGLTSVGKDESSIGFALVDTRTQQTRIFKIAGATETASMKSAEGKVQNLGYTSTFPILINVDNIPTYFT
TLNDKNDLTKMFAMISVTDYNIIGTGENITECKSNYIKNLASKGNLINVGSTGKEENITDTIERINSYVVGNSTIYTFVL
KDHKDKIFNAGISISNELPITKEGDKVNIRYVDTKQDTINITSFDNIEFKQQSIK

Sequences:

>Translated_535_residues
MKKKIYSSFIVLSLIISMALIYFLMPVFSVKFYSFYIVFIIIALLLSINVSLNKGKESSKIYGIPVILIGLFIVMFIISL
PIFRASSYKKLLPTPKYEEFSKNITPIDIKEIPTVNQKYAELLADKKLGEETSLGSKVELGTLTLQNVNGKLFYVAPLVH
SGFMKWLLNDSTPGYITVSATDDKDVKLVTKLNGKDIKIRYQPKGFLNDDLKRHIYLKGTMNKGITDLTFELDDKGNPYY
TATIYENKVGMSGQKAVGTAIVNPETGEVKKYTVENTPKWVDRIQPQSFVENNLKKWGKYIKGFFNFSGQDKLKTTEGTG
VIYNNGKCYYYTGLTSVGKDESSIGFALVDTRTQQTRIFKIAGATETASMKSAEGKVQNLGYTSTFPILINVDNIPTYFT
TLNDKNDLTKMFAMISVTDYNIIGTGENITECKSNYIKNLASKGNLINVGSTGKEENITDTIERINSYVVGNSTIYTFVL
KDHKDKIFNAGISISNELPITKEGDKVNIRYVDTKQDTINITSFDNIEFKQQSIK
>Mature_535_residues
MKKKIYSSFIVLSLIISMALIYFLMPVFSVKFYSFYIVFIIIALLLSINVSLNKGKESSKIYGIPVILIGLFIVMFIISL
PIFRASSYKKLLPTPKYEEFSKNITPIDIKEIPTVNQKYAELLADKKLGEETSLGSKVELGTLTLQNVNGKLFYVAPLVH
SGFMKWLLNDSTPGYITVSATDDKDVKLVTKLNGKDIKIRYQPKGFLNDDLKRHIYLKGTMNKGITDLTFELDDKGNPYY
TATIYENKVGMSGQKAVGTAIVNPETGEVKKYTVENTPKWVDRIQPQSFVENNLKKWGKYIKGFFNFSGQDKLKTTEGTG
VIYNNGKCYYYTGLTSVGKDESSIGFALVDTRTQQTRIFKIAGATETASMKSAEGKVQNLGYTSTFPILINVDNIPTYFT
TLNDKNDLTKMFAMISVTDYNIIGTGENITECKSNYIKNLASKGNLINVGSTGKEENITDTIERINSYVVGNSTIYTFVL
KDHKDKIFNAGISISNELPITKEGDKVNIRYVDTKQDTINITSFDNIEFKQQSIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60045; Mature: 60045

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS00622 HTH_LUXR_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKIYSSFIVLSLIISMALIYFLMPVFSVKFYSFYIVFIIIALLLSINVSLNKGKESSK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCE
IYGIPVILIGLFIVMFIISLPIFRASSYKKLLPTPKYEEFSKNITPIDIKEIPTVNQKYA
EECHHHHHHHHHHHHHHHHCCHHCCCCCHHHCCCCCHHHHHCCCCCCCHHCCCCCCHHHH
ELLADKKLGEETSLGSKVELGTLTLQNVNGKLFYVAPLVHSGFMKWLLNDSTPGYITVSA
HHHHHHCCCCCCCCCCEEEEEEEEEECCCCEEEEEEHHHHHHHHHHHCCCCCCCEEEEEE
TDDKDVKLVTKLNGKDIKIRYQPKGFLNDDLKRHIYLKGTMNKGITDLTFELDDKGNPYY
CCCCCEEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCEE
TATIYENKVGMSGQKAVGTAIVNPETGEVKKYTVENTPKWVDRIQPQSFVENNLKKWGKY
EEEEEECCCCCCCCCCCCEEEECCCCCCEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHH
IKGFFNFSGQDKLKTTEGTGVIYNNGKCYYYTGLTSVGKDESSIGFALVDTRTQQTRIFK
HHHHHCCCCCCCEEECCCCEEEEECCEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEE
IAGATETASMKSAEGKVQNLGYTSTFPILINVDNIPTYFTTLNDKNDLTKMFAMISVTDY
EECCCCCCCCCCCCCCHHHCCCCEECEEEEEECCCCEEEEEECCCHHHHHHHHHEEEECE
NIIGTGENITECKSNYIKNLASKGNLINVGSTGKEENITDTIERINSYVVGNSTIYTFVL
EEEECCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHCEEECCCEEEEEEE
KDHKDKIFNAGISISNELPITKEGDKVNIRYVDTKQDTINITSFDNIEFKQQSIK
ECCCCHHEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHCCC
>Mature Secondary Structure
MKKKIYSSFIVLSLIISMALIYFLMPVFSVKFYSFYIVFIIIALLLSINVSLNKGKESSK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCE
IYGIPVILIGLFIVMFIISLPIFRASSYKKLLPTPKYEEFSKNITPIDIKEIPTVNQKYA
EECHHHHHHHHHHHHHHHHCCHHCCCCCHHHCCCCCHHHHHCCCCCCCHHCCCCCCHHHH
ELLADKKLGEETSLGSKVELGTLTLQNVNGKLFYVAPLVHSGFMKWLLNDSTPGYITVSA
HHHHHHCCCCCCCCCCEEEEEEEEEECCCCEEEEEEHHHHHHHHHHHCCCCCCCEEEEEE
TDDKDVKLVTKLNGKDIKIRYQPKGFLNDDLKRHIYLKGTMNKGITDLTFELDDKGNPYY
CCCCCEEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCEE
TATIYENKVGMSGQKAVGTAIVNPETGEVKKYTVENTPKWVDRIQPQSFVENNLKKWGKY
EEEEEECCCCCCCCCCCCEEEECCCCCCEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHH
IKGFFNFSGQDKLKTTEGTGVIYNNGKCYYYTGLTSVGKDESSIGFALVDTRTQQTRIFK
HHHHHCCCCCCCEEECCCCEEEEECCEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEE
IAGATETASMKSAEGKVQNLGYTSTFPILINVDNIPTYFTTLNDKNDLTKMFAMISVTDY
EECCCCCCCCCCCCCCHHHCCCCEECEEEEEECCCCEEEEEECCCHHHHHHHHHEEEECE
NIIGTGENITECKSNYIKNLASKGNLINVGSTGKEENITDTIERINSYVVGNSTIYTFVL
EEEECCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHCEEECCCEEEEEEE
KDHKDKIFNAGISISNELPITKEGDKVNIRYVDTKQDTINITSFDNIEFKQQSIK
ECCCCHHEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA