Click here to switch to the map view.

The map label for this gene is 226948083

Identifier: 226948083

GI number: 226948083

Start: 1005737

End: 1006066

Strand: Direct

Name: 226948083

Synonym: CLM_0946

Alternate gene names: NA

Gene position: 1005737-1006066 (Clockwise)

Preceding gene: 226948082

Following gene: 226948084

Centisome position: 24.2

GC content: 28.48

Gene sequence:

>330_bases
ATGGACAAATTTCAAAGTGGACTTCTAGCAATTAGTTCAGCAACCTTATTAATTTTTATTATTTATACACTAGTAAATGA
AAAGAAGTCATCTAAGTGGTTTAAGTGGTACAATCAAATGGATAGTGAAGAACAGAAAAAATATAATCCTATAATTGCTG
TTCATAAACTGAAAAGAGTGCTTTTTTTAATAGTATTGGTTGGAATTTCTGGATTCTTAATATCATTCTATATTCCATCA
ATTTCCATGGCTGCATTTGTTTTAATTTTTATTATTCTTCTTGTTTCTATAGGATATTTGGGACCAAGAGGATGTAAGAT
TGAGAAGTGA

Upstream 100 bases:

>100_bases
TAAAGATTTTATTTAAAAAGTGTGGTCAATGTGAATAACTGAAAAGTAAAGATTATTCATATAATCTTTAGATAAATAGT
AATTTGATGGAGGAATTGAT

Downstream 100 bases:

>100_bases
ATTAAATTTGTAAATTCCAATTTGATATTGAGTAATATAAATTAGAATTTAGTTTAGTAGTTGTAACTAAGGAGAGCTTA
TGAAAAAGACTATTGTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MDKFQSGLLAISSATLLIFIIYTLVNEKKSSKWFKWYNQMDSEEQKKYNPIIAVHKLKRVLFLIVLVGISGFLISFYIPS
ISMAAFVLIFIILLVSIGYLGPRGCKIEK

Sequences:

>Translated_109_residues
MDKFQSGLLAISSATLLIFIIYTLVNEKKSSKWFKWYNQMDSEEQKKYNPIIAVHKLKRVLFLIVLVGISGFLISFYIPS
ISMAAFVLIFIILLVSIGYLGPRGCKIEK
>Mature_109_residues
MDKFQSGLLAISSATLLIFIIYTLVNEKKSSKWFKWYNQMDSEEQKKYNPIIAVHKLKRVLFLIVLVGISGFLISFYIPS
ISMAAFVLIFIILLVSIGYLGPRGCKIEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12451; Mature: 12451

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKFQSGLLAISSATLLIFIIYTLVNEKKSSKWFKWYNQMDSEEQKKYNPIIAVHKLKRV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCHHHHHHHHHHH
LFLIVLVGISGFLISFYIPSISMAAFVLIFIILLVSIGYLGPRGCKIEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDKFQSGLLAISSATLLIFIIYTLVNEKKSSKWFKWYNQMDSEEQKKYNPIIAVHKLKRV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCHHHHHHHHHHH
LFLIVLVGISGFLISFYIPSISMAAFVLIFIILLVSIGYLGPRGCKIEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA