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The map label for this gene is 226947969

Identifier: 226947969

GI number: 226947969

Start: 889634

End: 891436

Strand: Direct

Name: 226947969

Synonym: CLM_0828

Alternate gene names: NA

Gene position: 889634-891436 (Clockwise)

Preceding gene: 226947968

Following gene: 226947970

Centisome position: 21.41

GC content: 39.27

Gene sequence:

>1803_bases
ATGAAAAGCTATCTTAGTTTAATCCCCATTTCTGCCAAAGTACACAGACGGCAAAACCACATGACGTTTCTGTGTATTAT
ATTTGCCGTATTTTTGGTAACTGCTGTTTTTAGCATGGCAGATATGGGTGTTAAAATGGAGAAAACAAGATTAATGAATA
AGCATGGAAGTCAAGCAGTACAAGAACTTGGTAAAAGTGTAGCGGCGCAAACTCTATATTCTACAGCTGCTGTGCTGTTT
GTGCTTATACTGATTGCAGGGGTGCTGATGATTTCAAGCAGCATAAATAGTAATGTTGCTCAAAGGACAAAGTTTTTCGG
AATGATGCGTTGCATTGGAATGAGCAAACAACAGATTATCCGTTTTGTCAAACTGGAAGCACTTAATTGGTGCAAAACTG
CGGTTCCAATAGGTATTATACTTGGGATTGTAGTCACATGGGGATTATGTGCTGGGCTACGATTTCTTGTCGGCGGAGAA
TTCTCCGATATACCCCTTTGGGGAGTCAGTCCAGCAGGTATTATCATCGGAATAATTGTGGGAGTTGTTACAGTACTCAT
TGCCGCCAGGTCTCCGGCAAAACGAGCTGCAAAGGTATCGCCTGTAACAGCAGTATCGGGCAATTCGGAAAACACAAAAA
ATGCAACCCATGCGGTGAATGCCAGTTTTTCAAAAATTGAAACTGCTCTTGGTATTCATCATGCAGTATCGGGAAAGAAA
AACTTAATACTTATGACAAGCTCCTTTGCTCTTAGCATTATCCTGTTTTTGAGCTTTTCAGTCTTAATAGAGTTTATCGG
CTATATTATGCCCCAGTCATCGAATACTTCTGACATCAACATTTTTAGTAATAACACTTCAAATTCGCTAGACAGTGTAC
TGCTTGATAAAATAAGTGGTATGTCAGGTGTAAAACATGTTTTTGGCCGAAGAAGCTGTTTTGATGTTCCGGCAGAAGTA
AATTCTAAAACAAACACGATTGATATGATTTCCTATGATGATTATGATTTTGACTGCCTTATAAAAGATAAGCAACTTAG
AAAAGGCAGCGATATTTCAAAAGTGTATGGGAACAGTAATTACGTACTTACAATCTGGGACAAGGACAGACCTTTAAAGA
TAGGCGATAAAATACAAGTAGGCAATAATGAACTGGAAATCGCAGGGCTGTTAAAATGTAACCCATTTAGTGATAACGGT
ACTCCAAATGGGAAAATAACACTCATTACTTCTGGGAAAACTTTTACTCGCCTTACCGGCGTAACCGACTATTCACTTAT
TATGATACAGACGACAAAAGACGCAACGGAAGGAAATGTTGAAGCCATCCGTAATGTAGTAGGCGAAAAGTACAAGTTTA
GTGACCAACGCGACCAACAGACTGCCAGCACATATATGGCGTTTATGTTGTTTGTATATGGATTTTTGGCAATTATCACC
TTGGTTACTGTATTAAATATTATGAACAGTATTTCCATGAGTGTATCAGCAAGAATAAAGCAATATGGAGCCATGCGCGC
GGTCGGTATGGACGAGCATCAGATTATCAAAATGATAGCCTCCGAAGCGTTTACCTATTCTATATCCGGTTGTATTGTCG
GAGTTGTAGTTGGTCTGTTCATTAGCAAGTTACTATATGACAATCTTATTACTGCTCATTTTAGCTACGCTACTTGGAGT
ATTCCTATTATGCCTATAATTATTGTGCTTTTGGTTGTTGCGATTACGGCTATCGCTGCGGTCTATGCTCCGTCAAAACG
GATTCGGAATATGGCGGTAACTGATACAATCAATGAACTGTAA

Upstream 100 bases:

>100_bases
CCATTGTTATGATTACCCATAGCCGAAGTATCGCACAGACTGCAGATCGAATAATACAAGTGTCTGATGGTATACTGACC
GATTTAGGGAGGTGCCGCGA

Downstream 100 bases:

>100_bases
TGGTGCTATTTATATAAACGGAAAGAAAGATTAAACCAGACTGAATACTCTACTATCTGCTGTACGACGGTAAAAGAAAA
AAAGCCGTCGTACAGCAGAC

Product: ABC transporter permease

Products: NA

Alternate protein names: ABC Transporter Permease Protein; Permease; ABC Transporter Permease; ATP Transporter Permease; ABC Transport System Permease Protein

Number of amino acids: Translated: 600; Mature: 600

Protein sequence:

>600_residues
MKSYLSLIPISAKVHRRQNHMTFLCIIFAVFLVTAVFSMADMGVKMEKTRLMNKHGSQAVQELGKSVAAQTLYSTAAVLF
VLILIAGVLMISSSINSNVAQRTKFFGMMRCIGMSKQQIIRFVKLEALNWCKTAVPIGIILGIVVTWGLCAGLRFLVGGE
FSDIPLWGVSPAGIIIGIIVGVVTVLIAARSPAKRAAKVSPVTAVSGNSENTKNATHAVNASFSKIETALGIHHAVSGKK
NLILMTSSFALSIILFLSFSVLIEFIGYIMPQSSNTSDINIFSNNTSNSLDSVLLDKISGMSGVKHVFGRRSCFDVPAEV
NSKTNTIDMISYDDYDFDCLIKDKQLRKGSDISKVYGNSNYVLTIWDKDRPLKIGDKIQVGNNELEIAGLLKCNPFSDNG
TPNGKITLITSGKTFTRLTGVTDYSLIMIQTTKDATEGNVEAIRNVVGEKYKFSDQRDQQTASTYMAFMLFVYGFLAIIT
LVTVLNIMNSISMSVSARIKQYGAMRAVGMDEHQIIKMIASEAFTYSISGCIVGVVVGLFISKLLYDNLITAHFSYATWS
IPIMPIIIVLLVVAITAIAAVYAPSKRIRNMAVTDTINEL

Sequences:

>Translated_600_residues
MKSYLSLIPISAKVHRRQNHMTFLCIIFAVFLVTAVFSMADMGVKMEKTRLMNKHGSQAVQELGKSVAAQTLYSTAAVLF
VLILIAGVLMISSSINSNVAQRTKFFGMMRCIGMSKQQIIRFVKLEALNWCKTAVPIGIILGIVVTWGLCAGLRFLVGGE
FSDIPLWGVSPAGIIIGIIVGVVTVLIAARSPAKRAAKVSPVTAVSGNSENTKNATHAVNASFSKIETALGIHHAVSGKK
NLILMTSSFALSIILFLSFSVLIEFIGYIMPQSSNTSDINIFSNNTSNSLDSVLLDKISGMSGVKHVFGRRSCFDVPAEV
NSKTNTIDMISYDDYDFDCLIKDKQLRKGSDISKVYGNSNYVLTIWDKDRPLKIGDKIQVGNNELEIAGLLKCNPFSDNG
TPNGKITLITSGKTFTRLTGVTDYSLIMIQTTKDATEGNVEAIRNVVGEKYKFSDQRDQQTASTYMAFMLFVYGFLAIIT
LVTVLNIMNSISMSVSARIKQYGAMRAVGMDEHQIIKMIASEAFTYSISGCIVGVVVGLFISKLLYDNLITAHFSYATWS
IPIMPIIIVLLVVAITAIAAVYAPSKRIRNMAVTDTINEL
>Mature_600_residues
MKSYLSLIPISAKVHRRQNHMTFLCIIFAVFLVTAVFSMADMGVKMEKTRLMNKHGSQAVQELGKSVAAQTLYSTAAVLF
VLILIAGVLMISSSINSNVAQRTKFFGMMRCIGMSKQQIIRFVKLEALNWCKTAVPIGIILGIVVTWGLCAGLRFLVGGE
FSDIPLWGVSPAGIIIGIIVGVVTVLIAARSPAKRAAKVSPVTAVSGNSENTKNATHAVNASFSKIETALGIHHAVSGKK
NLILMTSSFALSIILFLSFSVLIEFIGYIMPQSSNTSDINIFSNNTSNSLDSVLLDKISGMSGVKHVFGRRSCFDVPAEV
NSKTNTIDMISYDDYDFDCLIKDKQLRKGSDISKVYGNSNYVLTIWDKDRPLKIGDKIQVGNNELEIAGLLKCNPFSDNG
TPNGKITLITSGKTFTRLTGVTDYSLIMIQTTKDATEGNVEAIRNVVGEKYKFSDQRDQQTASTYMAFMLFVYGFLAIIT
LVTVLNIMNSISMSVSARIKQYGAMRAVGMDEHQIIKMIASEAFTYSISGCIVGVVVGLFISKLLYDNLITAHFSYATWS
IPIMPIIIVLLVVAITAIAAVYAPSKRIRNMAVTDTINEL

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65426; Mature: 65426

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSYLSLIPISAKVHRRQNHMTFLCIIFAVFLVTAVFSMADMGVKMEKTRLMNKHGSQAV
CCCCHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHH
QELGKSVAAQTLYSTAAVLFVLILIAGVLMISSSINSNVAQRTKFFGMMRCIGMSKQQII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHH
RFVKLEALNWCKTAVPIGIILGIVVTWGLCAGLRFLVGGEFSDIPLWGVSPAGIIIGIIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
GVVTVLIAARSPAKRAAKVSPVTAVSGNSENTKNATHAVNASFSKIETALGIHHAVSGKK
HHHHHHHHCCCCHHHHCCCCCEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCC
NLILMTSSFALSIILFLSFSVLIEFIGYIMPQSSNTSDINIFSNNTSNSLDSVLLDKISG
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHCC
MSGVKHVFGRRSCFDVPAEVNSKTNTIDMISYDDYDFDCLIKDKQLRKGSDISKVYGNSN
CHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCHHCCCCCHHHHHCCCC
YVLTIWDKDRPLKIGDKIQVGNNELEIAGLLKCNPFSDNGTPNGKITLITSGKTFTRLTG
EEEEEECCCCCCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEC
VTDYSLIMIQTTKDATEGNVEAIRNVVGEKYKFSDQRDQQTASTYMAFMLFVYGFLAIIT
CCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVTVLNIMNSISMSVSARIKQYGAMRAVGMDEHQIIKMIASEAFTYSISGCIVGVVVGLF
HHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHH
ISKLLYDNLITAHFSYATWSIPIMPIIIVLLVVAITAIAAVYAPSKRIRNMAVTDTINEL
HHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSYLSLIPISAKVHRRQNHMTFLCIIFAVFLVTAVFSMADMGVKMEKTRLMNKHGSQAV
CCCCHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHH
QELGKSVAAQTLYSTAAVLFVLILIAGVLMISSSINSNVAQRTKFFGMMRCIGMSKQQII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHH
RFVKLEALNWCKTAVPIGIILGIVVTWGLCAGLRFLVGGEFSDIPLWGVSPAGIIIGIIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
GVVTVLIAARSPAKRAAKVSPVTAVSGNSENTKNATHAVNASFSKIETALGIHHAVSGKK
HHHHHHHHCCCCHHHHCCCCCEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCC
NLILMTSSFALSIILFLSFSVLIEFIGYIMPQSSNTSDINIFSNNTSNSLDSVLLDKISG
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHCC
MSGVKHVFGRRSCFDVPAEVNSKTNTIDMISYDDYDFDCLIKDKQLRKGSDISKVYGNSN
CHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCHHCCCCCHHHHHCCCC
YVLTIWDKDRPLKIGDKIQVGNNELEIAGLLKCNPFSDNGTPNGKITLITSGKTFTRLTG
EEEEEECCCCCCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEC
VTDYSLIMIQTTKDATEGNVEAIRNVVGEKYKFSDQRDQQTASTYMAFMLFVYGFLAIIT
CCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVTVLNIMNSISMSVSARIKQYGAMRAVGMDEHQIIKMIASEAFTYSISGCIVGVVVGLF
HHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHH
ISKLLYDNLITAHFSYATWSIPIMPIIIVLLVVAITAIAAVYAPSKRIRNMAVTDTINEL
HHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA