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The map label for this gene is nifE [H]

Identifier: 226947951

GI number: 226947951

Start: 871667

End: 872905

Strand: Direct

Name: nifE [H]

Synonym: CLM_0809

Alternate gene names: 226947951

Gene position: 871667-872905 (Clockwise)

Preceding gene: 226947950

Following gene: 226947952

Centisome position: 20.98

GC content: 36.16

Gene sequence:

>1239_bases
TTGGGAATTCATAAGTTCAAACCACCAATGTCAGGTAGAATGGGAGTATTATGGACTCTTGCTTCAATTCGTGATGCAGC
TTTAATTGAATACGGATGCATGGGACATATGCAGTATGGGAGAATGTTTTTAAATCAAGCTGGTATATCCAGAGGGTGCA
AACTATATTCTACTCACATTGACGAAACAGACATTTCATTAGGAGATACTAGAAGACTCAATCGTACTATTGCTCAAATT
GTAGAAAGAGATAAGCCTAAAATTATTTTTTTACTGCCATCCTCAGTGCCAACAGTTATTGGAACAGACTTAGTGGCTAT
ATGTGAAGAGCTACAACCGGAATACCCTAATACTTTTTTACTTACATTTGGATGTGGAGGCTTTGATATAGATGGGCATC
GTGGTGTTGAGGAAGCACTTTTGCTTCTTTCAAAAATGTTACCAAAGGATGTAGAAAAAACAGAAGAACCTACATTTAAT
ATAATTGGTTCTTGTGCTGATTTATTTCGATTTAATGCTGATGCAGAAGAGATTATCCGCATAATGAAGGGTGCCTTTGG
TATGAAGAAACTTTGCGTTATGACCTCTGATACATCTGTAGAACAAATTGAGAATATGGGTGGTGCCCACATTAATTTAG
TGATACGACAGGAAGGAGAGCACGCTGCAAAACAATTGAAGAAGCAATTTGGAACCCCATATTTATTTGCTAGGCCCTAT
GGAATTGAGGGAACTTTAGAATGGACAGATAAGATAGCTAAGATCTCTGGGTTAACTTTAGATAATAGTTTTATAAAATC
AGAAAAAGAAAAAAGCATGATTCAAATTTCACCTGCAATTTCTGCCTTTCAACATGTAATACGAGAACATCCTGATGAAG
CAAGAATTTCATTAGGAGGTCATAGAGATGTGGTAAAAGGTATTCTTTCTTATGCAGAAGAAGAATTATCCTTAATTAGA
GGAAACTGTTGGTGCGACTCAGAAGCTATGGCAAGTGAAGAAATTCCCTATTTTTCCGAAGATCAATGGGTACAGGCCAT
AGAATCTGAGGAAAATGGACTTCTAATGGCAAGTGGAGAAGCTTTGAAATGGGCAAAAAGAAATATAGATCTTCAAATAT
CTAACCCAGATATAAAATGGAGATTAAATCATTATGAATCTCCCTTTATTGGCTTTCGTGGGGCCATAAATTTAGTTAAC
TTATGGCTCAACGGTCTTTTAGAACAATTAAATGATTAA

Upstream 100 bases:

>100_bases
ACCGCAGTTTTATTAAGTAGAATGTTAAAGGTTTATAGTAAAATAAATGTTGAAAAAATAAGGAGGTAAAGTAAATGTTA
AAAAATAAGGAGGTAAAGTT

Downstream 100 bases:

>100_bases
ATATATAGTGTAGATGTTAGAATCAAATTGATTCTTCATCTGCACTTTTTTATTGTCATAATTAATTCATTATGGCTAAA
ATGATTACAAATATTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MGIHKFKPPMSGRMGVLWTLASIRDAALIEYGCMGHMQYGRMFLNQAGISRGCKLYSTHIDETDISLGDTRRLNRTIAQI
VERDKPKIIFLLPSSVPTVIGTDLVAICEELQPEYPNTFLLTFGCGGFDIDGHRGVEEALLLLSKMLPKDVEKTEEPTFN
IIGSCADLFRFNADAEEIIRIMKGAFGMKKLCVMTSDTSVEQIENMGGAHINLVIRQEGEHAAKQLKKQFGTPYLFARPY
GIEGTLEWTDKIAKISGLTLDNSFIKSEKEKSMIQISPAISAFQHVIREHPDEARISLGGHRDVVKGILSYAEEELSLIR
GNCWCDSEAMASEEIPYFSEDQWVQAIESEENGLLMASGEALKWAKRNIDLQISNPDIKWRLNHYESPFIGFRGAINLVN
LWLNGLLEQLND

Sequences:

>Translated_412_residues
MGIHKFKPPMSGRMGVLWTLASIRDAALIEYGCMGHMQYGRMFLNQAGISRGCKLYSTHIDETDISLGDTRRLNRTIAQI
VERDKPKIIFLLPSSVPTVIGTDLVAICEELQPEYPNTFLLTFGCGGFDIDGHRGVEEALLLLSKMLPKDVEKTEEPTFN
IIGSCADLFRFNADAEEIIRIMKGAFGMKKLCVMTSDTSVEQIENMGGAHINLVIRQEGEHAAKQLKKQFGTPYLFARPY
GIEGTLEWTDKIAKISGLTLDNSFIKSEKEKSMIQISPAISAFQHVIREHPDEARISLGGHRDVVKGILSYAEEELSLIR
GNCWCDSEAMASEEIPYFSEDQWVQAIESEENGLLMASGEALKWAKRNIDLQISNPDIKWRLNHYESPFIGFRGAINLVN
LWLNGLLEQLND
>Mature_411_residues
GIHKFKPPMSGRMGVLWTLASIRDAALIEYGCMGHMQYGRMFLNQAGISRGCKLYSTHIDETDISLGDTRRLNRTIAQIV
ERDKPKIIFLLPSSVPTVIGTDLVAICEELQPEYPNTFLLTFGCGGFDIDGHRGVEEALLLLSKMLPKDVEKTEEPTFNI
IGSCADLFRFNADAEEIIRIMKGAFGMKKLCVMTSDTSVEQIENMGGAHINLVIRQEGEHAAKQLKKQFGTPYLFARPYG
IEGTLEWTDKIAKISGLTLDNSFIKSEKEKSMIQISPAISAFQHVIREHPDEARISLGGHRDVVKGILSYAEEELSLIRG
NCWCDSEAMASEEIPYFSEDQWVQAIESEENGLLMASGEALKWAKRNIDLQISNPDIKWRLNHYESPFIGFRGAINLVNL
WLNGLLEQLND

Specific function: This protein may play a role in the biosynthesis of the prosthetic group of nitrogenase (FeMo cofactor) [H]

COG id: COG2710

COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifD/nifK/nifE/nifN family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000510
- InterPro:   IPR000318
- InterPro:   IPR005973 [H]

Pfam domain/function: PF00148 Oxidored_nitro [H]

EC number: NA

Molecular weight: Translated: 46219; Mature: 46087

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIHKFKPPMSGRMGVLWTLASIRDAALIEYGCMGHMQYGRMFLNQAGISRGCKLYSTHI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECC
DETDISLGDTRRLNRTIAQIVERDKPKIIFLLPSSVPTVIGTDLVAICEELQPEYPNTFL
CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEE
LTFGCGGFDIDGHRGVEEALLLLSKMLPKDVEKTEEPTFNIIGSCADLFRFNADAEEIIR
EEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHH
IMKGAFGMKKLCVMTSDTSVEQIENMGGAHINLVIRQEGEHAAKQLKKQFGTPYLFARPY
HHHCCCCCHHEEEEECCCCHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCEEEECCC
GIEGTLEWTDKIAKISGLTLDNSFIKSEKEKSMIQISPAISAFQHVIREHPDEARISLGG
CCCCCHHHHHHHHHHCCCEECHHHHHHHHHCCEEEEHHHHHHHHHHHHCCCCHHEEECCC
HRDVVKGILSYAEEELSLIRGNCWCDSEAMASEEIPYFSEDQWVQAIESEENGLLMASGE
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCEEEECCC
ALKWAKRNIDLQISNPDIKWRLNHYESPFIGFRGAINLVNLWLNGLLEQLND
HHHHHHCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GIHKFKPPMSGRMGVLWTLASIRDAALIEYGCMGHMQYGRMFLNQAGISRGCKLYSTHI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECC
DETDISLGDTRRLNRTIAQIVERDKPKIIFLLPSSVPTVIGTDLVAICEELQPEYPNTFL
CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEE
LTFGCGGFDIDGHRGVEEALLLLSKMLPKDVEKTEEPTFNIIGSCADLFRFNADAEEIIR
EEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHH
IMKGAFGMKKLCVMTSDTSVEQIENMGGAHINLVIRQEGEHAAKQLKKQFGTPYLFARPY
HHHCCCCCHHEEEEECCCCHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCEEEECCC
GIEGTLEWTDKIAKISGLTLDNSFIKSEKEKSMIQISPAISAFQHVIREHPDEARISLGG
CCCCCHHHHHHHHHHCCCEECHHHHHHHHHCCEEEEHHHHHHHHHHHHCCCCHHEEECCC
HRDVVKGILSYAEEELSLIRGNCWCDSEAMASEEIPYFSEDQWVQAIESEENGLLMASGE
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCEEEECCC
ALKWAKRNIDLQISNPDIKWRLNHYESPFIGFRGAINLVNLWLNGLLEQLND
HHHHHHCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2726466 [H]