Click here to switch to the map view.

The map label for this gene is 226947950

Identifier: 226947950

GI number: 226947950

Start: 870358

End: 871635

Strand: Direct

Name: 226947950

Synonym: CLM_0808

Alternate gene names: NA

Gene position: 870358-871635 (Clockwise)

Preceding gene: 226947949

Following gene: 226947951

Centisome position: 20.95

GC content: 33.41

Gene sequence:

>1278_bases
ATGGAGGAATTAAAACATCTAAAACACTTATCTTCAGTTAAAACAAATGCCGGGGTAAAATTTTTGACTCCCGCAGCTTT
CCCAGGAAATCATTGTCCTATGCATACTGCATTAGCACTTAGTTCACGGGTTAAGGGAATGTCTACATTGGTTGTAGGAA
CACCAGAATGTGGAACCTATAGTCGTAATATTGTTTCGGGTATCAAAAGTGAGGAAGGTGAGCTGCATTGGACCTATATT
TTAGATTCAAATGAGGTTGTATTTGGATGTAGCAGAGGATTGATTAGGACTATAAAAGAAATGGATAAGTCTGGTGCCAA
GGCTATTATGATAATTTTAACTTGTGTTCCTGAGATAATTGGGGAAGATATAGAGGGCATTGTACATGAAATGCAGCCTG
AAGTTTCAGCACAACTTACATTTGTATTAATGGCACATTTTAAATGTAATAGTTATCCTTCAGGTTATTGGAAGACTTTA
GTAGCATTCGGGAACTTGATGAAGAAAGGGAAAAAAAGCACTGATACAATCAATATTCTTGGTCGTAGTCCAATAGAAAA
ACATGTTCCTATGCCAGGATTATTAACAGCATTAGAAAAAAGAGGATTTTACCTTAGAATGCTTGCACCAAAATCTGATA
TTGAGGATTTTATTGTTTCACCAGATGCAGCTCTTAATATTGTGCTTTCACCTTTCATGAATCCTTTGGCTGAAATGATG
TGGGAGAAGTTTAAAGTTCCATTTATAAGTCTTCATGAAATTTATGATGTATTTGAGATTGATAGGCTCTATGAAGCTGT
AGAAAAATCATTGAAAATCAGGTTTAACCATGAATTTGATGAATCAAGGGAAAAGGCTATTGCATTGCAGAAACAGGCAA
AAGATGTATTTAAAGAAAAAAGTTATATTTTAACTCACATTGGTGCTATGATGCCTTTGCCTTTTGTTTTATATCTAACT
AAATTTGAAATGGAGCCTATGCTTTTACATATGGATGAATTTTATCCTGATGATAGAAAATGGGCAAAAGCTATTAAAGA
GCAAGGATATGATCCTATTATATGTCATATGGTAAATGATAATGCTGATATAGAACTTTTAGAAGGTATTAAGGCAGAAT
TTTCTTTAGGAGAACTTTTAAAAGATTCATCTTTAATTCCTTGCGTCCCATATCTAGAGGATTTGTATGGACAAATAGGA
TATGAAAGAACCGCAGTTTTATTAAGTAGAATGTTAAAGGTTTATAGTAAAATAAATGTTGAAAAAATAAGGAGGTAA

Upstream 100 bases:

>100_bases
AAGCTTTAGGAAAAACTGTAGTTGAAGCCTTCCCAGAATGTGATATGGCAAAGCACTACGGTACTTTGGCAAAGATTCTA
TTAGAGGGAGGGAAGTGATA

Downstream 100 bases:

>100_bases
AGTAAATGTTAAAAAATAAGGAGGTAAAGTTTTGGGAATTCATAAGTTCAAACCACCAATGTCAGGTAGAATGGGAGTAT
TATGGACTCTTGCTTCAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MEELKHLKHLSSVKTNAGVKFLTPAAFPGNHCPMHTALALSSRVKGMSTLVVGTPECGTYSRNIVSGIKSEEGELHWTYI
LDSNEVVFGCSRGLIRTIKEMDKSGAKAIMIILTCVPEIIGEDIEGIVHEMQPEVSAQLTFVLMAHFKCNSYPSGYWKTL
VAFGNLMKKGKKSTDTINILGRSPIEKHVPMPGLLTALEKRGFYLRMLAPKSDIEDFIVSPDAALNIVLSPFMNPLAEMM
WEKFKVPFISLHEIYDVFEIDRLYEAVEKSLKIRFNHEFDESREKAIALQKQAKDVFKEKSYILTHIGAMMPLPFVLYLT
KFEMEPMLLHMDEFYPDDRKWAKAIKEQGYDPIICHMVNDNADIELLEGIKAEFSLGELLKDSSLIPCVPYLEDLYGQIG
YERTAVLLSRMLKVYSKINVEKIRR

Sequences:

>Translated_425_residues
MEELKHLKHLSSVKTNAGVKFLTPAAFPGNHCPMHTALALSSRVKGMSTLVVGTPECGTYSRNIVSGIKSEEGELHWTYI
LDSNEVVFGCSRGLIRTIKEMDKSGAKAIMIILTCVPEIIGEDIEGIVHEMQPEVSAQLTFVLMAHFKCNSYPSGYWKTL
VAFGNLMKKGKKSTDTINILGRSPIEKHVPMPGLLTALEKRGFYLRMLAPKSDIEDFIVSPDAALNIVLSPFMNPLAEMM
WEKFKVPFISLHEIYDVFEIDRLYEAVEKSLKIRFNHEFDESREKAIALQKQAKDVFKEKSYILTHIGAMMPLPFVLYLT
KFEMEPMLLHMDEFYPDDRKWAKAIKEQGYDPIICHMVNDNADIELLEGIKAEFSLGELLKDSSLIPCVPYLEDLYGQIG
YERTAVLLSRMLKVYSKINVEKIRR
>Mature_425_residues
MEELKHLKHLSSVKTNAGVKFLTPAAFPGNHCPMHTALALSSRVKGMSTLVVGTPECGTYSRNIVSGIKSEEGELHWTYI
LDSNEVVFGCSRGLIRTIKEMDKSGAKAIMIILTCVPEIIGEDIEGIVHEMQPEVSAQLTFVLMAHFKCNSYPSGYWKTL
VAFGNLMKKGKKSTDTINILGRSPIEKHVPMPGLLTALEKRGFYLRMLAPKSDIEDFIVSPDAALNIVLSPFMNPLAEMM
WEKFKVPFISLHEIYDVFEIDRLYEAVEKSLKIRFNHEFDESREKAIALQKQAKDVFKEKSYILTHIGAMMPLPFVLYLT
KFEMEPMLLHMDEFYPDDRKWAKAIKEQGYDPIICHMVNDNADIELLEGIKAEFSLGELLKDSSLIPCVPYLEDLYGQIG
YERTAVLLSRMLKVYSKINVEKIRR

Specific function: Unknown

COG id: COG2710

COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48266; Mature: 48266

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEELKHLKHLSSVKTNAGVKFLTPAAFPGNHCPMHTALALSSRVKGMSTLVVGTPECGTY
CCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCC
SRNIVSGIKSEEGELHWTYILDSNEVVFGCSRGLIRTIKEMDKSGAKAIMIILTCVPEII
HHHHHHHCCCCCCCEEEEEEECCCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
GEDIEGIVHEMQPEVSAQLTFVLMAHFKCNSYPSGYWKTLVAFGNLMKKGKKSTDTINIL
CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE
GRSPIEKHVPMPGLLTALEKRGFYLRMLAPKSDIEDFIVSPDAALNIVLSPFMNPLAEMM
CCCCHHHCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH
WEKFKVPFISLHEIYDVFEIDRLYEAVEKSLKIRFNHEFDESREKAIALQKQAKDVFKEK
HHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHH
SYILTHIGAMMPLPFVLYLTKFEMEPMLLHMDEFYPDDRKWAKAIKEQGYDPIICHMVND
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECC
NADIELLEGIKAEFSLGELLKDSSLIPCVPYLEDLYGQIGYERTAVLLSRMLKVYSKINV
CCCHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCH
EKIRR
HHHCC
>Mature Secondary Structure
MEELKHLKHLSSVKTNAGVKFLTPAAFPGNHCPMHTALALSSRVKGMSTLVVGTPECGTY
CCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCC
SRNIVSGIKSEEGELHWTYILDSNEVVFGCSRGLIRTIKEMDKSGAKAIMIILTCVPEII
HHHHHHHCCCCCCCEEEEEEECCCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
GEDIEGIVHEMQPEVSAQLTFVLMAHFKCNSYPSGYWKTLVAFGNLMKKGKKSTDTINIL
CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE
GRSPIEKHVPMPGLLTALEKRGFYLRMLAPKSDIEDFIVSPDAALNIVLSPFMNPLAEMM
CCCCHHHCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH
WEKFKVPFISLHEIYDVFEIDRLYEAVEKSLKIRFNHEFDESREKAIALQKQAKDVFKEK
HHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHH
SYILTHIGAMMPLPFVLYLTKFEMEPMLLHMDEFYPDDRKWAKAIKEQGYDPIICHMVND
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECC
NADIELLEGIKAEFSLGELLKDSSLIPCVPYLEDLYGQIGYERTAVLLSRMLKVYSKINV
CCCHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCH
EKIRR
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA