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The map label for this gene is 226947935

Identifier: 226947935

GI number: 226947935

Start: 852716

End: 853903

Strand: Direct

Name: 226947935

Synonym: CLM_0793

Alternate gene names: NA

Gene position: 852716-853903 (Clockwise)

Preceding gene: 226947934

Following gene: 226947936

Centisome position: 20.52

GC content: 26.01

Gene sequence:

>1188_bases
ATGGATATAAAAAAGATTAAATGTTCAGAAATAATTGATGTTAGAGATGGAACGCATGATTCACCTAGATATCAATCGAA
AGGATATCCATTAGTAACCTCAAAAAATATTAAGGGCAATAAAATTGATTTTAATAATGTTAATTTTATTAGTGAGGAAG
ATTATAATAAAATTAATATGAGATCAGCAGTACATAATGGTGATATATTGATGCCTATGATTGGAACAATAGGTAATCCA
GTATTAGTAAATACGAATAAAAAATTTGCTATAAAAAACGTAGCTTTATTTAAACTATCTAATAACAATAAAGTTGATAG
TAAATATTTTTATTATTTATTAACTTCAGATATAGTTAAAAATCAGTTAGAAAATAGAAAAAGAGGAGGAACACAAAATT
TTGTATCATTAAGTAATATTAGAAGCTTAGAGATACCATTAGTACCAATTGAAAAGCAAATATTTATTTCAAATATATTA
GATAAAGCAAAATCTTTAATAGATAAAAGAAAAGCTCAAATAGAAGATTTGGATGAATTAGTCAAATCGAGATTTATCGA
GATGTTTGGAGATACCAAATTAAATCCCTTTAAATGGGAAGTTTATAGATTGGAGGAAATATATTACATTATAGATGGTG
ATAGGGGAAAAAATTATCCTAAACAAGATGAATTTTTTGAAAGAAACTATTGTCTATTTCTAAATGCCGGAAATGTTACA
TCTAAAGGATTTTGTTTTGATAAAAGTTCTTTTATAGCTAAAGAGAAAGATGAAATATTAAGAAAGGGAAAATTACAGAG
AGAAGATTTAGTTGTTACAACAAGAGGAACTGTTGGAAATATTGCGTATTATAATGATAATGTACCATATGATAATATTA
GAATTAATTCAGGTATGGTTATATTAAGAAAGCGTAAGGAAATAAACCCCCTATACTTTATTAGTTATTTTAGTAATAAG
TTAGTTTATCAATCGTTGATTTCTGGTACAGCACAACCGCAAATGCCTATTAGTAATATGAAAAATGCAAATATATATTA
TCCACCAATACAGCTTCAAAACGAATTCGCAGGCTTCGTTAACCAAGTTGATAAATTGAAATTTGAAATGGAGAAGAGTT
TAAAAGAATTAGAAGATAACTTTAATTCACTAATGCAAAAAGCTTTCAAGGGAGAATTATTTAATTAG

Upstream 100 bases:

>100_bases
GATGAACCTAAAGTTATTTTAGAGAGAGTTAAGAAATTGGAAGAAGAGATAACTGAGGGAATAGATGAATTAGAGAAAAT
GATAGAAGTGGGTGAAGAAA

Downstream 100 bases:

>100_bases
AAATACATATATGGAATTACTATTTATTTTCATGACAATTATGTATAATATTATTGAGGAACAAAAACTTTAAGTTTTTA
TCAAAAGGGTGCCTGCACCA

Product: restriction modification system DNA specificity domain-containing protein

Products: NA

Alternate protein names: S.MjaXP; Type I restriction enzyme MjaXP specificity protein; S protein [H]

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MDIKKIKCSEIIDVRDGTHDSPRYQSKGYPLVTSKNIKGNKIDFNNVNFISEEDYNKINMRSAVHNGDILMPMIGTIGNP
VLVNTNKKFAIKNVALFKLSNNNKVDSKYFYYLLTSDIVKNQLENRKRGGTQNFVSLSNIRSLEIPLVPIEKQIFISNIL
DKAKSLIDKRKAQIEDLDELVKSRFIEMFGDTKLNPFKWEVYRLEEIYYIIDGDRGKNYPKQDEFFERNYCLFLNAGNVT
SKGFCFDKSSFIAKEKDEILRKGKLQREDLVVTTRGTVGNIAYYNDNVPYDNIRINSGMVILRKRKEINPLYFISYFSNK
LVYQSLISGTAQPQMPISNMKNANIYYPPIQLQNEFAGFVNQVDKLKFEMEKSLKELEDNFNSLMQKAFKGELFN

Sequences:

>Translated_395_residues
MDIKKIKCSEIIDVRDGTHDSPRYQSKGYPLVTSKNIKGNKIDFNNVNFISEEDYNKINMRSAVHNGDILMPMIGTIGNP
VLVNTNKKFAIKNVALFKLSNNNKVDSKYFYYLLTSDIVKNQLENRKRGGTQNFVSLSNIRSLEIPLVPIEKQIFISNIL
DKAKSLIDKRKAQIEDLDELVKSRFIEMFGDTKLNPFKWEVYRLEEIYYIIDGDRGKNYPKQDEFFERNYCLFLNAGNVT
SKGFCFDKSSFIAKEKDEILRKGKLQREDLVVTTRGTVGNIAYYNDNVPYDNIRINSGMVILRKRKEINPLYFISYFSNK
LVYQSLISGTAQPQMPISNMKNANIYYPPIQLQNEFAGFVNQVDKLKFEMEKSLKELEDNFNSLMQKAFKGELFN
>Mature_395_residues
MDIKKIKCSEIIDVRDGTHDSPRYQSKGYPLVTSKNIKGNKIDFNNVNFISEEDYNKINMRSAVHNGDILMPMIGTIGNP
VLVNTNKKFAIKNVALFKLSNNNKVDSKYFYYLLTSDIVKNQLENRKRGGTQNFVSLSNIRSLEIPLVPIEKQIFISNIL
DKAKSLIDKRKAQIEDLDELVKSRFIEMFGDTKLNPFKWEVYRLEEIYYIIDGDRGKNYPKQDEFFERNYCLFLNAGNVT
SKGFCFDKSSFIAKEKDEILRKGKLQREDLVVTTRGTVGNIAYYNDNVPYDNIRINSGMVILRKRKEINPLYFISYFSNK
LVYQSLISGTAQPQMPISNMKNANIYYPPIQLQNEFAGFVNQVDKLKFEMEKSLKELEDNFNSLMQKAFKGELFN

Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of bipartite DNA recognition sequence. Subunit S dictates DNA sequences specificity [H]

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I restriction system S methylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 45810; Mature: 45810

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKKIKCSEIIDVRDGTHDSPRYQSKGYPLVTSKNIKGNKIDFNNVNFISEEDYNKINM
CCCCCCCHHHEEECCCCCCCCCCCCCCCCCEEECCCCCCCEECCCCCCEECCCCCCEEEH
RSAVHNGDILMPMIGTIGNPVLVNTNKKFAIKNVALFKLSNNNKVDSKYFYYLLTSDIVK
HHHHCCCCEEEEHHHCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCEEEEEEEHHHHHH
NQLENRKRGGTQNFVSLSNIRSLEIPLVPIEKQIFISNILDKAKSLIDKRKAQIEDLDEL
HHHHHHHCCCCCCEEECCCCCEEECEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKSRFIEMFGDTKLNPFKWEVYRLEEIYYIIDGDRGKNYPKQDEFFERNYCLFLNAGNVT
HHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCHHHCCCEEEEEECCCCC
SKGFCFDKSSFIAKEKDEILRKGKLQREDLVVTTRGTVGNIAYYNDNVPYDNIRINSGMV
CCCEEECCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCCCCEEECCCEE
ILRKRKEINPLYFISYFSNKLVYQSLISGTAQPQMPISNMKNANIYYPPIQLQNEFAGFV
EEEECCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCHHCCCCCEEEECCHHHCHHHHHHH
NQVDKLKFEMEKSLKELEDNFNSLMQKAFKGELFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDIKKIKCSEIIDVRDGTHDSPRYQSKGYPLVTSKNIKGNKIDFNNVNFISEEDYNKINM
CCCCCCCHHHEEECCCCCCCCCCCCCCCCCEEECCCCCCCEECCCCCCEECCCCCCEEEH
RSAVHNGDILMPMIGTIGNPVLVNTNKKFAIKNVALFKLSNNNKVDSKYFYYLLTSDIVK
HHHHCCCCEEEEHHHCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCEEEEEEEHHHHHH
NQLENRKRGGTQNFVSLSNIRSLEIPLVPIEKQIFISNILDKAKSLIDKRKAQIEDLDEL
HHHHHHHCCCCCCEEECCCCCEEECEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKSRFIEMFGDTKLNPFKWEVYRLEEIYYIIDGDRGKNYPKQDEFFERNYCLFLNAGNVT
HHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCHHHCCCEEEEEECCCCC
SKGFCFDKSSFIAKEKDEILRKGKLQREDLVVTTRGTVGNIAYYNDNVPYDNIRINSGMV
CCCEEECCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCCCCEEECCCEE
ILRKRKEINPLYFISYFSNKLVYQSLISGTAQPQMPISNMKNANIYYPPIQLQNEFAGFV
EEEECCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCHHCCCCCEEEECCHHHCHHHHHHH
NQVDKLKFEMEKSLKELEDNFNSLMQKAFKGELFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]