Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
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Accession | NC_012563 |
Length | 4,155,278 |
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The map label for this gene is gltS [H]
Identifier: 226947918
GI number: 226947918
Start: 835880
End: 837064
Strand: Direct
Name: gltS [H]
Synonym: CLM_0776
Alternate gene names: 226947918
Gene position: 835880-837064 (Clockwise)
Preceding gene: 226947916
Following gene: 226947920
Centisome position: 20.12
GC content: 32.57
Gene sequence:
>1185_bases ATGACATTAGAGCTTGATATGATTCAAACCACTACCTTAGCTATATTTTTCTATTATATAGGTGTATTTATAAAATCTAA AGTTTCAATTCTTGAAAAATTTTGTATACCTGCTCCAGTTGTAGGTGGACTTATTTTTGCTATTTTAAATTTAATCTTTA CAGAAAGTGGTTTTATATCTATATCTTTAGACACAACTCTTCAAAAGCCTTTTATGTTAGCTTTCTTTACAACTATTGGC CTTGGGGCAAGTTTTAAGATGATAAAACAGGGTGGTCTTCATGTGATAATGTTTTTTATAGCGGCTCTTCTTTTAGTAAT ATCACAAGACTTTCTTGGAGTAGTTATGGCTAAATTTATAGGTGAAGATCCACTTCTTGGATTAATTGTTGGATCCGTAA CCATGACTGGTGGTCATGGAACAGGAGCCACTTTTGGAGCCTTATTCGAATCAGAATACGGCCTTGTAGGCGCTTCCACT ACAGCTATGGCTGCCGCTACCTTTGGGCTTGTATGTGGTAGCTTAATAGGTGGTCCGATAGCTAAAAACCTAATAAGTAA AAATAACCTAAAAAATAACTCAGATGAGTTTTTTGAAACAAATTCTGATGATTGTGAAGAAGTGAGTTATAAAACGCTAT TTAATACATTTTCTCTTATATTTATATCAATGGGACTCGGTTCTATTTTAGAGATGTTTTTTACAAACCTTGGTATAGTC CTTCCTTCATACATAGACGCTATGATAGTGGCAGCTATAATACTTAATATAGGGGAACAAACAAATAAATGGAAAATAAA TTCAAAATGTGCTGATATAATTGGAAGTATGAGCCTTAATGTGTTTTTATCCATGGCACTTATAAGTCTTAAATTATGGG AATTAAAAAGCACAGCAGGTCCATTATTAATTTTATTAATAGGTCAAGCTGTATTAATGTTTATGTTTGCATACTTTATT ACTTTTAGACTAATGGGAAAGGATTATGATGCTGCTGTTATGAGTTCTGGGCATTGTGGATTTGGAATGGGAGCTACTCC TAACGGTATAGCAAACATGGAAGCCATAACTTCTAAATATGGTGCATCACCAAAAGCATTTTTTATTCTTCCAGTTGTCG GGGCATTTTTAATAGACTTTTCTAATTCTTTAGTTATAACATTATTCGTAAATTTATTTAAATAA
Upstream 100 bases:
>100_bases ATATATATTTGAATTTTCATATTTATGAATATTTTTTTTTATTTCTATCATAAGTGATCATATAAACATAATATTGATTA CATTATAAGGGGGATTTTTT
Downstream 100 bases:
>100_bases TCCAATAAAAAATATAGCTAAGTAATATATAAATTAACCTGTTGTGCTAAAAGATAAGTTTTCATTAACAGGATTAATAT ACCATATCACATAGGCACTG
Product: sodium/glutamate symporter
Products: Na (I) [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate permease [H]
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MTLELDMIQTTTLAIFFYYIGVFIKSKVSILEKFCIPAPVVGGLIFAILNLIFTESGFISISLDTTLQKPFMLAFFTTIG LGASFKMIKQGGLHVIMFFIAALLLVISQDFLGVVMAKFIGEDPLLGLIVGSVTMTGGHGTGATFGALFESEYGLVGAST TAMAAATFGLVCGSLIGGPIAKNLISKNNLKNNSDEFFETNSDDCEEVSYKTLFNTFSLIFISMGLGSILEMFFTNLGIV LPSYIDAMIVAAIILNIGEQTNKWKINSKCADIIGSMSLNVFLSMALISLKLWELKSTAGPLLILLIGQAVLMFMFAYFI TFRLMGKDYDAAVMSSGHCGFGMGATPNGIANMEAITSKYGASPKAFFILPVVGAFLIDFSNSLVITLFVNLFK
Sequences:
>Translated_394_residues MTLELDMIQTTTLAIFFYYIGVFIKSKVSILEKFCIPAPVVGGLIFAILNLIFTESGFISISLDTTLQKPFMLAFFTTIG LGASFKMIKQGGLHVIMFFIAALLLVISQDFLGVVMAKFIGEDPLLGLIVGSVTMTGGHGTGATFGALFESEYGLVGAST TAMAAATFGLVCGSLIGGPIAKNLISKNNLKNNSDEFFETNSDDCEEVSYKTLFNTFSLIFISMGLGSILEMFFTNLGIV LPSYIDAMIVAAIILNIGEQTNKWKINSKCADIIGSMSLNVFLSMALISLKLWELKSTAGPLLILLIGQAVLMFMFAYFI TFRLMGKDYDAAVMSSGHCGFGMGATPNGIANMEAITSKYGASPKAFFILPVVGAFLIDFSNSLVITLFVNLFK >Mature_393_residues TLELDMIQTTTLAIFFYYIGVFIKSKVSILEKFCIPAPVVGGLIFAILNLIFTESGFISISLDTTLQKPFMLAFFTTIGL GASFKMIKQGGLHVIMFFIAALLLVISQDFLGVVMAKFIGEDPLLGLIVGSVTMTGGHGTGATFGALFESEYGLVGASTT AMAAATFGLVCGSLIGGPIAKNLISKNNLKNNSDEFFETNSDDCEEVSYKTLFNTFSLIFISMGLGSILEMFFTNLGIVL PSYIDAMIVAAIILNIGEQTNKWKINSKCADIIGSMSLNVFLSMALISLKLWELKSTAGPLLILLIGQAVLMFMFAYFIT FRLMGKDYDAAVMSSGHCGFGMGATPNGIANMEAITSKYGASPKAFFILPVVGAFLIDFSNSLVITLFVNLFK
Specific function: Catalyzes the sodium-dependent uptake of extracellular glutamate [H]
COG id: COG0786
COG function: function code E; Na+/glutamate symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gltS symporter family [H]
Homologues:
Organism=Escherichia coli, GI1790085, Length=372, Percent_Identity=42.4731182795699, Blast_Score=269, Evalue=2e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004445 [H]
Pfam domain/function: PF03616 Glt_symporter [H]
EC number: NA
Molecular weight: Translated: 42399; Mature: 42268
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLELDMIQTTTLAIFFYYIGVFIKSKVSILEKFCIPAPVVGGLIFAILNLIFTESGFIS CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEE ISLDTTLQKPFMLAFFTTIGLGASFKMIKQGGLHVIMFFIAALLLVISQDFLGVVMAKFI EEECCHHCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEDPLLGLIVGSVTMTGGHGTGATFGALFESEYGLVGASTTAMAAATFGLVCGSLIGGPI CCCCHHHHEEHHEEEECCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCHHH AKNLISKNNLKNNSDEFFETNSDDCEEVSYKTLFNTFSLIFISMGLGSILEMFFTNLGIV HHHHHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPSYIDAMIVAAIILNIGEQTNKWKINSKCADIIGSMSLNVFLSMALISLKLWELKSTAG HHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PLLILLIGQAVLMFMFAYFITFRLMGKDYDAAVMSSGHCGFGMGATPNGIANMEAITSKY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH GASPKAFFILPVVGAFLIDFSNSLVITLFVNLFK CCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHC >Mature Secondary Structure TLELDMIQTTTLAIFFYYIGVFIKSKVSILEKFCIPAPVVGGLIFAILNLIFTESGFIS EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEE ISLDTTLQKPFMLAFFTTIGLGASFKMIKQGGLHVIMFFIAALLLVISQDFLGVVMAKFI EEECCHHCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEDPLLGLIVGSVTMTGGHGTGATFGALFESEYGLVGASTTAMAAATFGLVCGSLIGGPI CCCCHHHHEEHHEEEECCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCHHH AKNLISKNNLKNNSDEFFETNSDDCEEVSYKTLFNTFSLIFISMGLGSILEMFFTNLGIV HHHHHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPSYIDAMIVAAIILNIGEQTNKWKINSKCADIIGSMSLNVFLSMALISLKLWELKSTAG HHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PLLILLIGQAVLMFMFAYFITFRLMGKDYDAAVMSSGHCGFGMGATPNGIANMEAITSKY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH GASPKAFFILPVVGAFLIDFSNSLVITLFVNLFK CCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Na (I) [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + L-glutamate [Periplasm] = Na (I) [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]