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The map label for this gene is 226947916

Identifier: 226947916

GI number: 226947916

Start: 833971

End: 834726

Strand: Direct

Name: 226947916

Synonym: CLM_0774

Alternate gene names: NA

Gene position: 833971-834726 (Clockwise)

Preceding gene: 226947915

Following gene: 226947918

Centisome position: 20.07

GC content: 26.59

Gene sequence:

>756_bases
ATGGACAATAAAAAAATCCAGGAACTAAAAGAAGTTTTAAAAAATTTAAATAAAGTTGGAATTAATGATGAAATAAGAAA
AGAAGCTTTAGACCTAGTAAAAGATATTGACGCTATAGATTTATCCATAGCAGAACAACAACTTATAGAAGAAGGAATGG
AGCCACAGGATTTAAGACACTTGTGTGACGTACACATGGAAGTTTTAAAGGATGAATTAAGTAAAATAAAGACAAAGATA
AGCAAGGGCCATGTGGTGTATACTTTAATAGATGAACATGATAAGATTCTAAGATTCTTAGAAGATTTAGAAAAAGTGAA
TTCAGATATTCAAAAGACTAAAAGTTATGATGAAGCTAAAGAAAAAATTTATAGTATTAATAAATTAGCAGAAAATATAT
TAGATGCAGAAAATCATCACCAAAGAGAAGAAAAAATTTTATTTGTAGAGCTGGAAAAAAGAGAAATAACAGGACCTACA
AGAATAATGAGAATGGAACATGATGACTTAAGGGCTAGGAAAAAAGAATTAAAAAGACTTTCTGAAAATGCAGATAAAAT
GGAATTTGATGAATTCAAAAATAAAGTAGATGAAGTTTCAAAATATATAATTTTTAATTTAAGAGATCATATTTTTAAAG
AAAACTATATTTTGTATCCATCATCTTTAGAAGCTATAAAGGGAAAGGATATATGGGATGATATGAAAAAAAGATGTGAT
GAAATAGGATATTGTAGCTTTACATTTGAAAATTAA

Upstream 100 bases:

>100_bases
AAGATTCATAACTTAGAAAAAGATTTATTTATCCATATATACAAAGAAAATAGCGTATTATTTGAGATGCTTTAAAGCTT
ATATAAAGGAGATGATTTAA

Downstream 100 bases:

>100_bases
AAATAGCTTGATATTTATAAATAAAAAAATAAGACCGTCATTATTGACTGTCTTATTTTTTATAATGTATATTTAAGCTT
TTAAATTAGTCTTATTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: Sensory Box Protein; PAS Domain S-Box

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MDNKKIQELKEVLKNLNKVGINDEIRKEALDLVKDIDAIDLSIAEQQLIEEGMEPQDLRHLCDVHMEVLKDELSKIKTKI
SKGHVVYTLIDEHDKILRFLEDLEKVNSDIQKTKSYDEAKEKIYSINKLAENILDAENHHQREEKILFVELEKREITGPT
RIMRMEHDDLRARKKELKRLSENADKMEFDEFKNKVDEVSKYIIFNLRDHIFKENYILYPSSLEAIKGKDIWDDMKKRCD
EIGYCSFTFEN

Sequences:

>Translated_251_residues
MDNKKIQELKEVLKNLNKVGINDEIRKEALDLVKDIDAIDLSIAEQQLIEEGMEPQDLRHLCDVHMEVLKDELSKIKTKI
SKGHVVYTLIDEHDKILRFLEDLEKVNSDIQKTKSYDEAKEKIYSINKLAENILDAENHHQREEKILFVELEKREITGPT
RIMRMEHDDLRARKKELKRLSENADKMEFDEFKNKVDEVSKYIIFNLRDHIFKENYILYPSSLEAIKGKDIWDDMKKRCD
EIGYCSFTFEN
>Mature_251_residues
MDNKKIQELKEVLKNLNKVGINDEIRKEALDLVKDIDAIDLSIAEQQLIEEGMEPQDLRHLCDVHMEVLKDELSKIKTKI
SKGHVVYTLIDEHDKILRFLEDLEKVNSDIQKTKSYDEAKEKIYSINKLAENILDAENHHQREEKILFVELEKREITGPT
RIMRMEHDDLRARKKELKRLSENADKMEFDEFKNKVDEVSKYIIFNLRDHIFKENYILYPSSLEAIKGKDIWDDMKKRCD
EIGYCSFTFEN

Specific function: Unknown

COG id: COG2461

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29800; Mature: 29800

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKKIQELKEVLKNLNKVGINDEIRKEALDLVKDIDAIDLSIAEQQLIEEGMEPQDLRH
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LCDVHMEVLKDELSKIKTKISKGHVVYTLIDEHDKILRFLEDLEKVNSDIQKTKSYDEAK
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKIYSINKLAENILDAENHHQREEKILFVELEKREITGPTRIMRMEHDDLRARKKELKRL
HHHHHHHHHHHHHHCCHHHHHHHHCEEEEEECCHHCCCHHHHHHCCHHHHHHHHHHHHHH
SENADKMEFDEFKNKVDEVSKYIIFNLRDHIFKENYILYPSSLEAIKGKDIWDDMKKRCD
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHCCCCHHHHHHHHHH
EIGYCSFTFEN
HCCCCEEEECC
>Mature Secondary Structure
MDNKKIQELKEVLKNLNKVGINDEIRKEALDLVKDIDAIDLSIAEQQLIEEGMEPQDLRH
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LCDVHMEVLKDELSKIKTKISKGHVVYTLIDEHDKILRFLEDLEKVNSDIQKTKSYDEAK
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKIYSINKLAENILDAENHHQREEKILFVELEKREITGPTRIMRMEHDDLRARKKELKRL
HHHHHHHHHHHHHHCCHHHHHHHHCEEEEEECCHHCCCHHHHHHCCHHHHHHHHHHHHHH
SENADKMEFDEFKNKVDEVSKYIIFNLRDHIFKENYILYPSSLEAIKGKDIWDDMKKRCD
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHCCCCHHHHHHHHHH
EIGYCSFTFEN
HCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA