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The map label for this gene is ytfE [H]

Identifier: 226947915

GI number: 226947915

Start: 833247

End: 833945

Strand: Direct

Name: ytfE [H]

Synonym: CLM_0773

Alternate gene names: 226947915

Gene position: 833247-833945 (Clockwise)

Preceding gene: 226947914

Following gene: 226947916

Centisome position: 20.05

GC content: 26.04

Gene sequence:

>699_bases
ATGAAAAACACTATTAATGTAAATCAAAAGCTTGGGGAAGTTGTTTCTATATTCCCTGGCTCAAGTAGAATATTCAATGA
TGTAAAGATAGATTATTGCTGTGGTGGACACGATACTTTAGGAGAAGCTTTAAAGGAAAAAGGAATAAATTCAGATGAAT
TCATACAAAAACTTAATGAAGAATATGAAAAGTTTGTAGAATCCAATGAAGAGTATATAGATTGGAGAAAAGAAAAACCA
GTAAATCTTATGGAAAATATAGTAGATACTCATCATGATTATACAAAAAGAGAGCTTAAAGAAATAGATGGATTACTATC
AAAAATATTAAAAGTTCATTTTGGGCATCATGGAGAAGAATTATTAAAAGTTCATAGATTATTTGGACTTTTAAAGATAG
AATTAGAAGAACATTTAATAAAGGAAGAAGAAAATCTATTTCCATTAATAAAAGAATATGAAGTGACTAAAGATGAAAAT
GTAAAAAAAGAAATAGATAAATTTATAAAAGAAACAGAAGATGAACATGATAAAGCCGGAGATATATTAAAAGAATTAGA
AAAAATAACAAGAGATTTTAAAGCACCAGAAGGTGCATGTACAAGCTATAGATTAACTTATGATAAGATTCATAACTTAG
AAAAAGATTTATTTATCCATATATACAAAGAAAATAGCGTATTATTTGAGATGCTTTAA

Upstream 100 bases:

>100_bases
CAACTATATTTATAGCAGATTTATTATTAAATTCAATATAAGGATTATATTAAGTAATTATTAGAAATGAATTAGTTACT
TTAATTTAGGAGGAATTGTT

Downstream 100 bases:

>100_bases
AGCTTATATAAAGGAGATGATTTAAATGGACAATAAAAAAATCCAGGAACTAAAAGAAGTTTTAAAAAATTTAAATAAAG
TTGGAATTAATGATGAAATA

Product: putative scdA protein

Products: NA

Alternate protein names: RCMNS [H]

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKNTINVNQKLGEVVSIFPGSSRIFNDVKIDYCCGGHDTLGEALKEKGINSDEFIQKLNEEYEKFVESNEEYIDWRKEKP
VNLMENIVDTHHDYTKRELKEIDGLLSKILKVHFGHHGEELLKVHRLFGLLKIELEEHLIKEEENLFPLIKEYEVTKDEN
VKKEIDKFIKETEDEHDKAGDILKELEKITRDFKAPEGACTSYRLTYDKIHNLEKDLFIHIYKENSVLFEML

Sequences:

>Translated_232_residues
MKNTINVNQKLGEVVSIFPGSSRIFNDVKIDYCCGGHDTLGEALKEKGINSDEFIQKLNEEYEKFVESNEEYIDWRKEKP
VNLMENIVDTHHDYTKRELKEIDGLLSKILKVHFGHHGEELLKVHRLFGLLKIELEEHLIKEEENLFPLIKEYEVTKDEN
VKKEIDKFIKETEDEHDKAGDILKELEKITRDFKAPEGACTSYRLTYDKIHNLEKDLFIHIYKENSVLFEML
>Mature_232_residues
MKNTINVNQKLGEVVSIFPGSSRIFNDVKIDYCCGGHDTLGEALKEKGINSDEFIQKLNEEYEKFVESNEEYIDWRKEKP
VNLMENIVDTHHDYTKRELKEIDGLLSKILKVHFGHHGEELLKVHRLFGLLKIELEEHLIKEEENLFPLIKEYEVTKDEN
VKKEIDKFIKETEDEHDKAGDILKELEKITRDFKAPEGACTSYRLTYDKIHNLEKDLFIHIYKENSVLFEML

Specific function: Involved in anaerobic NO protection [H]

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790654, Length=222, Percent_Identity=31.0810810810811, Blast_Score=111, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 27340; Mature: 27340

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTINVNQKLGEVVSIFPGSSRIFNDVKIDYCCGGHDTLGEALKEKGINSDEFIQKLNE
CCCCCCHHHHHHHHHHHCCCCCHHHHCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHH
EYEKFVESNEEYIDWRKEKPVNLMENIVDTHHDYTKRELKEIDGLLSKILKVHFGHHGEE
HHHHHHHCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LLKVHRLFGLLKIELEEHLIKEEENLFPLIKEYEVTKDENVKKEIDKFIKETEDEHDKAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHH
DILKELEKITRDFKAPEGACTSYRLTYDKIHNLEKDLFIHIYKENSVLFEML
HHHHHHHHHHHHHCCCCCCCCHHEEHHHHHHCCCHHHEEEEECCCCEEEECC
>Mature Secondary Structure
MKNTINVNQKLGEVVSIFPGSSRIFNDVKIDYCCGGHDTLGEALKEKGINSDEFIQKLNE
CCCCCCHHHHHHHHHHHCCCCCHHHHCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHH
EYEKFVESNEEYIDWRKEKPVNLMENIVDTHHDYTKRELKEIDGLLSKILKVHFGHHGEE
HHHHHHHCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LLKVHRLFGLLKIELEEHLIKEEENLFPLIKEYEVTKDENVKKEIDKFIKETEDEHDKAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHH
DILKELEKITRDFKAPEGACTSYRLTYDKIHNLEKDLFIHIYKENSVLFEML
HHHHHHHHHHHHHCCCCCCCCHHEEHHHHHHCCCHHHEEEEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA