Click here to switch to the map view.

The map label for this gene is 226947625

Identifier: 226947625

GI number: 226947625

Start: 501400

End: 502095

Strand: Direct

Name: 226947625

Synonym: CLM_0462

Alternate gene names: NA

Gene position: 501400-502095 (Clockwise)

Preceding gene: 226947624

Following gene: 226947626

Centisome position: 12.07

GC content: 21.84

Gene sequence:

>696_bases
ATGAAAGATATATTTTTAATGGGAGAAAGGTTTCAATATATTTTAAAAACAAAAAAAAGAAAAACTATTTCTGTAAAAAT
TGGAAAAGAATTTATTATAGAAGTTACAGCACCTTTAGGAACTAATGAATACACAATAGAACAGGTCCTTAAAAAAGAAG
AAAAATGGATTATTAAAAAGATAAAAAAGCTTAAAGAAGTAGAAAATTTCAATGGATATTATTATTTAGGTGAATTGTAT
TATTTAAAAATTAAAGAGGTAAAGTCTTTATATTTTAAATTAGAACTAGATAGTAATAAATTTATGGTTTATATAAATTC
TGGTATTTTAAAAGAAAAAAGAGAAGTGATAATAAAAGATAATCTAGAAAAATTTTATAAAGAGCAGGCTGTAAAAGTAT
TAAAGGAAAGAACAGATTATTATTCTAGTATATTAAAAGTTGTACCTAAAAATATAGTAATAAAAAATCAAAAAACTTTA
TGGGGAAGTTGTTCTTCTAAAGGAAATATAAATTACAACTATAAAATAGTTATGGCTCCTTTAAAAATTTTAGATTACAT
AGTTGTTCATGAACTTTGTCATTTAGTACATATGAATCATTCTAAGGATTTTTGGCACTTAGTTGAAAGTATAATTCCTG
ATTTTAAAGAAAGAAGAAATTGGCTTAAAGAAAATGGGTATAAACTAAAAATTTAA

Upstream 100 bases:

>100_bases
GGAAAATAGAATATAATATTTAACATAGACAAAAAGGTGTCTCAAAATTAAATCTATTTTTAGACACTTTTTTTTATTTA
AGATAAAAGAAGGATATAAA

Downstream 100 bases:

>100_bases
TAGCTTTAATAGTTGTTTTTGATTATTATCTCTAACAATGGATATAAATATAAATAGTAAAAAATAGTTGTTGTGGAGGT
AGTAGTATGAATAGAGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Metal-Dependent Hydrolase; Zinc Metallopeptidase; Zinc-Dependent Protease; Zinc Protease; Zinc Metallopeptidases-Like Protein; Conserved Metal-Dependent Hydrolase; Metal-Dependent Hydrolase Family Protein; Zinc Metallopeptidase-Like Protein; Zinc Metallopeptidase Protein; Protease; Zinc Metallo Protease

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MKDIFLMGERFQYILKTKKRKTISVKIGKEFIIEVTAPLGTNEYTIEQVLKKEEKWIIKKIKKLKEVENFNGYYYLGELY
YLKIKEVKSLYFKLELDSNKFMVYINSGILKEKREVIIKDNLEKFYKEQAVKVLKERTDYYSSILKVVPKNIVIKNQKTL
WGSCSSKGNINYNYKIVMAPLKILDYIVVHELCHLVHMNHSKDFWHLVESIIPDFKERRNWLKENGYKLKI

Sequences:

>Translated_231_residues
MKDIFLMGERFQYILKTKKRKTISVKIGKEFIIEVTAPLGTNEYTIEQVLKKEEKWIIKKIKKLKEVENFNGYYYLGELY
YLKIKEVKSLYFKLELDSNKFMVYINSGILKEKREVIIKDNLEKFYKEQAVKVLKERTDYYSSILKVVPKNIVIKNQKTL
WGSCSSKGNINYNYKIVMAPLKILDYIVVHELCHLVHMNHSKDFWHLVESIIPDFKERRNWLKENGYKLKI
>Mature_231_residues
MKDIFLMGERFQYILKTKKRKTISVKIGKEFIIEVTAPLGTNEYTIEQVLKKEEKWIIKKIKKLKEVENFNGYYYLGELY
YLKIKEVKSLYFKLELDSNKFMVYINSGILKEKREVIIKDNLEKFYKEQAVKVLKERTDYYSSILKVVPKNIVIKNQKTL
WGSCSSKGNINYNYKIVMAPLKILDYIVVHELCHLVHMNHSKDFWHLVESIIPDFKERRNWLKENGYKLKI

Specific function: Unknown

COG id: COG1451

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27707; Mature: 27707

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDIFLMGERFQYILKTKKRKTISVKIGKEFIIEVTAPLGTNEYTIEQVLKKEEKWIIKK
CCCEEEEHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
IKKLKEVENFNGYYYLGELYYLKIKEVKSLYFKLELDSNKFMVYINSGILKEKREVIIKD
HHHHHHHHCCCCEEEEEEEEEEEHHHHHEEEEEEEECCCEEEEEECCCCHHHHHHHHHHH
NLEKFYKEQAVKVLKERTDYYSSILKVVPKNIVIKNQKTLWGSCSSKGNINYNYKIVMAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCCCCCCEEEEEEEHH
LKILDYIVVHELCHLVHMNHSKDFWHLVESIIPDFKERRNWLKENGYKLKI
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHCCEEECC
>Mature Secondary Structure
MKDIFLMGERFQYILKTKKRKTISVKIGKEFIIEVTAPLGTNEYTIEQVLKKEEKWIIKK
CCCEEEEHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
IKKLKEVENFNGYYYLGELYYLKIKEVKSLYFKLELDSNKFMVYINSGILKEKREVIIKD
HHHHHHHHCCCCEEEEEEEEEEEHHHHHEEEEEEEECCCEEEEEECCCCHHHHHHHHHHH
NLEKFYKEQAVKVLKERTDYYSSILKVVPKNIVIKNQKTLWGSCSSKGNINYNYKIVMAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCCCCCCEEEEEEEHH
LKILDYIVVHELCHLVHMNHSKDFWHLVESIIPDFKERRNWLKENGYKLKI
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA