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The map label for this gene is ssb [H]

Identifier: 226947626

GI number: 226947626

Start: 502182

End: 502520

Strand: Direct

Name: ssb [H]

Synonym: CLM_0463

Alternate gene names: 226947626

Gene position: 502182-502520 (Clockwise)

Preceding gene: 226947625

Following gene: 226947627

Centisome position: 12.09

GC content: 28.32

Gene sequence:

>339_bases
ATGAATAGAGTTATGCTCATAGGCAGATTAACTAAAGACGCAGAACTTAAGCATATAGAGGATAGAGATGTTTCTTTATT
AAGATTTGTAATAGCTGTAAATAGATATTACAACAAAGAAAATTCCAAAACTGATTATATACCTATTGTTGTTTGGGGAA
GACATGCTGAAGCTATACATAAGTATATGAAGAAAGGTAAATTAATTAGTGTTGTGGGAAGAATACAGGCTAGAAATTAT
GAAGATAAAAATGGCAATAAAAAGTATGGAATAGAAATAGTCTCTAATGAAATAAAATTCTTGGACCCTAAAAAAATAGA
TAAAGTTGTTAGTAACTAA

Upstream 100 bases:

>100_bases
AACTAAAAATTTAATAGCTTTAATAGTTGTTTTTGATTATTATCTCTAACAATGGATATAAATATAAATAGTAAAAAATA
GTTGTTGTGGAGGTAGTAGT

Downstream 100 bases:

>100_bases
ATATTTAGTTTTGAAAAATAAAAAATTAAGTTTTAATAAAAATTTATCCGTATCCCTCTATAAATATTTTAAATAATATA
TTTATAAATTTTCTTAAGAA

Product: single-strand binding domain-containing protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MNRVMLIGRLTKDAELKHIEDRDVSLLRFVIAVNRYYNKENSKTDYIPIVVWGRHAEAIHKYMKKGKLISVVGRIQARNY
EDKNGNKKYGIEIVSNEIKFLDPKKIDKVVSN

Sequences:

>Translated_112_residues
MNRVMLIGRLTKDAELKHIEDRDVSLLRFVIAVNRYYNKENSKTDYIPIVVWGRHAEAIHKYMKKGKLISVVGRIQARNY
EDKNGNKKYGIEIVSNEIKFLDPKKIDKVVSN
>Mature_112_residues
MNRVMLIGRLTKDAELKHIEDRDVSLLRFVIAVNRYYNKENSKTDYIPIVVWGRHAEAIHKYMKKGKLISVVGRIQARNY
EDKNGNKKYGIEIVSNEIKFLDPKKIDKVVSN

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 13089; Mature: 13089

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRVMLIGRLTKDAELKHIEDRDVSLLRFVIAVNRYYNKENSKTDYIPIVVWGRHAEAIH
CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHH
KYMKKGKLISVVGRIQARNYEDKNGNKKYGIEIVSNEIKFLDPKKIDKVVSN
HHHHCCCEEEEEHHHHCCCCCCCCCCEEEEEEEECCCCEECCHHHHHHHHCC
>Mature Secondary Structure
MNRVMLIGRLTKDAELKHIEDRDVSLLRFVIAVNRYYNKENSKTDYIPIVVWGRHAEAIH
CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHH
KYMKKGKLISVVGRIQARNYEDKNGNKKYGIEIVSNEIKFLDPKKIDKVVSN
HHHHCCCEEEEEHHHHCCCCCCCCCCEEEEEEEECCCCEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12552129 [H]