Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
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Accession | NC_012563 |
Length | 4,155,278 |
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The map label for this gene is 226947616
Identifier: 226947616
GI number: 226947616
Start: 491764
End: 493275
Strand: Direct
Name: 226947616
Synonym: CLM_0453
Alternate gene names: NA
Gene position: 491764-493275 (Clockwise)
Preceding gene: 226947614
Following gene: 226947617
Centisome position: 11.83
GC content: 26.32
Gene sequence:
>1512_bases ATGAAAAAAACAAGACGAATTTTATATTTAATTATACTTATATTTTCTTTAAATATTAGTAATGCTTTAGCAGCGGACAA TATAAAAAAATATCCGGCACCAGATGTAGAAAAGCGTTCCTATTCTACAACGGTAAAATATAATCAAAATATTTATGATG CTATATTAAAAGGACTTACAAATTTACAGGATAAAGTAGATACGTCTGCTTACTCCAAGAATGCAGATGAAGTTTTTAAT GTCTTAGAAAAAGTTTTGGATGATCATCCAGAAATATTTTATTTTGATTATGAAAACTGTTCCTTTTGGAGCAATGGAAT ATTAGAATTAGGATATAGAGGGAATAAAGAAACAATAAATACTATGAGACAACAATTGGATACTAAGGTACAATCCATAA TAAATAATGTAATAACTAAAGATATGTCTGAACTTGAAAAGGAAATGGCTATTCATGATTATATAGTTTTAAATACTAAA TATGATGAAGAGGCTTTAAATGGAAATATTAGTTCAGAGTTAATTTTTACTTCTTATGGATGTCTTGTAAATAACTTTGC TGTATGTGATGGATATGCCAAGGCTATGCAACTTCTATTAAATAAAGTAGGGGTTTATACTATAAGGGTAACTGGAGATG GTAATGGTGTTAGCCATGCTTGGAATATAGTAAGAATAAATGGTAAAAACTATCAAGTAGATGCTACTTGGAATGATCCA GTGCCAGATAGTGGTTATGTTCGTTATAAATATTTTAATATGTCAGATGCAGATATTGCAAAGGATCATCACTGGGTAAA ATCTGATTTCCCTGCTTGTAATGATAATTCTTTTAAATATTTACACAAAGCAGATTATGTAGTTAAAGATTTAGATTATA TTTATTATAGTAATAATGAAGATGATTATAATCTTTATAAAATGAAGATAGATGGAAGTAATAATCAAATGCTTACAGAG GATAGAGCTGTAAATTTAGTATACTACAATGATTATATATATTTTAGTAATTATTCAGATGGAGGAACTTTATATAAAGT AAAGAATGATGGTACAGAATTAGAACAAATTTTGGACAATCATGTAGAAAATTTACATTATTTAAATGGGTACTTAACTT ATTATAATGAGGATCTTTCTAAAGATGAAAAAATGAAATTAGAACAAATAGCCTATGAAGTAGAAAATAAAGAAAAGTTT AATGAAATTTTTTCTTCCTATAAAGATTGGGGACAAGCCAAAGAAGTTCCACGTAATAAAATTTGGAAGATTAGTTTTAA TAGGTCTATAAATTCAGAGAATTTGAAAGATCAAGTTTATGTAATGGATAGTTCTTTTAATAAAGTAACAGATATAGATG TAAATATTAATGAAGGTAAAAATATAATAATAACTAAAAAAGCTTCATATAAAAGAGGTGGATTATATTATTTAGTTATA AGTAAACCTATTAAGGATATTAAAGGAAAGGAAATAAAAGAGCCGGTTGTAATGAGATTTAAAGTATATTAA
Upstream 100 bases:
>100_bases AAATAAAATATATTTTATTTAAATCTAATAAAAATTAAATAAAAGATTAATGTATAAAATCTAAAATTTAGGTTTTATAT ATTTAAGTGAGGGTAGATTT
Downstream 100 bases:
>100_bases ATTTAAAACATTAATATTTGAATAAAATAATATAGATATAGAATTTATAGTTTATAAGACTATTTATTCTATATCTTTTT TATTTAATATTTATATTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase/Protease; S-Layer Protein; Transglutaminase Domain Protein; Transglutaminase-Like Superfamily Protein; S-Layer Domain-Containing Protein; Ig Domain-Containing Domain-Containing Protein; Protease; Lipoprotein; S-Layer Domain Protein; S-Layer-Like Domain-Containing Protein; Transglutaminase-Like Protease; Bacterial Ig-Like Domain; Copper Amine Oxidase Domain Protein; Murein Endopeptidase; Protein Involved In Cytokinesis Contains TGc Domain; Ig Domain-Containing Protein
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MKKTRRILYLIILIFSLNISNALAADNIKKYPAPDVEKRSYSTTVKYNQNIYDAILKGLTNLQDKVDTSAYSKNADEVFN VLEKVLDDHPEIFYFDYENCSFWSNGILELGYRGNKETINTMRQQLDTKVQSIINNVITKDMSELEKEMAIHDYIVLNTK YDEEALNGNISSELIFTSYGCLVNNFAVCDGYAKAMQLLLNKVGVYTIRVTGDGNGVSHAWNIVRINGKNYQVDATWNDP VPDSGYVRYKYFNMSDADIAKDHHWVKSDFPACNDNSFKYLHKADYVVKDLDYIYYSNNEDDYNLYKMKIDGSNNQMLTE DRAVNLVYYNDYIYFSNYSDGGTLYKVKNDGTELEQILDNHVENLHYLNGYLTYYNEDLSKDEKMKLEQIAYEVENKEKF NEIFSSYKDWGQAKEVPRNKIWKISFNRSINSENLKDQVYVMDSSFNKVTDIDVNINEGKNIIITKKASYKRGGLYYLVI SKPIKDIKGKEIKEPVVMRFKVY
Sequences:
>Translated_503_residues MKKTRRILYLIILIFSLNISNALAADNIKKYPAPDVEKRSYSTTVKYNQNIYDAILKGLTNLQDKVDTSAYSKNADEVFN VLEKVLDDHPEIFYFDYENCSFWSNGILELGYRGNKETINTMRQQLDTKVQSIINNVITKDMSELEKEMAIHDYIVLNTK YDEEALNGNISSELIFTSYGCLVNNFAVCDGYAKAMQLLLNKVGVYTIRVTGDGNGVSHAWNIVRINGKNYQVDATWNDP VPDSGYVRYKYFNMSDADIAKDHHWVKSDFPACNDNSFKYLHKADYVVKDLDYIYYSNNEDDYNLYKMKIDGSNNQMLTE DRAVNLVYYNDYIYFSNYSDGGTLYKVKNDGTELEQILDNHVENLHYLNGYLTYYNEDLSKDEKMKLEQIAYEVENKEKF NEIFSSYKDWGQAKEVPRNKIWKISFNRSINSENLKDQVYVMDSSFNKVTDIDVNINEGKNIIITKKASYKRGGLYYLVI SKPIKDIKGKEIKEPVVMRFKVY >Mature_503_residues MKKTRRILYLIILIFSLNISNALAADNIKKYPAPDVEKRSYSTTVKYNQNIYDAILKGLTNLQDKVDTSAYSKNADEVFN VLEKVLDDHPEIFYFDYENCSFWSNGILELGYRGNKETINTMRQQLDTKVQSIINNVITKDMSELEKEMAIHDYIVLNTK YDEEALNGNISSELIFTSYGCLVNNFAVCDGYAKAMQLLLNKVGVYTIRVTGDGNGVSHAWNIVRINGKNYQVDATWNDP VPDSGYVRYKYFNMSDADIAKDHHWVKSDFPACNDNSFKYLHKADYVVKDLDYIYYSNNEDDYNLYKMKIDGSNNQMLTE DRAVNLVYYNDYIYFSNYSDGGTLYKVKNDGTELEQILDNHVENLHYLNGYLTYYNEDLSKDEKMKLEQIAYEVENKEKF NEIFSSYKDWGQAKEVPRNKIWKISFNRSINSENLKDQVYVMDSSFNKVTDIDVNINEGKNIIITKKASYKRGGLYYLVI SKPIKDIKGKEIKEPVVMRFKVY
Specific function: Unknown
COG id: COG5279
COG function: function code D; Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58512; Mature: 58512
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTRRILYLIILIFSLNISNALAADNIKKYPAPDVEKRSYSTTVKYNQNIYDAILKGLT CCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHH NLQDKVDTSAYSKNADEVFNVLEKVLDDHPEIFYFDYENCSFWSNGILELGYRGNKETIN HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHHH TMRQQLDTKVQSIINNVITKDMSELEKEMAIHDYIVLNTKYDEEALNGNISSELIFTSYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHCCCCCCEEEEEEHH CLVNNFAVCDGYAKAMQLLLNKVGVYTIRVTGDGNGVSHAWNIVRINGKNYQVDATWNDP HHHCCCHHCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEEEEEECCCEEEEEEEECCC VPDSGYVRYKYFNMSDADIAKDHHWVKSDFPACNDNSFKYLHKADYVVKDLDYIYYSNNE CCCCCEEEEEEECCCCCHHHCCCCCHHCCCCCCCCCCEEEHHHHCHHEEECEEEEECCCC DDYNLYKMKIDGSNNQMLTEDRAVNLVYYNDYIYFSNYSDGGTLYKVKNDGTELEQILDN CCCEEEEEEEECCCCCEEECCCEEEEEEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHH HVENLHYLNGYLTYYNEDLSKDEKMKLEQIAYEVENKEKFNEIFSSYKDWGQAKEVPRNK HHHHEEHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC IWKISFNRSINSENLKDQVYVMDSSFNKVTDIDVNINEGKNIIITKKASYKRGGLYYLVI EEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEEEECCCCCCCCEEEEEE SKPIKDIKGKEIKEPVVMRFKVY CCCHHHCCCCCCCCCEEEEEEEC >Mature Secondary Structure MKKTRRILYLIILIFSLNISNALAADNIKKYPAPDVEKRSYSTTVKYNQNIYDAILKGLT CCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHH NLQDKVDTSAYSKNADEVFNVLEKVLDDHPEIFYFDYENCSFWSNGILELGYRGNKETIN HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHHH TMRQQLDTKVQSIINNVITKDMSELEKEMAIHDYIVLNTKYDEEALNGNISSELIFTSYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHCCCCCCEEEEEEHH CLVNNFAVCDGYAKAMQLLLNKVGVYTIRVTGDGNGVSHAWNIVRINGKNYQVDATWNDP HHHCCCHHCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEEEEEECCCEEEEEEEECCC VPDSGYVRYKYFNMSDADIAKDHHWVKSDFPACNDNSFKYLHKADYVVKDLDYIYYSNNE CCCCCEEEEEEECCCCCHHHCCCCCHHCCCCCCCCCCEEEHHHHCHHEEECEEEEECCCC DDYNLYKMKIDGSNNQMLTEDRAVNLVYYNDYIYFSNYSDGGTLYKVKNDGTELEQILDN CCCEEEEEEEECCCCCEEECCCEEEEEEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHH HVENLHYLNGYLTYYNEDLSKDEKMKLEQIAYEVENKEKFNEIFSSYKDWGQAKEVPRNK HHHHEEHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC IWKISFNRSINSENLKDQVYVMDSSFNKVTDIDVNINEGKNIIITKKASYKRGGLYYLVI EEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEEEECCCCCCCCEEEEEE SKPIKDIKGKEIKEPVVMRFKVY CCCHHHCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA