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The map label for this gene is ynbD [C]

Identifier: 226947595

GI number: 226947595

Start: 458577

End: 459251

Strand: Direct

Name: ynbD [C]

Synonym: CLM_0432

Alternate gene names: 226947595

Gene position: 458577-459251 (Clockwise)

Preceding gene: 226947594

Following gene: 226947596

Centisome position: 11.04

GC content: 22.37

Gene sequence:

>675_bases
TTGATACACAAAATTAAAGAAAATATTGTGCCACTAAGCTTAATGTTAATAATACCAGTAGTAAATGTTTTTTATGCTAT
TTTAAATAACTCAAATAGGGGAGTATACACTTTAGTTACGGATTTGGATAAATCTATGCCTTTTATACCTGCATTTTCTG
TTCCTTATATGGTTTGGTATCCATTTATAATTATATCTTTAATATATATGTGTTTTAAAAATAGAAAATTATATTATAAA
TCTTTATCAAGTATAATAATAAGTTTAATTACAAGTTATATTATATTTTTCTTTTTTCAAACTACAGTACCAAGACCAAA
AGTAATAGGTAATGATATATTTAGTGACATTGTTAAATTTATATATAGTACGGATATTGCTTATAATTGTTTTCCAAGTA
TTCATGTTATAACTACTTATATTATTATGAGGTATATGTTAAATCATGAAATGAAAAATAGTAAAATAATTAATATTACT
GTTATAATATTGGGGATACTTATTATATTATCTACTCAATTTATAAAACAACATGTTTTATTAGACGCAATATTTGCTAT
AATCTTAGGTGAAGGAATTTACAATATGATAAATTATTATGGTTTGGAGATGATTAAGAAATGTCAGCAGAAAAAATCCT
TATTGTTGATGATGAAAAAGAAATCAGAGATTTAA

Upstream 100 bases:

>100_bases
TTAAGAAAGTATTAAGGATTAAGAAAAGCTTTTATTAAGATATTTTAAGTATAATTATTATATAAGATAAAAACAAAAAA
AGGTTATGGGGGAAGTTAAA

Downstream 100 bases:

>100_bases
TAGATATATACTTAACCAATGAAGGTTATATAACTTTAAAGGCATCTAATGGTATAGAGGCATTAGAGCTTTTAAAAACT
AATAATGTTCATCTTATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MIHKIKENIVPLSLMLIIPVVNVFYAILNNSNRGVYTLVTDLDKSMPFIPAFSVPYMVWYPFIIISLIYMCFKNRKLYYK
SLSSIIISLITSYIIFFFFQTTVPRPKVIGNDIFSDIVKFIYSTDIAYNCFPSIHVITTYIIMRYMLNHEMKNSKIINIT
VIILGILIILSTQFIKQHVLLDAIFAIILGEGIYNMINYYGLEMIKKCQQKKSLLLMMKKKSEI

Sequences:

>Translated_224_residues
MIHKIKENIVPLSLMLIIPVVNVFYAILNNSNRGVYTLVTDLDKSMPFIPAFSVPYMVWYPFIIISLIYMCFKNRKLYYK
SLSSIIISLITSYIIFFFFQTTVPRPKVIGNDIFSDIVKFIYSTDIAYNCFPSIHVITTYIIMRYMLNHEMKNSKIINIT
VIILGILIILSTQFIKQHVLLDAIFAIILGEGIYNMINYYGLEMIKKCQQKKSLLLMMKKKSEI
>Mature_224_residues
MIHKIKENIVPLSLMLIIPVVNVFYAILNNSNRGVYTLVTDLDKSMPFIPAFSVPYMVWYPFIIISLIYMCFKNRKLYYK
SLSSIIISLITSYIIFFFFQTTVPRPKVIGNDIFSDIVKFIYSTDIAYNCFPSIHVITTYIIMRYMLNHEMKNSKIINIT
VIILGILIILSTQFIKQHVLLDAIFAIILGEGIYNMINYYGLEMIKKCQQKKSLLLMMKKKSEI

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26117; Mature: 26117

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHKIKENIVPLSLMLIIPVVNVFYAILNNSNRGVYTLVTDLDKSMPFIPAFSVPYMVWY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCCCCCCCCHHHHHH
PFIIISLIYMCFKNRKLYYKSLSSIIISLITSYIIFFFFQTTVPRPKVIGNDIFSDIVKF
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
IYSTDIAYNCFPSIHVITTYIIMRYMLNHEMKNSKIINITVIILGILIILSTQFIKQHVL
HHHHCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
LDAIFAIILGEGIYNMINYYGLEMIKKCQQKKSLLLMMKKKSEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIHKIKENIVPLSLMLIIPVVNVFYAILNNSNRGVYTLVTDLDKSMPFIPAFSVPYMVWY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCCCCCCCCHHHHHH
PFIIISLIYMCFKNRKLYYKSLSSIIISLITSYIIFFFFQTTVPRPKVIGNDIFSDIVKF
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
IYSTDIAYNCFPSIHVITTYIIMRYMLNHEMKNSKIINITVIILGILIILSTQFIKQHVL
HHHHCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
LDAIFAIILGEGIYNMINYYGLEMIKKCQQKKSLLLMMKKKSEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA