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The map label for this gene is 226947554

Identifier: 226947554

GI number: 226947554

Start: 412721

End: 413128

Strand: Direct

Name: 226947554

Synonym: CLM_0391

Alternate gene names: NA

Gene position: 412721-413128 (Clockwise)

Preceding gene: 226947553

Following gene: 226947555

Centisome position: 9.93

GC content: 26.72

Gene sequence:

>408_bases
ATGTTTTTAGAAAATGAAAGTAAAAAAAAGATAGTTGAATTTTTTAAAGAAAAATTACAACCAAATTTTATATACTTATT
CGGATCTTTTGCTAAGGGAGAAGGTAGAGAAGATAGTGACATAGATGTAGCTATTCATGCAAATAGAGAGTTAGATGAAT
ATGAATTATTTGTCTTAGGGAATGAATTAAGTTTTGTTATGAAAAGAGATGTTCAAATTATTGATTTAAAGGATATAAGC
ACTGTATTTGCGGCACAAATAGTAGGTACCAAAGAGATTCTTTATAGCCAAGATGAAAATTTAAGAATCCAGTATGATAT
GAGATCTTTTAAAGATTATGTAAAATTAAATGAAGAGAGACAAATTGTTATGGATTCAATAAAGAAGGATGGTAAAGTTT
ATGGTTAA

Upstream 100 bases:

>100_bases
AAAATATATATAGCTTTTATATAAAACTTAATATGTTTAAATAAACTAACCGTTAGTATATAATAATATATAATAAGTTA
AATATTTAGGAGAGATAGCT

Downstream 100 bases:

>100_bases
TGATGTTTTATATAATAAAAAAAGCATAATAGAAAAGTGTTTAATAAGAGTGTTTAGAGGGTAATGTAGCAGCCAGCTGC
ATTACCCTCTAGTAATTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: DNA Polymerase Beta Subunit; Nucleotidyltransferase; DNA Polymerase Beta Domain-Containing Protein Region; Xin-Antitoxin System Toxin Component; DNA Polymerase Subunit Beta

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MFLENESKKKIVEFFKEKLQPNFIYLFGSFAKGEGREDSDIDVAIHANRELDEYELFVLGNELSFVMKRDVQIIDLKDIS
TVFAAQIVGTKEILYSQDENLRIQYDMRSFKDYVKLNEERQIVMDSIKKDGKVYG

Sequences:

>Translated_135_residues
MFLENESKKKIVEFFKEKLQPNFIYLFGSFAKGEGREDSDIDVAIHANRELDEYELFVLGNELSFVMKRDVQIIDLKDIS
TVFAAQIVGTKEILYSQDENLRIQYDMRSFKDYVKLNEERQIVMDSIKKDGKVYG
>Mature_135_residues
MFLENESKKKIVEFFKEKLQPNFIYLFGSFAKGEGREDSDIDVAIHANRELDEYELFVLGNELSFVMKRDVQIIDLKDIS
TVFAAQIVGTKEILYSQDENLRIQYDMRSFKDYVKLNEERQIVMDSIKKDGKVYG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15849; Mature: 15849

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLENESKKKIVEFFKEKLQPNFIYLFGSFAKGEGREDSDIDVAIHANRELDEYELFVLG
CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEEC
NELSFVMKRDVQIIDLKDISTVFAAQIVGTKEILYSQDENLRIQYDMRSFKDYVKLNEER
CCCEEEECCCCEEEEHHHHHHHHHHHHCCHHHHHCCCCCCEEEEECHHHHHHHHHCCCCH
QIVMDSIKKDGKVYG
HHHHHHHHCCCCCCC
>Mature Secondary Structure
MFLENESKKKIVEFFKEKLQPNFIYLFGSFAKGEGREDSDIDVAIHANRELDEYELFVLG
CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEEC
NELSFVMKRDVQIIDLKDISTVFAAQIVGTKEILYSQDENLRIQYDMRSFKDYVKLNEER
CCCEEEECCCCEEEEHHHHHHHHHHHHCCHHHHHCCCCCCEEEEECHHHHHHHHHCCCCH
QIVMDSIKKDGKVYG
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA