| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is fhuB [H]
Identifier: 226947543
GI number: 226947543
Start: 399795
End: 400823
Strand: Direct
Name: fhuB [H]
Synonym: CLM_0379
Alternate gene names: 226947543
Gene position: 399795-400823 (Clockwise)
Preceding gene: 226947542
Following gene: 226947544
Centisome position: 9.62
GC content: 33.62
Gene sequence:
>1029_bases ATGGGAAATGAAACTGTAATAACAGATAAAAAAAGTAAATTAAGCTTTACTTTATATATGATTATTGGGCTTATATTTTT AATTATTGTTATAGTCGGATCTATTTCTTTTGGTGCTGCCAAAATGGATATAGATACAGCATGGAAAGCCATATTAGAAT TTAATTCAGATATAACAGAGCATCAAATTATTAGAACGCTGCGTTTGCCTCGTACTTTTGGAGATATGGTTGTAGGGGCA AGTCTTGCAGTAGCAGGTGCAATAATGCAAGGAAGTACAAGAAACCCTTTAGCAGACTCAGGACTAATGGGAGTAAATTC AGGAGCTACTTTTTTAATAGCTTTATGCCTTGCTTTTTATCCAGGACATACCTATTTTAAACTTAGTATGTTTTCGTTTG TAGGAGCAGGAATTGGAGTTGGAGTAACTTATTTTATTGCATCATTAAGTAAAAGAGGAATCACACCTCAAAGACTTGTA CTATCTGGTATATCTATATCTATGCTTTTTAGTGCTATGAGTTCATTTATAGGCATTAAGTATAATATTGGTCAACAGCT TAGCTATTGGTCAGCAGGGGGTGTTGCTAGCATTTCATGGAGTGAACTTATGGTAGTAATGCCAGCTTTTATAATAGGCA TAATAGTATCTATTATTATTTCTCCTTCAATTACTATGTTAAGTTTAGGAGAAGAAGTAGCTAAAGGGTTAGGACAGAAA ACTATAATGATTAAATTTATTGCATCCTTGGTTGTACTTATATTAGCTGGAATTTCTGTTTCCATAGCAGGACCTATAGG ATTTGTAGGCCTTATTGTACCTCATATAATTAGGTTTTTTGTAGGGGTAGATTATAGATATATTATACCAGCTTCTGCCT TATATGGTGCTTGTTTTATGGTAGCAGCTGATCTTATGGGAAGGTTAATTAATAGACCATATGAGACTCCACTAGGAATA ATATTTGCTATTATAGGAGTACCTTTCTTTCTCTATATATCTCGCAGAGAAAGGAGAGCTTTTGAATGA
Upstream 100 bases:
>100_bases TCTATTTTAATTGAATATTTATTATTATATGTAATTTATATAGATGATTGTATTATCCCTTTTTAAAAAACTTAAAGAAA CAACTATGAGGAAGGTTAAT
Downstream 100 bases:
>100_bases AGAAATGTGGCATGTATAAAAAAATAGCAACAATTTTTGCTTTAACTTTACTTTTATTTGTAGCAATTATTATTAGTATG AATTTAGGTAAGATGAATTT
Product: ferrichrome transport system permease FhuB
Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]
Alternate protein names: Ferric hydroxamate uptake protein B; Ferrichrome transport system permease protein fhuB; Iron(III)-hydroxamate import system permease protein fhuB [H]
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MGNETVITDKKSKLSFTLYMIIGLIFLIIVIVGSISFGAAKMDIDTAWKAILEFNSDITEHQIIRTLRLPRTFGDMVVGA SLAVAGAIMQGSTRNPLADSGLMGVNSGATFLIALCLAFYPGHTYFKLSMFSFVGAGIGVGVTYFIASLSKRGITPQRLV LSGISISMLFSAMSSFIGIKYNIGQQLSYWSAGGVASISWSELMVVMPAFIIGIIVSIIISPSITMLSLGEEVAKGLGQK TIMIKFIASLVVLILAGISVSIAGPIGFVGLIVPHIIRFFVGVDYRYIIPASALYGACFMVAADLMGRLINRPYETPLGI IFAIIGVPFFLYISRRERRAFE
Sequences:
>Translated_342_residues MGNETVITDKKSKLSFTLYMIIGLIFLIIVIVGSISFGAAKMDIDTAWKAILEFNSDITEHQIIRTLRLPRTFGDMVVGA SLAVAGAIMQGSTRNPLADSGLMGVNSGATFLIALCLAFYPGHTYFKLSMFSFVGAGIGVGVTYFIASLSKRGITPQRLV LSGISISMLFSAMSSFIGIKYNIGQQLSYWSAGGVASISWSELMVVMPAFIIGIIVSIIISPSITMLSLGEEVAKGLGQK TIMIKFIASLVVLILAGISVSIAGPIGFVGLIVPHIIRFFVGVDYRYIIPASALYGACFMVAADLMGRLINRPYETPLGI IFAIIGVPFFLYISRRERRAFE >Mature_341_residues GNETVITDKKSKLSFTLYMIIGLIFLIIVIVGSISFGAAKMDIDTAWKAILEFNSDITEHQIIRTLRLPRTFGDMVVGAS LAVAGAIMQGSTRNPLADSGLMGVNSGATFLIALCLAFYPGHTYFKLSMFSFVGAGIGVGVTYFIASLSKRGITPQRLVL SGISISMLFSAMSSFIGIKYNIGQQLSYWSAGGVASISWSELMVVMPAFIIGIIVSIIISPSITMLSLGEEVAKGLGQKT IMIKFIASLVVLILAGISVSIAGPIGFVGLIVPHIIRFFVGVDYRYIIPASALYGACFMVAADLMGRLINRPYETPLGII FAIIGVPFFLYISRRERRAFE
Specific function: Part of the ABC transporter complex fhuBGCD involved in iron(3+)-hydroxamate import. Responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790741, Length=294, Percent_Identity=32.312925170068, Blast_Score=156, Evalue=2e-39, Organism=Escherichia coli, GI1790740, Length=317, Percent_Identity=30.2839116719243, Blast_Score=149, Evalue=3e-37, Organism=Escherichia coli, GI1786805, Length=281, Percent_Identity=33.4519572953737, Blast_Score=149, Evalue=3e-37, Organism=Escherichia coli, GI1788004, Length=282, Percent_Identity=33.3333333333333, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1786347, Length=343, Percent_Identity=27.6967930029155, Blast_Score=121, Evalue=5e-29, Organism=Escherichia coli, GI1786804, Length=279, Percent_Identity=27.2401433691756, Blast_Score=91, Evalue=9e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 36847; Mature: 36715
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNETVITDKKSKLSFTLYMIIGLIFLIIVIVGSISFGAAKMDIDTAWKAILEFNSDITE CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHCCCCHH HQIIRTLRLPRTFGDMVVGASLAVAGAIMQGSTRNPLADSGLMGVNSGATFLIALCLAFY HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC PGHTYFKLSMFSFVGAGIGVGVTYFIASLSKRGITPQRLVLSGISISMLFSAMSSFIGIK CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHCEE YNIGQQLSYWSAGGVASISWSELMVVMPAFIIGIIVSIIISPSITMLSLGEEVAKGLGQK ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCH TIMIKFIASLVVLILAGISVSIAGPIGFVGLIVPHIIRFFVGVDYRYIIPASALYGACFM HHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHH VAADLMGRLINRPYETPLGIIFAIIGVPFFLYISRRERRAFE HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GNETVITDKKSKLSFTLYMIIGLIFLIIVIVGSISFGAAKMDIDTAWKAILEFNSDITE CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHCCCCHH HQIIRTLRLPRTFGDMVVGASLAVAGAIMQGSTRNPLADSGLMGVNSGATFLIALCLAFY HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC PGHTYFKLSMFSFVGAGIGVGVTYFIASLSKRGITPQRLVLSGISISMLFSAMSSFIGIK CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHCEE YNIGQQLSYWSAGGVASISWSELMVVMPAFIIGIIVSIIISPSITMLSLGEEVAKGLGQK ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCH TIMIKFIASLVVLILAGISVSIAGPIGFVGLIVPHIIRFFVGVDYRYIIPASALYGACFM HHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHH VAADLMGRLINRPYETPLGIIFAIIGVPFFLYISRRERRAFE HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]
Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377; 8388528 [H]