Click here to switch to the map view.

The map label for this gene is yxeB [H]

Identifier: 226947542

GI number: 226947542

Start: 398654

End: 399592

Strand: Direct

Name: yxeB [H]

Synonym: CLM_0378

Alternate gene names: 226947542

Gene position: 398654-399592 (Clockwise)

Preceding gene: 226947540

Following gene: 226947543

Centisome position: 9.59

GC content: 30.67

Gene sequence:

>939_bases
ATGAAATCAACAAAAGGAAAATTAATTTTTACTCTTTGTTTAATTCTTATGTTTTCTGTATTGGTTATAGGATGCTCTAA
GAGCACTAGTACCAATAGTGGTGGGGAGTCAAATAAGGAGCATAAAACTAGAACTATATCCACAGCGATGGGAAAAGTTG
AAGTACCTGCAAATCCAAAGAGAATTGTTATAAATTATTTTCAAGGAGATTTACTTGCACTAGGTGTAAAACCTTTAGCT
ACATCTCTTATGGAAGGTAATATTGCACTTAAAGATGAACTTAAAGGTGTTAAAATCGTAGAAAAGTGGGAACCTGAAGA
AATAATGGCTCTTAAACCAGATTTAATAATTGTAATAAGTGAAGAAGAGTACAAAAAATATAATAAAATCGCACCAACTA
TATTTGTTCCATTTACTAAGATTTCCTCAGAAGAAAGATTAACTCTTATAGCTGAAGCGGTTGGAAAACAAGAAGAAGCA
AAGAAAGTAATTAATAATTTTAAAAACAAAGTAGAAACTAGCAAAAAAAAGTTAGAAGTGGCAGGAGTGATGGATAAGAG
TTTTACACTTTTAGAACAAGGTGCAAAGGAAATAATGGTATTTGGGGATAAATGGGGAAGAGGTGGAGAAATATTTTATG
ACTATCTTGGACTAAAAGCTCCTAATGTGATAAAAAAAGAAATAATAAATGGTGATCAAAATAGAAGCATTTCCATTGAA
GCTTTACCAGAATATTGTGGAGACTATATAATACAAGCAGTTTGGAAGTATGGCGGGGATAACTTAAAAGATAATGAAGT
ATGGAGAAACTTACCTGCTGTAAAAGAAAACAGAATTATAAAAACAGATGGAGACTTATTTTACTATATGGATTTATACT
CCATGGATAAACAACTTGATTATATAGTTAATGCAATTCTTCAAACTACTAAAAAGTAA

Upstream 100 bases:

>100_bases
ATTATTGACACATGAAAAAGACTGTTGATATAATGACTCTAAAATCAGCTATAGCTAAAAGGTATATTACTATAAATATT
ATAAAAATGGGAGGAGAAAA

Downstream 100 bases:

>100_bases
ATTTTAGGAAGTGAGAATATTTAAATAATATAATAAAGGAAAAGTATGAAAACATTAAGACATAAATTATAAGCATTATA
AAAAAGGGAAGAATACTAGC

Product: iron compound ABC transporter iron compound-binding protein

Products: NA

Alternate protein names: Ferric hydroxamate uptake protein yxeB; Iron(III)-hydroxamate-binding protein yxeB [H]

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MKSTKGKLIFTLCLILMFSVLVIGCSKSTSTNSGGESNKEHKTRTISTAMGKVEVPANPKRIVINYFQGDLLALGVKPLA
TSLMEGNIALKDELKGVKIVEKWEPEEIMALKPDLIIVISEEEYKKYNKIAPTIFVPFTKISSEERLTLIAEAVGKQEEA
KKVINNFKNKVETSKKKLEVAGVMDKSFTLLEQGAKEIMVFGDKWGRGGEIFYDYLGLKAPNVIKKEIINGDQNRSISIE
ALPEYCGDYIIQAVWKYGGDNLKDNEVWRNLPAVKENRIIKTDGDLFYYMDLYSMDKQLDYIVNAILQTTKK

Sequences:

>Translated_312_residues
MKSTKGKLIFTLCLILMFSVLVIGCSKSTSTNSGGESNKEHKTRTISTAMGKVEVPANPKRIVINYFQGDLLALGVKPLA
TSLMEGNIALKDELKGVKIVEKWEPEEIMALKPDLIIVISEEEYKKYNKIAPTIFVPFTKISSEERLTLIAEAVGKQEEA
KKVINNFKNKVETSKKKLEVAGVMDKSFTLLEQGAKEIMVFGDKWGRGGEIFYDYLGLKAPNVIKKEIINGDQNRSISIE
ALPEYCGDYIIQAVWKYGGDNLKDNEVWRNLPAVKENRIIKTDGDLFYYMDLYSMDKQLDYIVNAILQTTKK
>Mature_312_residues
MKSTKGKLIFTLCLILMFSVLVIGCSKSTSTNSGGESNKEHKTRTISTAMGKVEVPANPKRIVINYFQGDLLALGVKPLA
TSLMEGNIALKDELKGVKIVEKWEPEEIMALKPDLIIVISEEEYKKYNKIAPTIFVPFTKISSEERLTLIAEAVGKQEEA
KKVINNFKNKVETSKKKLEVAGVMDKSFTLLEQGAKEIMVFGDKWGRGGEIFYDYLGLKAPNVIKKEIINGDQNRSISIE
ALPEYCGDYIIQAVWKYGGDNLKDNEVWRNLPAVKENRIIKTDGDLFYYMDLYSMDKQLDYIVNAILQTTKK

Specific function: Part of the ABC transporter complex fhuCBGD involved in iron(3+)-hydroxamate import. Binds the iron(3+)-hydroxamate complex and transfers it to the membrane-bound permease. Partially required for the transport of desferrioxamine [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 35139; Mature: 35139

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTKGKLIFTLCLILMFSVLVIGCSKSTSTNSGGESNKEHKTRTISTAMGKVEVPANPK
CCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHCCEEECCCCCC
RIVINYFQGDLLALGVKPLATSLMEGNIALKDELKGVKIVEKWEPEEIMALKPDLIIVIS
EEEEEECCCCEEEECHHHHHHHHHCCCEEEHHCCCCCEEEECCCCCHHEEECCCEEEEEC
EEEYKKYNKIAPTIFVPFTKISSEERLTLIAEAVGKQEEAKKVINNFKNKVETSKKKLEV
CHHHHHHHCCCCEEEEEEHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AGVMDKSFTLLEQGAKEIMVFGDKWGRGGEIFYDYLGLKAPNVIKKEIINGDQNRSISIE
HHCCCHHHHHHHCCCCEEEEECCCCCCCCCEEHHHHCCCCCHHHHHHHHCCCCCCEEEEE
ALPEYCGDYIIQAVWKYGGDNLKDNEVWRNLPAVKENRIIKTDGDLFYYMDLYSMDKQLD
ECHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHCCCEEEECCCEEEEEEHHHHHHHHH
YIVNAILQTTKK
HHHHHHHHHCCC
>Mature Secondary Structure
MKSTKGKLIFTLCLILMFSVLVIGCSKSTSTNSGGESNKEHKTRTISTAMGKVEVPANPK
CCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHCCEEECCCCCC
RIVINYFQGDLLALGVKPLATSLMEGNIALKDELKGVKIVEKWEPEEIMALKPDLIIVIS
EEEEEECCCCEEEECHHHHHHHHHCCCEEEHHCCCCCEEEECCCCCHHEEECCCEEEEEC
EEEYKKYNKIAPTIFVPFTKISSEERLTLIAEAVGKQEEAKKVINNFKNKVETSKKKLEV
CHHHHHHHCCCCEEEEEEHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AGVMDKSFTLLEQGAKEIMVFGDKWGRGGEIFYDYLGLKAPNVIKKEIINGDQNRSISIE
HHCCCHHHHHHHCCCCEEEEECCCCCCCCCEEHHHHCCCCCHHHHHHHHCCCCCCEEEEE
ALPEYCGDYIIQAVWKYGGDNLKDNEVWRNLPAVKENRIIKTDGDLFYYMDLYSMDKQLD
ECHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHCCCEEEECCCEEEEEEHHHHHHHHH
YIVNAILQTTKK
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377 [H]