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The map label for this gene is cggR [H]

Identifier: 226947446

GI number: 226947446

Start: 261066

End: 262097

Strand: Direct

Name: cggR [H]

Synonym: CLM_0275

Alternate gene names: 226947446

Gene position: 261066-262097 (Clockwise)

Preceding gene: 226947445

Following gene: 226947447

Centisome position: 6.28

GC content: 30.23

Gene sequence:

>1032_bases
ATGGAAGATATTCTAAAGTTGCAGCAAAAAATAGTTCCGGAAATGTTAAAGTTATTGGAAAAAAGATATAACATATTAAG
GACTATTTACTATAAACAACCTATAGGAAGAAGAGTTTTAGCAAATGATTTGGAAATAGGGGAAAGAATAGTAAGAACGG
AAATTAACTTTCTAAAAAGTCAGAGCTTAATAGATATTAATTCTTCCGGGATGACTGTAACAAAAGAAGGAGAAGAGATA
ATAGATAGGTTAAAATCCTTTATACATGAAGTAAAAGGACTAAAAGAAATAGAAAGTATACTTAAGAACAAATTAGAAAT
ATTTGAAGTTATAATTGTTCCAGGAAATTTAGATGAAGATATAACAGTAAAAAATGAATTGGGAAAAGCTGCAGCTAATT
ATTTAAAGAATATAGTACAAGATAAGGATATAATAGCATTGACAGGTGGTAGTACTGTAAAAGAAGTTGTAGATAATATG
CCAAAAATAAATACCTTAAAGGATGCAGTTGTAGTTCCGGCAAGAGGTGGCATAGGAAGAGACGTAGAGCTACAAGCTAA
TACTTTAGTTGCAAACTTAGCTTCTAAAATTAATTCTAATTATAAATTGATGCATGTACAGGATAACCTTAGCGAGGCAG
CATTGAAAGCTGTTATGGAAGAAAAATCAATAAAAGAAGTATTAGATATGATACACAAAGTTAATATACTAATACACGGC
ATAGGAATAGCTGAAGTAATGGCTACTAGAAGAGGTATTCCATCAGAAGAAATAGCTTATATAGAAGAAAAAAAAGCTGT
AGCCGAAGCTTTTGGATATTACTTTGATATGAAAGGTAATATTGTACATTCAAGCCCAACTATAGGAATAAAAAGAGAAA
GCATAAGAAATGCAAACAAACTTATAGCAGTATCAGGGGGCAAAAAAAAGGCTAAAGCAATACTGGCAGCAGAAGTTAGA
AATAAAAATAGTGTATTAATAACAGATGAGGGAGCTGCTAGAGAAATTATTAATATTTTAGAAAATGAATAA

Upstream 100 bases:

>100_bases
AAAAGTAGGAAGGATTATCTTATAATATAGGTGGGACATAAAAAAGATACAAGGGACTTAAAATGACCAAGGGTTTAATA
GAAGCTGAGGAGTGTTCACA

Downstream 100 bases:

>100_bases
TACTAAATAATTTAATTTATAAAAGATAAAAATATATATAAAAAGAAAAATGTTTATAATTTTAGGAGGTACTTATAATG
GTTAAAGTTGCTATTAATGG

Product: central glycolytic genes regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MEDILKLQQKIVPEMLKLLEKRYNILRTIYYKQPIGRRVLANDLEIGERIVRTEINFLKSQSLIDINSSGMTVTKEGEEI
IDRLKSFIHEVKGLKEIESILKNKLEIFEVIIVPGNLDEDITVKNELGKAAANYLKNIVQDKDIIALTGGSTVKEVVDNM
PKINTLKDAVVVPARGGIGRDVELQANTLVANLASKINSNYKLMHVQDNLSEAALKAVMEEKSIKEVLDMIHKVNILIHG
IGIAEVMATRRGIPSEEIAYIEEKKAVAEAFGYYFDMKGNIVHSSPTIGIKRESIRNANKLIAVSGGKKKAKAILAAEVR
NKNSVLITDEGAAREIINILENE

Sequences:

>Translated_343_residues
MEDILKLQQKIVPEMLKLLEKRYNILRTIYYKQPIGRRVLANDLEIGERIVRTEINFLKSQSLIDINSSGMTVTKEGEEI
IDRLKSFIHEVKGLKEIESILKNKLEIFEVIIVPGNLDEDITVKNELGKAAANYLKNIVQDKDIIALTGGSTVKEVVDNM
PKINTLKDAVVVPARGGIGRDVELQANTLVANLASKINSNYKLMHVQDNLSEAALKAVMEEKSIKEVLDMIHKVNILIHG
IGIAEVMATRRGIPSEEIAYIEEKKAVAEAFGYYFDMKGNIVHSSPTIGIKRESIRNANKLIAVSGGKKKAKAILAAEVR
NKNSVLITDEGAAREIINILENE
>Mature_343_residues
MEDILKLQQKIVPEMLKLLEKRYNILRTIYYKQPIGRRVLANDLEIGERIVRTEINFLKSQSLIDINSSGMTVTKEGEEI
IDRLKSFIHEVKGLKEIESILKNKLEIFEVIIVPGNLDEDITVKNELGKAAANYLKNIVQDKDIIALTGGSTVKEVVDNM
PKINTLKDAVVVPARGGIGRDVELQANTLVANLASKINSNYKLMHVQDNLSEAALKAVMEEKSIKEVLDMIHKVNILIHG
IGIAEVMATRRGIPSEEIAYIEEKKAVAEAFGYYFDMKGNIVHSSPTIGIKRESIRNANKLIAVSGGKKKAKAILAAEVR
NKNSVLITDEGAAREIINILENE

Specific function: Unknown

COG id: COG2390

COG function: function code K; Transcriptional regulator, contains sigma factor-related N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sorC transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI1787791, Length=255, Percent_Identity=25.4901960784314, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04198 Sugar-bind [H]

EC number: NA

Molecular weight: Translated: 38161; Mature: 38161

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDILKLQQKIVPEMLKLLEKRYNILRTIYYKQPIGRRVLANDLEIGERIVRTEINFLKS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
QSLIDINSSGMTVTKEGEEIIDRLKSFIHEVKGLKEIESILKNKLEIFEVIIVPGNLDED
CCEEEECCCCCEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHEEEEEEEECCCCCCC
ITVKNELGKAAANYLKNIVQDKDIIALTGGSTVKEVVDNMPKINTLKDAVVVPARGGIGR
CEEHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCCCCCEEEEECCCCCCC
DVELQANTLVANLASKINSNYKLMHVQDNLSEAALKAVMEEKSIKEVLDMIHKVNILIHG
CEEEHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IGIAEVMATRRGIPSEEIAYIEEKKAVAEAFGYYFDMKGNIVHSSPTIGIKRESIRNANK
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCCCEEHHHHCCCCC
LIAVSGGKKKAKAILAAEVRNKNSVLITDEGAAREIINILENE
EEEECCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCC
>Mature Secondary Structure
MEDILKLQQKIVPEMLKLLEKRYNILRTIYYKQPIGRRVLANDLEIGERIVRTEINFLKS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
QSLIDINSSGMTVTKEGEEIIDRLKSFIHEVKGLKEIESILKNKLEIFEVIIVPGNLDED
CCEEEECCCCCEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHEEEEEEEECCCCCCC
ITVKNELGKAAANYLKNIVQDKDIIALTGGSTVKEVVDNMPKINTLKDAVVVPARGGIGR
CEEHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCCCCCEEEEECCCCCCC
DVELQANTLVANLASKINSNYKLMHVQDNLSEAALKAVMEEKSIKEVLDMIHKVNILIHG
CEEEHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IGIAEVMATRRGIPSEEIAYIEEKKAVAEAFGYYFDMKGNIVHSSPTIGIKRESIRNANK
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCCCEEHHHHCCCCC
LIAVSGGKKKAKAILAAEVRNKNSVLITDEGAAREIINILENE
EEEECCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1452037 [H]