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The map label for this gene is atpE

Identifier: 226947375

GI number: 226947375

Start: 181039

End: 181278

Strand: Direct

Name: atpE

Synonym: CLM_0195

Alternate gene names: 226947375

Gene position: 181039-181278 (Clockwise)

Preceding gene: 226947374

Following gene: 226947376

Centisome position: 4.36

GC content: 36.67

Gene sequence:

>240_bases
ATGGATCCAAAAGCATTTGTATCAGGAATGGCGGCTTTAGGAGCAGGAATAGCAGCATTAGCTTGTATAGGAGCAGGAAT
AGGTACAGGAAATGCTACAGGAAAGGCTGTAGAAGGAGTTTCAAGACAACCAGAAGCAAGCGGTAAAATAATGAGTACTC
TTGTTATAGGTAGTGCCTTTTCAGAAGCAACAGCAATTTATGGATTAATAATAGCATTATTTTTAATATTTAAGATTTAA

Upstream 100 bases:

>100_bases
CAAATGGTTATATTTGTTATGTTAACTATGATTAATATAAAAGTAATAGCAGAACATTAATAAAAAAACATGAATTTTTA
AATTTAAGGAGGAATTTGGT

Downstream 100 bases:

>100_bases
GGTAATTTAATTTTATAAGTACCTATTTATTATAGGTGCTTATAAAATTTAAGGCCGAAGGGAGGCTTCCTATATATGAA
TATAAGCATTCCGCAAATTA

Product: F0F1 ATP synthase subunit C

Products: ADP; phosphate

Alternate protein names: ATP synthase F(0) sector subunit c; F-type ATPase subunit c; F-ATPase subunit c; Lipid-binding protein

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MDPKAFVSGMAALGAGIAALACIGAGIGTGNATGKAVEGVSRQPEASGKIMSTLVIGSAFSEATAIYGLIIALFLIFKI

Sequences:

>Translated_79_residues
MDPKAFVSGMAALGAGIAALACIGAGIGTGNATGKAVEGVSRQPEASGKIMSTLVIGSAFSEATAIYGLIIALFLIFKI
>Mature_79_residues
MDPKAFVSGMAALGAGIAALACIGAGIGTGNATGKAVEGVSRQPEASGKIMSTLVIGSAFSEATAIYGLIIALFLIFKI

Specific function: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits

COG id: COG0636

COG function: function code C; F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase C chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPL_CLOB1 (A7FQH4)

Other databases:

- EMBL:   CP000726
- RefSeq:   YP_001382558.1
- ProteinModelPortal:   A7FQH4
- SMR:   A7FQH4
- STRING:   A7FQH4
- GeneID:   5396418
- GenomeReviews:   CP000726_GR
- KEGG:   cba:CLB_0187
- eggNOG:   COG0636
- HOGENOM:   HBG753983
- OMA:   VEGVSRN
- ProtClustDB:   PRK13469
- BioCyc:   CBOT441770:CLB_0187-MONOMER
- HAMAP:   MF_01396
- InterPro:   IPR000454
- InterPro:   IPR005953
- InterPro:   IPR020537
- InterPro:   IPR002379
- Gene3D:   G3DSA:1.20.20.10
- PRINTS:   PR00124
- TIGRFAMs:   TIGR01260

Pfam domain/function: PF00137 ATP-synt_C; SSF81333 ATPase_F0/V0_c

EC number: 3.6.3.15

Molecular weight: Translated: 7759; Mature: 7759

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS00605 ATPASE_C; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xffc6900)-; HASH(0x119d0d0c)-;

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPKAFVSGMAALGAGIAALACIGAGIGTGNATGKAVEGVSRQPEASGKIMSTLVIGSAF
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHH
SEATAIYGLIIALFLIFKI
HHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MDPKAFVSGMAALGAGIAALACIGAGIGTGNATGKAVEGVSRQPEASGKIMSTLVIGSAF
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHH
SEATAIYGLIIALFLIFKI
HHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O

Specific reaction: ATP + H2O = ADP + phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA