Click here to switch to the map view.

The map label for this gene is spoIIR [H]

Identifier: 226947349

GI number: 226947349

Start: 157520

End: 158152

Strand: Direct

Name: spoIIR [H]

Synonym: CLM_0169

Alternate gene names: 226947349

Gene position: 157520-158152 (Clockwise)

Preceding gene: 226947348

Following gene: 226947351

Centisome position: 3.79

GC content: 23.22

Gene sequence:

>633_bases
ATGAAAAAAATATTAGTCTTTATGTTGAGTATTATAGTTGTATTTTTTATTAGCCTTAAATCTTTTAATTTATTTCATAA
AAGTACAAGCGTTGAGCAAAAAGATATTTCAAATAAAATAATAAGGTTTCATGTTTTAGCAAATAGTGATAGTATAGAAG
ATCAAAGTTTGAAACTTAAAGTTAAAGATGAAATAATAAAATATATGATGCCAAAATTAGATAAAAGCAGTAGTATAGAT
GAATCAAGAAAAATACTAAAAGAAAATGATAAAGAGATAAAAAAAATAGCAGAAAATATTATAAATAAAAATGGATATAA
ATATTCAGTTAATACTTATCTAGGACAAGACCAATTTCCTATAAAAACCTATGGTAATATAACTTTGCCACAGGGTAAAT
ATGAAGCTTATAAAATAGTTATAGGTAATGGTCAAGGCCAAAACTGGTGGTGTGTTATGTTTCCTCCATTATGTTTTGTT
GATGTAACAAAAGGAGAAGTATCAACAAAGAAAACGGAACAAAAAATGAAAAAAGTATTAAAAGAAGAAGAGTTGAAGTG
TATTAATAATTCAAAAAATTCTTATGAAATAAAGTTTAAAGTTGTAGAAAAGATTAATAAATTAAAAAGATAA

Upstream 100 bases:

>100_bases
GTTAGAAGAATAGGAGCAATAGAATAATTTTTTTAAATTGAATATAACTATAATATTTGGGAATAATAACTAATAAATAA
GATCAATAGGGGGAATATAT

Downstream 100 bases:

>100_bases
ATAAAACTCTGTATTTGAAAATAATACAGAGTAATTTTATAACAAAAATTTTTCCGCTGTTTTTATAAAATATTTTTCTA
TAGATTTAAACAAATTTTTA

Product: stage II sporulation protein R

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKKILVFMLSIIVVFFISLKSFNLFHKSTSVEQKDISNKIIRFHVLANSDSIEDQSLKLKVKDEIIKYMMPKLDKSSSID
ESRKILKENDKEIKKIAENIINKNGYKYSVNTYLGQDQFPIKTYGNITLPQGKYEAYKIVIGNGQGQNWWCVMFPPLCFV
DVTKGEVSTKKTEQKMKKVLKEEELKCINNSKNSYEIKFKVVEKINKLKR

Sequences:

>Translated_210_residues
MKKILVFMLSIIVVFFISLKSFNLFHKSTSVEQKDISNKIIRFHVLANSDSIEDQSLKLKVKDEIIKYMMPKLDKSSSID
ESRKILKENDKEIKKIAENIINKNGYKYSVNTYLGQDQFPIKTYGNITLPQGKYEAYKIVIGNGQGQNWWCVMFPPLCFV
DVTKGEVSTKKTEQKMKKVLKEEELKCINNSKNSYEIKFKVVEKINKLKR
>Mature_210_residues
MKKILVFMLSIIVVFFISLKSFNLFHKSTSVEQKDISNKIIRFHVLANSDSIEDQSLKLKVKDEIIKYMMPKLDKSSSID
ESRKILKENDKEIKKIAENIINKNGYKYSVNTYLGQDQFPIKTYGNITLPQGKYEAYKIVIGNGQGQNWWCVMFPPLCFV
DVTKGEVSTKKTEQKMKKVLKEEELKCINNSKNSYEIKFKVVEKINKLKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014202 [H]

Pfam domain/function: PF09551 Spore_II_R [H]

EC number: NA

Molecular weight: Translated: 24461; Mature: 24461

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILVFMLSIIVVFFISLKSFNLFHKSTSVEQKDISNKIIRFHVLANSDSIEDQSLKLK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCEEEEEEEEECCCCCCCCCEEEE
VKDEIIKYMMPKLDKSSSIDESRKILKENDKEIKKIAENIINKNGYKYSVNTYLGQDQFP
HHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC
IKTYGNITLPQGKYEAYKIVIGNGQGQNWWCVMFPPLCFVDVTKGEVSTKKTEQKMKKVL
EEECCCEECCCCCCEEEEEEEECCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHHH
KEEELKCINNSKNSYEIKFKVVEKINKLKR
HHHHHHHHCCCCCCEEEEHHHHHHHHHHCC
>Mature Secondary Structure
MKKILVFMLSIIVVFFISLKSFNLFHKSTSVEQKDISNKIIRFHVLANSDSIEDQSLKLK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCEEEEEEEEECCCCCCCCCEEEE
VKDEIIKYMMPKLDKSSSIDESRKILKENDKEIKKIAENIINKNGYKYSVNTYLGQDQFP
HHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC
IKTYGNITLPQGKYEAYKIVIGNGQGQNWWCVMFPPLCFVDVTKGEVSTKKTEQKMKKVL
EEECCCEECCCCCCEEEEEEEECCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHHH
KEEELKCINNSKNSYEIKFKVVEKINKLKR
HHHHHHHHCCCCCCEEEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]