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The map label for this gene is cphB [H]

Identifier: 226947342

GI number: 226947342

Start: 148752

End: 149552

Strand: Direct

Name: cphB [H]

Synonym: CLM_0162

Alternate gene names: 226947342

Gene position: 148752-149552 (Clockwise)

Preceding gene: 226947341

Following gene: 226947343

Centisome position: 3.58

GC content: 31.21

Gene sequence:

>801_bases
TTGCAAAGAAAAATACAAGGTAACCTCATAATCATAGGAGGAGCTGAAGATAAAAAAAACGGCAAAGATATATTAAAAGA
AGTATGTAAAAAAATAGATAAAGAAAAAGAAGAGCTATTAATAGCTACTGTAGCATCTGAGCTGCCAGAAGAATTAGGAG
AAGAGTACACAAATATATTTAAAAATTTAGGGGTAAAAAATGTAAAAATATTAAATATAAACAATAGAAAAGATACTCAT
TATGAAGGGAATGTAAATTTAATTAAGAATGCATCTCTTATATTCTTTACTGGAGGAGATCAATTAAGAATAACAAGTTT
ATTAGGAGGAACTCCCCTTTACAGAGCATTAGAAAGAGCCTATAAGGAAGGTTGTATATTTGTGGGAACTTCAGCAGGAG
CTTCAGTTATGAGTGATACTATGATAGTTTCTGGATTAGATGATGAATCACCAAGAAAGTGTACATTAAAAATGGCTCCA
GGATTATCGCTTATAAGAGGAGTAATAATAGATCAACATTTTGCTCAAAGAGGAAGAATAGGAAGACTTTTAACAGGTAT
CGCAGAAAATCCTCAATGGTTAGGAATAGGCATAGATGAGGATACAGCTATTATTGTTAATCCAGAAGGTCAGTTTAAGG
TAATTGGTTCTGGAGCAGTATATATAATAGATGGAACAGAGATAAGTGGTACAAACGTTTCAGAACAATATCCAGACGAA
ATATTATCTATATTTGATGTCAAATTACATGTACTTAAGAATAGAGATAAGTTTGATTTGAACTATAGAAGGCCTATATA
A

Upstream 100 bases:

>100_bases
CAATAATAGTATAAGTATTGTTATATAGAGTATTTTTGTGCATAAAAATAGTTTATGTGGAAAAAATAAAAGATATATAT
AAAAGGAAGGGGTATGTATT

Downstream 100 bases:

>100_bases
CAAAGCATATATGTTTTTGGAAAAGAGGAGGAAATGTTACAACATGAAAATAGAAAATATAAGAGTATTTGAGGGACGAA
ATATTTATTCTCATAAAAAA

Product: cyanophycinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MQRKIQGNLIIIGGAEDKKNGKDILKEVCKKIDKEKEELLIATVASELPEELGEEYTNIFKNLGVKNVKILNINNRKDTH
YEGNVNLIKNASLIFFTGGDQLRITSLLGGTPLYRALERAYKEGCIFVGTSAGASVMSDTMIVSGLDDESPRKCTLKMAP
GLSLIRGVIIDQHFAQRGRIGRLLTGIAENPQWLGIGIDEDTAIIVNPEGQFKVIGSGAVYIIDGTEISGTNVSEQYPDE
ILSIFDVKLHVLKNRDKFDLNYRRPI

Sequences:

>Translated_266_residues
MQRKIQGNLIIIGGAEDKKNGKDILKEVCKKIDKEKEELLIATVASELPEELGEEYTNIFKNLGVKNVKILNINNRKDTH
YEGNVNLIKNASLIFFTGGDQLRITSLLGGTPLYRALERAYKEGCIFVGTSAGASVMSDTMIVSGLDDESPRKCTLKMAP
GLSLIRGVIIDQHFAQRGRIGRLLTGIAENPQWLGIGIDEDTAIIVNPEGQFKVIGSGAVYIIDGTEISGTNVSEQYPDE
ILSIFDVKLHVLKNRDKFDLNYRRPI
>Mature_266_residues
MQRKIQGNLIIIGGAEDKKNGKDILKEVCKKIDKEKEELLIATVASELPEELGEEYTNIFKNLGVKNVKILNINNRKDTH
YEGNVNLIKNASLIFFTGGDQLRITSLLGGTPLYRALERAYKEGCIFVGTSAGASVMSDTMIVSGLDDESPRKCTLKMAP
GLSLIRGVIIDQHFAQRGRIGRLLTGIAENPQWLGIGIDEDTAIIVNPEGQFKVIGSGAVYIIDGTEISGTNVSEQYPDE
ILSIFDVKLHVLKNRDKFDLNYRRPI

Specific function: Exopeptidase that catalyzes the hydrolytic cleavage of multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides [H]

COG id: COG4242

COG function: function code QP; Cyanophycinase and related exopeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005320
- InterPro:   IPR011811 [H]

Pfam domain/function: PF03575 Peptidase_S51 [H]

EC number: =3.4.15.6 [H]

Molecular weight: Translated: 29391; Mature: 29391

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRKIQGNLIIIGGAEDKKNGKDILKEVCKKIDKEKEELLIATVASELPEELGEEYTNIF
CCCEECCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KNLGVKNVKILNINNRKDTHYEGNVNLIKNASLIFFTGGDQLRITSLLGGTPLYRALERA
HHCCCCEEEEEEECCCCCCEECCCEEEEECCEEEEEECCCEEEEEEECCCCHHHHHHHHH
YKEGCIFVGTSAGASVMSDTMIVSGLDDESPRKCTLKMAPGLSLIRGVIIDQHFAQRGRI
HHCCEEEEECCCCCHHHHCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCH
GRLLTGIAENPQWLGIGIDEDTAIIVNPEGQFKVIGSGAVYIIDGTEISGTNVSEQYPDE
HHHHHHHCCCCCEEEEECCCCCEEEECCCCCEEEEECCEEEEEECCEECCCCCCHHCHHH
ILSIFDVKLHVLKNRDKFDLNYRRPI
HHHHHHHHHEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MQRKIQGNLIIIGGAEDKKNGKDILKEVCKKIDKEKEELLIATVASELPEELGEEYTNIF
CCCEECCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KNLGVKNVKILNINNRKDTHYEGNVNLIKNASLIFFTGGDQLRITSLLGGTPLYRALERA
HHCCCCEEEEEEECCCCCCEECCCEEEEECCEEEEEECCCEEEEEEECCCCHHHHHHHHH
YKEGCIFVGTSAGASVMSDTMIVSGLDDESPRKCTLKMAPGLSLIRGVIIDQHFAQRGRI
HHCCEEEEECCCCCHHHHCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCH
GRLLTGIAENPQWLGIGIDEDTAIIVNPEGQFKVIGSGAVYIIDGTEISGTNVSEQYPDE
HHHHHHHCCCCCEEEEECCCCCEEEECCCCCEEEEECCEEEEEECCEECCCCCCHHCHHH
ILSIFDVKLHVLKNRDKFDLNYRRPI
HHHHHHHHHEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10951215 [H]