Definition | Rhodococcus erythropolis PR4, complete genome. |
---|---|
Accession | NC_012490 |
Length | 6,516,310 |
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The map label for this gene is sbcC
Identifier: 226307718
GI number:
Start: 4645655
End: 4648633
Strand: Reverse
Name: sbcC
Synonym: RER_42310
Alternate gene names: NA
Gene position: NA
Preceding gene: 226307719
Following gene: 226307716
Centisome position: NA
GC content: NA
Gene sequence:
>2979_bases GTGAGGCTTCACAAACTCGAAGTCAGCTCTTTCGGGCCCTTTGCCGACACCGTCGAGGTCGACTTCGACCGATTGGGTGC TGACGGGCTGTTCCTTCTGCACGGCGACACCGGTGCAGGCAAGACCACGATCCTCGACGCGGTTTCCTTTGCCCTGTACG GGCGGGTTCCGGGTGCACGCAACGAGGGCAAGCGATTGCTGTCCGATCATGCGCCTGCCGGTTCGGTGCCACGCGTGGAA CTCGAAGCGACCATCAGTGGTCGCAGAATCAAACTTGTTCGTAGTCCAGAGTATTCGCGCCCGAAGAAGCGTGGCACCGG TTCGATCACGGAGAACGCAAAGGCCACACTGACGTGGTTGGACGGCCGCGGCGAAAACCTTTCGCGCATCCCTGACATCG GTGACGAGATCAACCGCCTCATGGGCATGAGCGCTGATCAGTTCTTCCAGGTGGTGCTCTTGCCGCAGGGTGAGTTCGCC AAATTCCTGCGTGCCGAGAGCGACGAGCGAGGCAAACTGCTCGAGCGTCTGTTCGACACCAAGCGGTTTGTCTCCGTCGA GGCATGGTTCGACGCCAAGCGAAAGGCAAGTGCGACCGCGCTCGCGGCCAGGGAGCAATCCGTGCGGCTGCTGCTCGCGA AGGTCGAGACAGCTGCGGGACTCGAGGTAGGCGCCGAGGCACACCCACTGGAATGGTCGCGCAAACTCCTCGCCGAGGCT CAGGACACCCGCGATGCAAGTCTCGCGGAGCTGGTGACCGCGAAAGATGCAGCAGCCGAGGCTAATCGGGTTCTGTCGGC GGCGCAGCGAACCGCAGATCTGGTAGCTCGCCGTAATCGTGCGACCGCTGAGCTCGCAGCATTCAATACGGGCGCCTCCC AAAGAGCTGTGATCGGCGCCGAACTCGAGACCGCCAAGCGTGCACTACCGGTGGCCGCTGTCGCCGGCGATGTGGACGCT GCCGGCTTGCATCTCGCTGCCGCACTCGAATCGATGACCACAGCGATGTCGACCTACTCCGCACTCGACGGTCCGGAGAT TTTCGTGCCGGAGGTGTGGCCACCCACCGACGATGAGCGTCAACGCGTCGTAGCTCGGATCCGGACCTGGCGTGACGAGA TCGTTCGCCTGGACGCAATGGCGGAGGACGCTCGACGAGCCGATGCGGCAGAAGCCGAGATCGAGAAACTCGGAGTTCGG CGAGACACTCTGTCCGAGCGCATCGATGCCATCGCGGTTGAACGCACACAACTGCCAGAACTGGTGCGCTCGGCCGGCCA ACGACTGGAGGATGCGCAACGCGCTCACGCGGCTCTGCCTGGCCTCGAGGCTGCACTCGTAAAAGCGTCGGATGCCGCGA CAGCGGCCCATGAAATCGTTTCTCTGCGTGCACAAGCCGAGAAGATTCGTGTGCAGGTGTTGGATGCGCGCGACGCCCAT CAGAGTGCTCGCGGGCGCTGGCTCGACCTCGTGCAAAAGCGTATCGAGGGCATGGCGGCGGAGTTGGCGAGTTCACTCGC GCCTGGTGACCCATGCCAGGTGTGTGGTTCGCGTGAACACCCTGCGCTGGCTCAGTCGGATGTCGTCACGGTCACCGAGC CCGATCTGGAAGCCGCGTCAGCGGCCGAGCGTGCGGCCGAGAAAGCCCTCAGCAAGGTGGCCGATCGCCAGGTAACCGTC GAACGTGACATCGACCGGGTGATCGCGCGCGGCGGAGACGGCGATTCCGAAGAACTCGACAGGCTCCGCGCCGAGGCACG GAACGCCGTCGACGAGGCGACACACTCTGCCGGTCAGGTTGGAGTGCTGGCACAAAAACTTGCGCAACTCAATGGGCGTG ACACCGAACTACAACAGGAATCCGCTTCTCTGACAGCCGAATTGGCGGCACTTGCCGAGCGTAGGACGACTCTGTCAGCG ACGGTCGAGCAGATTCGAGCGGCGATCGTTGCTGCGGTGGGAGAAGATTCGACCATCGCTGCTCGGCGCTCGCGGTTCGA AGGCCTTGCATCCGCTGCCACGGCGGCGTCCGAAATGCGCGACGACGCCGTTCGTGCGCAGGCCCGATCGGCGGAACTGT CGGCCAAACTGTCCGCTGCTGCGGCCGCTGCCGGATTCGATTCGGTCGAGGCTGCGATCGGAGGGGTGAGATCGCCTGCC CGAATCGCGGCGATCGAAACGGAACTCGCCAAGGCGCGTGACCTCGAGGTTGCCGCCCGGACTGTCCTCGACGACCCCGA AGTTGTTGCGGTGGGTGAAGTCGAGACCGTCGACGTGGACGGCCCTCGCGGCCTCGCGCTTCAGTGCGCCGAGGTAGTGA ACGCGACTGTTGCGGCCGCTTCCCTGGCCGAGAACCGTGTGTCGGATCTCGAACGGTTCAGCGGACAACTCGAGAAGGCC TACGAGGCGGTTGCACCTGAGCGTGAACTGCACGACGAACTCGCTGCCCTCGCAGACGTGATCGCCGGCAAAGGTCAGAA CAGTCGCAAGATGTCGCTGAGAGCGTATGTGCTCGCTTCGCGGTTGGAAGAGATCGCCGTGTCGGCATCGGTTCGTCTGC AGCGGATGTCCGGGGGACGGTACGAGTTCGTGCACAGTGACGAGGCAGGATCTCGGGGTCGCCGCGGCGGTCTGGGACTC GACATCCGGGACGACTTCACGGGCGTCGTTCGCTCGGCGAAGACGCTCTCGGGCGGTGAATCGTTCTTGGCGTCATTGTC TTTGGCGCTCGGACTCGCCGATGTGGTTGCGGCGGAGTCCGGCGGAATCGTTCTCGACACGATGTTCATCGACGAAGGAT TCGGCACCCTCGACGCCGACACCCTCGACTCGGTGATGGCTGTGTTGGACGAGCTTCGCGACGGAGGACGAGTGGTGGGC ATCGTCAGTCACGTGGACGAGATGAGGCAGCGAATCCCGAGTCGCCTGCACGTCATTCGCGGACGTGCAGGCTCCTCGGT GAAGGTGATCGCGGGCTGA
Upstream 100 bases:
>100_bases TGCGTAGTGACCCGTCCGAGCGAGAGGTCACGTTGATGGCCGAAGCGCTCAGCGCTGCCGCGCGCGCCGAGGAGTCCACG GTAGAACTGAGTGAAACCGC
Downstream 100 bases:
>100_bases TCAGGCCTTTTTGTTCTCTACCTCTGACTCGGCGTCGTCGTCTTGATCTTCGAGGATGTCCGAGGCATCGCCGGCGGGCA TCGGCTCGTTGTCGCTTGCG
Product: nuclease SbcCD subunit C
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>992_residues MRLHKLEVSSFGPFADTVEVDFDRLGADGLFLLHGDTGAGKTTILDAVSFALYGRVPGARNEGKRLLSDHAPAGSVPRVE LEATISGRRIKLVRSPEYSRPKKRGTGSITENAKATLTWLDGRGENLSRIPDIGDEINRLMGMSADQFFQVVLLPQGEFA KFLRAESDERGKLLERLFDTKRFVSVEAWFDAKRKASATALAAREQSVRLLLAKVETAAGLEVGAEAHPLEWSRKLLAEA QDTRDASLAELVTAKDAAAEANRVLSAAQRTADLVARRNRATAELAAFNTGASQRAVIGAELETAKRALPVAAVAGDVDA AGLHLAAALESMTTAMSTYSALDGPEIFVPEVWPPTDDERQRVVARIRTWRDEIVRLDAMAEDARRADAAEAEIEKLGVR RDTLSERIDAIAVERTQLPELVRSAGQRLEDAQRAHAALPGLEAALVKASDAATAAHEIVSLRAQAEKIRVQVLDARDAH QSARGRWLDLVQKRIEGMAAELASSLAPGDPCQVCGSREHPALAQSDVVTVTEPDLEAASAAERAAEKALSKVADRQVTV ERDIDRVIARGGDGDSEELDRLRAEARNAVDEATHSAGQVGVLAQKLAQLNGRDTELQQESASLTAELAALAERRTTLSA TVEQIRAAIVAAVGEDSTIAARRSRFEGLASAATAASEMRDDAVRAQARSAELSAKLSAAAAAAGFDSVEAAIGGVRSPA RIAAIETELAKARDLEVAARTVLDDPEVVAVGEVETVDVDGPRGLALQCAEVVNATVAAASLAENRVSDLERFSGQLEKA YEAVAPERELHDELAALADVIAGKGQNSRKMSLRAYVLASRLEEIAVSASVRLQRMSGGRYEFVHSDEAGSRGRRGGLGL DIRDDFTGVVRSAKTLSGGESFLASLSLALGLADVVAAESGGIVLDTMFIDEGFGTLDADTLDSVMAVLDELRDGGRVVG IVSHVDEMRQRIPSRLHVIRGRAGSSVKVIAG
Sequences:
NA
Specific function: NA
COG id: COG0419
COG function: function code L; ATPase involved in DNA repair
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA