Definition | Rhodococcus erythropolis PR4, complete genome. |
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Accession | NC_012490 |
Length | 6,516,310 |
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The map label for this gene is sbcD
Identifier: 226307719
GI number:
Start: 4648630
End: 4649805
Strand: Reverse
Name: sbcD
Synonym: RER_42320
Alternate gene names: NA
Gene position: NA
Preceding gene: 226307721
Following gene: 226307718
Centisome position: NA
GC content: NA
Gene sequence:
>1176_bases ATGAAGATTCTGCACACCTCCGATTGGCACATAGGTCGCACGTTTCACGGCGTCGATCTGTTGGCCGATCAGGCGAGTGT GCTCGGTTCCATCGCGGATTCCGTCCGCGAACACGGTGTTGACGTCGTGGTCGTGCCCGGTGACATCTACGACCGCTCAA TTCCCAGTTCCGACGCGGTCACGGTGTGCAATCGAGGCTTCGAGGCAATCCGGGCGGCCGGAGCGGTCATCGTCGCCACG TCCGGCAACCACGATTCCGCGGTGCGGCTCGGTGCCGGGGCGTCCTTTGCAGCTGCCGGCGGATTGCACTTGATCACCCG AGTCGGCCAGATCGGTACTCCGGTGATGCTCAGTGATCAGTTCGGACCTGTCGCGTTTTACGGGATTCCGTATCTCGAGC CGGAGATCACGCGCGTCGAGTTGGACGTGCCCCGGGCTCGTACTCATTCCGACATCCTCGGTGCGGCAATGTCGCGTGTT CGGCGAGACCTCGCCGAACGAACAGCTACCGATCCGTCGACTCGGTCGGTACTGCTCGCGCATGCCTTTGTCGTGGGCGG TGAGGCGTCTGAATCGGAACGCTCCATTTCGGTCGGCGGAGTGGAGACTGTCGCAGTGGGCGAGTTTGCCGGTGTCGACT ACGTTGCGCTGGGGCATCTGCATTCGCCCCAGATGCTCTCGGAGAGCGTTCGCTACTCAGGTTCACCGTTGCCGTATTCG TTCGGTGAGCGCAGCCACCGCAAGGCTGCGCTTTTGATCGAACTCGACGCAGCCGGACTGTCGTCGGTGCAGCGCCTCGA TCTTCCGGTGATTCGAGGGCTGAGCCAGGTGACGGGAACTCTCGAGGAACTTCTCACCGAGTCGAAGTACGCCGATTCCG AGCAGTGCTACGTCTCCGCTTTGCTCACTGATCCGGTTCGTCCCGTCGATGCCATGAGGCAGCTCCAGGCACGTTTCCCC TTTGCCGTTCATCTCGAATGGCAAAGGCCGGAAGGACAATCGGATCTCAAGTATCGCGACGCGGTACGGGGTCGAACCGA CATGGAGATCGCCCGTGGCTTTGTCTCGGCCGTGCGTAGTGACCCGTCCGAGCGAGAGGTCACGTTGATGGCCGAAGCGC TCAGCGCTGCCGCGCGCGCCGAGGAGTCCACGGTAGAACTGAGTGAAACCGCGTGA
Upstream 100 bases:
>100_bases TGTGTGCAGGGTCACCGGACGTTCGTGGGTTGGGGCACACCGTCGAAGCCGTCAGCGTGGGAGATCGGCAGTGTCGGTGG GCTGCTCTACCGTCGGATTC
Downstream 100 bases:
>100_bases GGCTTCACAAACTCGAAGTCAGCTCTTTCGGGCCCTTTGCCGACACCGTCGAGGTCGACTTCGACCGATTGGGTGCTGAC GGGCTGTTCCTTCTGCACGG
Product: nuclease SbcCD subunit D
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>391_residues MKILHTSDWHIGRTFHGVDLLADQASVLGSIADSVREHGVDVVVVPGDIYDRSIPSSDAVTVCNRGFEAIRAAGAVIVAT SGNHDSAVRLGAGASFAAAGGLHLITRVGQIGTPVMLSDQFGPVAFYGIPYLEPEITRVELDVPRARTHSDILGAAMSRV RRDLAERTATDPSTRSVLLAHAFVVGGEASESERSISVGGVETVAVGEFAGVDYVALGHLHSPQMLSESVRYSGSPLPYS FGERSHRKAALLIELDAAGLSSVQRLDLPVIRGLSQVTGTLEELLTESKYADSEQCYVSALLTDPVRPVDAMRQLQARFP FAVHLEWQRPEGQSDLKYRDAVRGRTDMEIARGFVSAVRSDPSEREVTLMAEALSAAARAEESTVELSETA
Sequences:
NA
Specific function: NA
COG id: COG0420
COG function: function code L; DNA repair exonuclease
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA