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The map label for this gene is slyA [C]

Identifier: 226225377

GI number: 226225377

Start: 2883380

End: 2883802

Strand: Reverse

Name: slyA [C]

Synonym: Lm4b_02800

Alternate gene names: 226225377

Gene position: 2883802-2883380 (Counterclockwise)

Preceding gene: 226225378

Following gene: 226225376

Centisome position: 99.01

GC content: 41.13

Gene sequence:

>423_bases
ATGCGCGGATATTATGATGAAATATCATTTGATGTAAATACGACAGCGAAGAAAATGCATTTATTTTTGCTGCGTTCGAT
TGCAAGTTATGATGTGACACCAGAGCAATGGTCGGTTTTAGAGGGGATTGAGGCGAACGAGCCGATTTCGCAAAAAGAGA
TTGCTCTTTGGACGAAAAAGGACACGCCAACCGTGAATCGGATTGTCGATGTTTTACTTAGGAAAGAGCTTGTTGTGCGG
GAAGTGAGTACAGAAGATAGACGGATTTCACTTTTATCTTTAACGGACAAAGGGAGAAAAGAGACGAATGAACTCCGCGA
TATCGTGGAGGCGAGTTGTGAAAGAATGTTTGCTGGGATTTCTCGCGCAGATTTGGAACAATTCACGGCTATTTTAAAGA
ACATTTCTACTAATATAGAGTAA

Upstream 100 bases:

>100_bases
ACAGTCGTTTATTCGACTGTTTTTCTTGTCAAAAAAGTAATCAGTATGTATAATGGTTGTTATGACAATTATTGTTACGA
CAATAGAAATGAGGATAAAT

Downstream 100 bases:

>100_bases
AGAGGGGTAAATTTTGGAAAATAAGACAAGACTTTGGACGAAGGACTACGTATTTTTATTGTTAGGCAGTGTACTTTTAT
ATATTGGATTTATGGTGTTT

Product: transcriptional regulator (MarR family)

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MRGYYDEISFDVNTTAKKMHLFLLRSIASYDVTPEQWSVLEGIEANEPISQKEIALWTKKDTPTVNRIVDVLLRKELVVR
EVSTEDRRISLLSLTDKGRKETNELRDIVEASCERMFAGISRADLEQFTAILKNISTNIE

Sequences:

>Translated_140_residues
MRGYYDEISFDVNTTAKKMHLFLLRSIASYDVTPEQWSVLEGIEANEPISQKEIALWTKKDTPTVNRIVDVLLRKELVVR
EVSTEDRRISLLSLTDKGRKETNELRDIVEASCERMFAGISRADLEQFTAILKNISTNIE
>Mature_140_residues
MRGYYDEISFDVNTTAKKMHLFLLRSIASYDVTPEQWSVLEGIEANEPISQKEIALWTKKDTPTVNRIVDVLLRKELVVR
EVSTEDRRISLLSLTDKGRKETNELRDIVEASCERMFAGISRADLEQFTAILKNISTNIE

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16108; Mature: 16108

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGYYDEISFDVNTTAKKMHLFLLRSIASYDVTPEQWSVLEGIEANEPISQKEIALWTKK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEEEECC
DTPTVNRIVDVLLRKELVVREVSTEDRRISLLSLTDKGRKETNELRDIVEASCERMFAGI
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
SRADLEQFTAILKNISTNIE
CHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRGYYDEISFDVNTTAKKMHLFLLRSIASYDVTPEQWSVLEGIEANEPISQKEIALWTKK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEEEECC
DTPTVNRIVDVLLRKELVVREVSTEDRRISLLSLTDKGRKETNELRDIVEASCERMFAGI
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
SRADLEQFTAILKNISTNIE
CHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA