Click here to switch to the map view.

The map label for this gene is 226225378

Identifier: 226225378

GI number: 226225378

Start: 2883905

End: 2884258

Strand: Reverse

Name: 226225378

Synonym: Lm4b_02801

Alternate gene names: NA

Gene position: 2884258-2883905 (Counterclockwise)

Preceding gene: 226225380

Following gene: 226225377

Centisome position: 99.02

GC content: 37.01

Gene sequence:

>354_bases
ATGGTTACGGCAATTCAGAAAGAGCAAGTGCGAACAGAGAAGAATGCTGCTTTTTTAACGAGTCGGCCAGAAGTGGATTA
TTTAGAGCGCGAAAGCTTTTTTATCACATTAAAAGATGCTATAAAGCGAGAATGGGTCGTTCGTTTAAAATATTTTCAAG
AAGCAGATGTATCTTCTCTGCGTTTAGCGCCATTTGAATATCCTTCCGCATTTCTTGGGCTTGGAGAGATTGAAACACAG
GACTTAGTGCCGCTAGAAATAGATATGTTAACGGAAGAAGTTATTTTGAAAGATATTGTTGGGTATGAGTATGTAATCGA
ATTTAGAGATATTATAGATGTGGAATTATTGTAG

Upstream 100 bases:

>100_bases
AAGCGCTAAACCTATTCAGGCTCTTATGAAAAAAATTTTTTAGCAAATTACTTGATTTTAAGAACGTTTGTTCGTATAAT
AAAGTTAAGAGGTGATAATG

Downstream 100 bases:

>100_bases
GAACAGTCGTTTATTCGACTGTTTTTCTTGTCAAAAAAGTAATCAGTATGTATAATGGTTGTTATGACAATTATTGTTAC
GACAATAGAAATGAGGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MVTAIQKEQVRTEKNAAFLTSRPEVDYLERESFFITLKDAIKREWVVRLKYFQEADVSSLRLAPFEYPSAFLGLGEIETQ
DLVPLEIDMLTEEVILKDIVGYEYVIEFRDIIDVELL

Sequences:

>Translated_117_residues
MVTAIQKEQVRTEKNAAFLTSRPEVDYLERESFFITLKDAIKREWVVRLKYFQEADVSSLRLAPFEYPSAFLGLGEIETQ
DLVPLEIDMLTEEVILKDIVGYEYVIEFRDIIDVELL
>Mature_117_residues
MVTAIQKEQVRTEKNAAFLTSRPEVDYLERESFFITLKDAIKREWVVRLKYFQEADVSSLRLAPFEYPSAFLGLGEIETQ
DLVPLEIDMLTEEVILKDIVGYEYVIEFRDIIDVELL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13694; Mature: 13694

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTAIQKEQVRTEKNAAFLTSRPEVDYLERESFFITLKDAIKREWVVRLKYFQEADVSSL
CCCCCCHHHHHHCCCCEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCE
RLAPFEYPSAFLGLGEIETQDLVPLEIDMLTEEVILKDIVGYEYVIEFRDIIDVELL
EECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHEEEHHHHEEEECC
>Mature Secondary Structure
MVTAIQKEQVRTEKNAAFLTSRPEVDYLERESFFITLKDAIKREWVVRLKYFQEADVSSL
CCCCCCHHHHHHCCCCEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCE
RLAPFEYPSAFLGLGEIETQDLVPLEIDMLTEEVILKDIVGYEYVIEFRDIIDVELL
EECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHEEEHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA